RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 KLF6Q99612 283 aaPredicted RBP1□□□□□ -2.25
SMG1-212ENST00000566328 FERMT1Q9BQL6 677 aa1□□□□□ -2.25
SMG1-212ENST00000566328 ZNF559Q9BR84 538 aa1□□□□□ -2.25
SMG1-212ENST00000566328 TRIM4Q9C037 500 aa1□□□□□ -2.25
SMG1-212ENST00000566328 ABCG4Q9H172 646 aa1□□□□□ -2.25
SMG1-212ENST00000566328 FAM96AQ9H5X1 160 aa1□□□□□ -2.25
SMG1-212ENST00000566328 DHX35Q9H5Z1 703 aaKnown RBP1□□□□□ -2.25
SMG1-212ENST00000566328 ZDHHC6Q9H6R6 413 aa1□□□□□ -2.25
SMG1-212ENST00000566328 SYNDIG1Q9H7V2 258 aa1□□□□□ -2.25
SMG1-212ENST00000566328 UGT1A7Q9HAW7 530 aa1□□□□□ -2.25
SMG1-212ENST00000566328 UGT1A10Q9HAW8 530 aa1□□□□□ -2.25
SMG1-212ENST00000566328 UGT1A8Q9HAW9 530 aa1□□□□□ -2.25
SMG1-212ENST00000566328 MAGEF1Q9HAY2 307 aa1□□□□□ -2.25
SMG1-212ENST00000566328 PNPLA3Q9NST1 481 aa1□□□□□ -2.25
SMG1-212ENST00000566328 RMND1Q9NWS8 449 aa1□□□□□ -2.25
SMG1-212ENST00000566328 TECRQ9NZ01 308 aaKnown RBP1□□□□□ -2.25
SMG1-212ENST00000566328 CD274Q9NZQ7 290 aa1□□□□□ -2.25
SMG1-212ENST00000566328 SEPT10Q9P0V9 454 aa1□□□□□ -2.25
SMG1-212ENST00000566328 IFNKQ9P0W0 207 aa1□□□□□ -2.25
SMG1-212ENST00000566328 NFKBIL1Q9UBC1 381 aaPredicted RBP1□□□□□ -2.25
SMG1-212ENST00000566328 SLC23A2Q9UGH3 650 aa1□□□□□ -2.25
SMG1-212ENST00000566328 LCMT1Q9UIC8 334 aa1□□□□□ -2.25
SMG1-212ENST00000566328 HOOK1Q9UJC3 728 aaKnown RBP1□□□□□ -2.25
SMG1-212ENST00000566328 STOML2Q9UJZ1 356 aa1□□□□□ -2.25
SMG1-212ENST00000566328 ZNF225Q9UK10 706 aa1□□□□□ -2.25
SMG1-212ENST00000566328 ANGPTL2Q9UKU9 493 aa1□□□□□ -2.25
SMG1-212ENST00000566328 KIAA1257Q9ULG3 409 aa1□□□□□ -2.25
SMG1-212ENST00000566328 RPH3AQ9Y2J0 694 aaPredicted RBP1□□□□□ -2.25
SMG1-212ENST00000566328 HEY1Q9Y5J3 304 aa1□□□□□ -2.25
SMG1-212ENST00000566328 ATP6V1DQ9Y5K8 247 aa1□□□□□ -2.25
SMG1-212ENST00000566328 FADS3Q9Y5Q0 445 aa1□□□□□ -2.25
SMG1-212ENST00000566328 CDH10Q9Y6N8 788 aa1□□□□□ -2.25
SMG1-212ENST00000566328 CACNA1AO00555 2505 aa1□□□□□ -2.25
SMG1-212ENST00000566328 KIAA1549LQ6ZVL6 1849 aa1□□□□□ -2.25
SMG1-212ENST00000566328 TNRC6BQ9UPQ9 1833 aaKnown RBP1□□□□□ -2.25
SMG1-212ENST00000566328 PCNX1Q96RV3 2341 aa1□□□□□ -2.25
SMG1-212ENST00000566328 PTPRQQ9UMZ3 2332 aa1□□□□□ -2.25
SMG1-212ENST00000566328 FBN3Q75N90 2809 aa1□□□□□ -2.25
SMG1-212ENST00000566328 SETXQ7Z333 2677 aaKnown RBP1□□□□□ -2.25
SMG1-212ENST00000566328 GCN1Q92616 2671 aaKnown RBP1□□□□□ -2.25
SMG1-212ENST00000566328 ZGRF1Q86YA3 2104 aa1□□□□□ -2.25
SMG1-212ENST00000566328 FAM208BQ5VWN6 2430 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 NYNRINQ9P2P1 1898 aaKnown RBP0.99□□□□□ -2.25
SMG1-212ENST00000566328 ICE1Q9Y2F5 2266 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 DOPEY2Q9Y3R5 2298 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 CENPEQ02224 2701 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 CFAP46Q8IYW2 2715 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 FLNBO75369 2602 aaKnown RBP0.99□□□□□ -2.25
SMG1-212ENST00000566328 SPTY2D1-AS1A0A0U1RR47 76 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 HTR3EA5X5Y0 456 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 KRT87PA6NCN2 255 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 OR52A4PA6NMU1 304 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 DHRS7CA6NNS2 312 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 C10orf142B7Z368 130 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 PRAMEF26H0Y7S4 382 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 H7C0S8 307 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 HCRTR1O43613 425 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 DUX1O43812 170 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 HSF2BPO75031 334 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 DNAJB6O75190 326 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 CLDN11O75508 207 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 SNRNP200O75643 2136 aaKnown RBP0.99□□□□□ -2.25
SMG1-212ENST00000566328 PIAS1O75925 651 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 TM7SF2O76062 418 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 FGFR1OPO95684 399 aaKnown RBP0.99□□□□□ -2.25
SMG1-212ENST00000566328 GNA14O95837 355 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 AGTP01019 485 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 EPOP01588 193 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 STATHP02808 62 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 CSF2P04141 144 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 PCCBP05166 539 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 SLC2A3P11169 496 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 CTSEP14091 401 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 CSRP1P21291 193 aaKnown RBP0.99□□□□□ -2.25
SMG1-212ENST00000566328 F8A1P23610 371 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 CD1CP29017 333 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 SDC4P31431 198 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 CASP14P31944 242 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 RDXP35241 583 aaKnown RBP0.99□□□□□ -2.25
SMG1-212ENST00000566328 ANP32AP39687 249 aaKnown RBP0.99□□□□□ -2.25
SMG1-212ENST00000566328 CD86P42081 329 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 GRIA1P42261 906 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 ACADSBP45954 432 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 NSFP46459 744 aaKnown RBP0.99□□□□□ -2.25
SMG1-212ENST00000566328 GNPDA1P46926 289 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 MARCKSL1P49006 195 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 ACADVLP49748 655 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 NPY4RP50391 375 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 SERPINH1P50454 418 aaKnown RBP0.99□□□□□ -2.25
SMG1-212ENST00000566328 CDH6P55285 790 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 TPI1P60174 286 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 SRP54P61011 504 aaKnown RBP0.99□□□□□ -2.25
SMG1-212ENST00000566328 RHOAP61586 193 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 RPS21P63220 83 aaKnown RBP0.99□□□□□ -2.25
SMG1-212ENST00000566328 GBE1Q04446 702 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 SLC34A1Q06495 639 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 KLHL30Q0D2K2 578 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 AP1B1Q10567 949 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 SLAQ13239 276 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 SNX1Q13596 522 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms