RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 ZNF100Q8IYN0 542 aa10.17□□□□□ -0.78
KARS-207ENST00000566560 ZNF808Q8N4W9 903 aaPredicted RBP10.17□□□□□ -0.78
KARS-207ENST00000566560 FAM26EQ8N5C1 309 aa10.17□□□□□ -0.78
KARS-207ENST00000566560 LRRC75AQ8NAA5 344 aa10.17□□□□□ -0.78
KARS-207ENST00000566560 CA5BP1Q8WTZ4 195 aa10.17□□□□□ -0.78
KARS-207ENST00000566560 ITLN2Q8WWU7 325 aaPredicted RBP10.17□□□□□ -0.78
KARS-207ENST00000566560 DNAJC9Q8WXX5 260 aa10.17□□□□□ -0.78
KARS-207ENST00000566560 APH1AQ96BI3 265 aa10.17□□□□□ -0.78
KARS-207ENST00000566560 STARD4Q96DR4 205 aa10.17□□□□□ -0.78
KARS-207ENST00000566560 GPX7Q96SL4 187 aaPredicted RBP10.17□□□□□ -0.78
KARS-207ENST00000566560 KATNB1Q9BVA0 655 aa10.17□□□□□ -0.78
KARS-207ENST00000566560 OPN3Q9H1Y3 402 aaPredicted RBP10.17□□□□□ -0.78
KARS-207ENST00000566560 PIGMQ9H3S5 423 aa10.17□□□□□ -0.78
KARS-207ENST00000566560 TBC1D23Q9NUY8 699 aa10.17□□□□□ -0.78
KARS-207ENST00000566560 MED29Q9NX70 200 aa10.17□□□□□ -0.78
KARS-207ENST00000566560 IL20RAQ9UHF4 553 aa10.17□□□□□ -0.78
KARS-207ENST00000566560 FLNCQ14315 2725 aa10.17□□□□□ -0.78
KARS-207ENST00000566560 NPIPB13A6NJU9 1138 aa10.16□□□□□ -0.78
KARS-207ENST00000566560 NPIPB4C9JG80 1138 aa10.16□□□□□ -0.78
KARS-207ENST00000566560 PDLIM1O00151 329 aa10.16□□□□□ -0.78
KARS-207ENST00000566560 IGHMP01871 453 aa10.16□□□□□ -0.78
KARS-207ENST00000566560 RNF224P0DH78 156 aa10.16□□□□□ -0.78
KARS-207ENST00000566560 CD8BP10966 210 aa10.16□□□□□ -0.78
KARS-207ENST00000566560 ZNF26P17031 533 aaPredicted RBP10.16□□□□□ -0.78
KARS-207ENST00000566560 AGAP20933 346 aa10.16□□□□□ -0.78
KARS-207ENST00000566560 OR3A2P47893 321 aa10.16□□□□□ -0.78
KARS-207ENST00000566560 SELENOPP49908 381 aa10.16□□□□□ -0.78
KARS-207ENST00000566560 BIDP55957 195 aa10.16□□□□□ -0.78
KARS-207ENST00000566560 FXYD6P3P58550 94 aa10.16□□□□□ -0.78
KARS-207ENST00000566560 CTXN1P60606 82 aa10.16□□□□□ -0.78
KARS-207ENST00000566560 ACKR1Q16570 336 aa10.16□□□□□ -0.78
KARS-207ENST00000566560 SLC36A3Q495N2 470 aa10.16□□□□□ -0.78
KARS-207ENST00000566560 CLEC12AQ5QGZ9 265 aa10.16□□□□□ -0.78
KARS-207ENST00000566560 CARD17Q5XLA6 110 aa10.16□□□□□ -0.78
KARS-207ENST00000566560 ANKRD34AQ69YU3 496 aa10.16□□□□□ -0.78
KARS-207ENST00000566560 KLHL17Q6TDP4 642 aa10.16□□□□□ -0.78
KARS-207ENST00000566560 CD300LDQ6UXZ3 194 aa10.16□□□□□ -0.78
KARS-207ENST00000566560 LUZP2Q86TE4 346 aa10.16□□□□□ -0.78
KARS-207ENST00000566560 KIF18BQ86Y91 864 aa10.16□□□□□ -0.78
KARS-207ENST00000566560 CLDN22Q8N7P3 220 aa10.16□□□□□ -0.78
KARS-207ENST00000566560 ZIC4Q8N9L1 334 aa10.16□□□□□ -0.78
KARS-207ENST00000566560 TEX47Q8TBZ9 253 aa10.16□□□□□ -0.78
KARS-207ENST00000566560 ASB10Q8WXI3 467 aa10.16□□□□□ -0.78
KARS-207ENST00000566560 SAMD8Q96LT4 415 aa10.16□□□□□ -0.78
KARS-207ENST00000566560 ADAD1Q96M93 576 aaKnown RBP10.16□□□□□ -0.78
KARS-207ENST00000566560 ALKBH3Q96Q83 286 aaPredicted RBP10.16□□□□□ -0.78
KARS-207ENST00000566560 CIB1Q99828 191 aa10.16□□□□□ -0.78
KARS-207ENST00000566560 EMC6Q9BV81 110 aa10.16□□□□□ -0.78
KARS-207ENST00000566560 PLA2G12AQ9BZM1 189 aa10.16□□□□□ -0.78
KARS-207ENST00000566560 UCK2Q9BZX2 261 aa10.16□□□□□ -0.78
KARS-207ENST00000566560 EGLN3Q9H6Z9 239 aa10.16□□□□□ -0.78
KARS-207ENST00000566560 PAPOLBQ9NRJ5 636 aaKnown RBP10.16□□□□□ -0.78
KARS-207ENST00000566560 KRT84Q9NSB2 600 aa10.16□□□□□ -0.78
KARS-207ENST00000566560 PARPBPQ9NWS1 579 aa10.16□□□□□ -0.78
KARS-207ENST00000566560 POFUT2Q9Y2G5 429 aa10.16□□□□□ -0.78
KARS-207ENST00000566560 RRP15Q9Y3B9 282 aaKnown RBP10.16□□□□□ -0.78
KARS-207ENST00000566560 ADAM18Q9Y3Q7 739 aa10.16□□□□□ -0.78
KARS-207ENST00000566560 ALPK2Q86TB3 2170 aa10.16□□□□□ -0.78
KARS-207ENST00000566560 SPTAN1Q13813 2472 aaKnown RBP10.16□□□□□ -0.78
KARS-207ENST00000566560 ZNF726A6NNF4 738 aa10.15□□□□□ -0.78
KARS-207ENST00000566560 H3BN98 237 aa10.15□□□□□ -0.78
KARS-207ENST00000566560 EI24O14681 340 aa10.15□□□□□ -0.78
KARS-207ENST00000566560 MSTNO14793 375 aa10.15□□□□□ -0.78
KARS-207ENST00000566560 PTP4A3O75365 173 aa10.15□□□□□ -0.78
KARS-207ENST00000566560 SLC43A1O75387 559 aa10.15□□□□□ -0.78
KARS-207ENST00000566560 CLDN14O95500 239 aa10.15□□□□□ -0.78
KARS-207ENST00000566560 PPP1R3DO95685 299 aa10.15□□□□□ -0.78
KARS-207ENST00000566560 BCL10O95999 233 aa10.15□□□□□ -0.78
KARS-207ENST00000566560 CGAP01215 116 aa10.15□□□□□ -0.78
KARS-207ENST00000566560 IGHV3-9P01782 118 aa10.15□□□□□ -0.78
KARS-207ENST00000566560 CD14P08571 375 aa10.15□□□□□ -0.78
KARS-207ENST00000566560 IGFBP5P24593 272 aa10.15□□□□□ -0.78
KARS-207ENST00000566560 EDNRAP25101 427 aa10.15□□□□□ -0.78
KARS-207ENST00000566560 NTF4P34130 210 aa10.15□□□□□ -0.78
KARS-207ENST00000566560 ASCL1P50553 236 aa10.15□□□□□ -0.78
KARS-207ENST00000566560 ERVK-25P63136 954 aa10.15□□□□□ -0.78
KARS-207ENST00000566560 PPP2R2BQ00005 443 aa10.15□□□□□ -0.78
KARS-207ENST00000566560 SRSF1Q07955 248 aaKnown RBP eCLIP10.15□□□□□ -0.78
KARS-207ENST00000566560 COX10Q12887 443 aa10.15□□□□□ -0.78
KARS-207ENST00000566560 CAMK2DQ13557 499 aa10.15□□□□□ -0.78
KARS-207ENST00000566560 CDSNQ15517 529 aa10.15□□□□□ -0.78
KARS-207ENST00000566560 TRIP10Q15642 601 aa10.15□□□□□ -0.78
KARS-207ENST00000566560 RFX4Q33E94 735 aa10.15□□□□□ -0.78
KARS-207ENST00000566560 SAMD5Q5TGI4 173 aa10.15□□□□□ -0.78
KARS-207ENST00000566560 FAM205BPQ63HN1 556 aa10.15□□□□□ -0.78
KARS-207ENST00000566560 XKRXQ6PP77 449 aa10.15□□□□□ -0.78
KARS-207ENST00000566560 DPY19L2P2Q6ZN68 376 aa10.15□□□□□ -0.78
KARS-207ENST00000566560 TMEM123Q8N131 208 aa10.15□□□□□ -0.78
KARS-207ENST00000566560 NOXO1Q8NFA2 376 aa10.15□□□□□ -0.78
KARS-207ENST00000566560 LILRB4Q8NHJ6 448 aa10.15□□□□□ -0.78
KARS-207ENST00000566560 SSC4DQ8WTU2 575 aa10.15□□□□□ -0.78
KARS-207ENST00000566560 EME1Q96AY2 570 aa10.15□□□□□ -0.78
KARS-207ENST00000566560 TXNDC15Q96J42 360 aa10.15□□□□□ -0.78
KARS-207ENST00000566560 ZNF570Q96NI8 536 aa10.15□□□□□ -0.78
KARS-207ENST00000566560 TSPAN32Q96QS1 320 aa10.15□□□□□ -0.78
KARS-207ENST00000566560 OR2M2Q96R28 347 aa10.15□□□□□ -0.78
KARS-207ENST00000566560 RBM4BQ9BQ04 359 aaKnown RBP10.15□□□□□ -0.78
KARS-207ENST00000566560 C9orf16Q9BUW7 83 aa10.15□□□□□ -0.78
KARS-207ENST00000566560 IFT27Q9BW83 186 aa10.15□□□□□ -0.78
KARS-207ENST00000566560 RBM4Q9BWF3 364 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms