RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 TNXAQ16473 311 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 DGUOKQ16854 277 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 TRMT5Q32P41 509 aaKnown RBP2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 CLEC6AQ6EIG7 209 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 ADNP2Q6IQ32 1131 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 SPESP1Q6UW49 350 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 LCLAT1Q6UWP7 414 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 Q6ZSR9 355 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 ABHD12BQ7Z5M8 362 aaPredicted RBP2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 CMC1Q7Z7K0 106 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 NFE4Q86UQ8 179 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 BOD1L2Q8IYS8 172 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 CIARTQ8N365 385 aaPredicted RBP2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 C17orf78Q8N4C9 275 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 RFLNBQ8N5W9 214 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 ZNF491Q8N8L2 437 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 OR10V1Q8NGI7 309 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 OR56B4Q8NH76 319 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 NUBPLQ8TB37 319 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 FNDC8Q8TC99 324 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 ACER1Q8TDN7 264 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 PYROXD1Q8WU10 500 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 BAALCQ8WXS3 180 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 GTF3AQ92664 365 aaKnown RBP2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 PSMG2Q969U7 264 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 ITCHQ96J02 903 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 ZNF670Q9BS34 389 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 OSBPL10Q9BXB5 764 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 PITPNM3Q9BZ71 974 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 ULBP2Q9BZM5 246 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 ZYG11BQ9C0D3 744 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 ACTR6Q9GZN1 396 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 WDR13Q9H1Z4 485 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 ZNF385DQ9H6B1 395 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 RNF167Q9H6Y7 350 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 PSTPIP2Q9H939 334 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 ZNF334Q9HCZ1 680 aaPredicted RBP2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 WRAP73Q9P2S5 460 aaPredicted RBP2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 CIDEBQ9UHD4 219 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 RSPH14Q9UHP6 348 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 ERVW-1Q9UQF0 538 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 URGCP-MRPS24S4R325 110 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 ARHGEF12Q9NZN5 1544 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 FER1L5A0AVI2 2057 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 TCOF1Q13428 1488 aaKnown RBP2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 PHLPP1O60346 1717 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 POLR1AO95602 1720 aaPredicted RBP2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 SOGA1O94964 1423 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 FAM135BQ49AJ0 1406 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 ADCY9O60503 1353 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 MROH7Q68CQ1 1323 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 EFCAB5A4FU69 1503 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 TRGV8A0A0C4DH27 118 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 PSMB11A5LHX3 300 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 FAM231BA6NCW3 169 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 C15orf61A6NNL5 157 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 K7EQD1 137 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 CDC7O00311 574 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 CCL21O00585 134 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 COCHO43405 550 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 MPDU1O75352 247 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 PSIP1O75475 530 aaKnown RBP2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 EEDO75530 441 aaKnown RBP2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 ATP5HO75947 161 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 LYPD3O95274 346 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 PLEKHA8P1O95397 391 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 NADKO95544 446 aaPredicted RBP2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 TOMM40O96008 361 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 CST4P01036 141 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 SERPINA5P05154 406 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 KLK1P06870 262 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 PRSS1P07477 247 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 CD55P08174 381 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 PVRP15151 417 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 MYOGP15173 224 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 ATP6V1B2P21281 511 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 CALCRP30988 508 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 HMGCLP35914 325 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 RFC3P40938 356 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 AQP2P41181 271 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 ELK3P41970 407 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 GPM6AP51674 278 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 ARHGDIBP52566 201 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 BIDP55957 195 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 GSCP56915 257 aaPredicted RBP2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 SNRPD1P62314 119 aaKnown RBP2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 MADCAM1Q13477 382 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 SLC10A1Q14973 349 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 TRAM2Q15035 370 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 PON2Q15165 354 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 PSMD5Q16401 504 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 PSG3Q16557 428 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 UPP1Q16831 310 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 IZUMO4Q1ZYL8 232 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 RPEL1Q2QD12 228 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 C14orf28Q4W4Y0 310 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 PRMT9Q6P2P2 845 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 Q6ZN92 141 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 ZNF600Q6ZNG1 722 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms