RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 WDR88Q6ZMY6 472 aa17.23■□□□□ 0.35
CLN6-206ENST00000565471 CCDC80Q76M96 950 aa17.23■□□□□ 0.35
CLN6-206ENST00000565471 SLC46A3Q7Z3Q1 461 aa17.23■□□□□ 0.35
CLN6-206ENST00000565471 OR4D11Q8NGI4 311 aa17.23■□□□□ 0.35
CLN6-206ENST00000565471 OR6N1Q8NGY5 312 aa17.23■□□□□ 0.35
CLN6-206ENST00000565471 VANGL1Q8TAA9 524 aaPredicted RBP17.23■□□□□ 0.35
CLN6-206ENST00000565471 SH3GL1Q99961 368 aa17.23■□□□□ 0.35
CLN6-206ENST00000565471 ZNF426Q9BUY5 554 aa17.23■□□□□ 0.35
CLN6-206ENST00000565471 TMEM120AQ9BXJ8 343 aa17.23■□□□□ 0.35
CLN6-206ENST00000565471 ULBP2Q9BZM5 246 aa17.23■□□□□ 0.35
CLN6-206ENST00000565471 SLC19A3Q9BZV2 496 aa17.23■□□□□ 0.35
CLN6-206ENST00000565471 B3GNT2Q9NY97 397 aa17.23■□□□□ 0.35
CLN6-206ENST00000565471 VWC2LB2RUY7 222 aa17.22■□□□□ 0.35
CLN6-206ENST00000565471 SASH3O75995 380 aa17.22■□□□□ 0.35
CLN6-206ENST00000565471 THY1P04216 161 aa17.22■□□□□ 0.35
CLN6-206ENST00000565471 VIMP08670 466 aaKnown RBP17.22■□□□□ 0.35
CLN6-206ENST00000565471 ADORA3P0DMS8 318 aa17.22■□□□□ 0.35
CLN6-206ENST00000565471 USF1P22415 310 aaPredicted RBP17.22■□□□□ 0.35
CLN6-206ENST00000565471 CAPZA2P47755 286 aa17.22■□□□□ 0.35
CLN6-206ENST00000565471 ZP4Q12836 540 aa17.22■□□□□ 0.35
CLN6-206ENST00000565471 CAMK2DQ13557 499 aa17.22■□□□□ 0.35
CLN6-206ENST00000565471 NANOGP8Q6NSW7 305 aa17.22■□□□□ 0.35
CLN6-206ENST00000565471 ZNF813Q6ZN06 617 aa17.22■□□□□ 0.35
CLN6-206ENST00000565471 RBM45Q8IUH3 476 aaKnown RBP17.22■□□□□ 0.35
CLN6-206ENST00000565471 WDFY1Q8IWB7 410 aa17.22■□□□□ 0.35
CLN6-206ENST00000565471 MDFIQ99750 246 aa17.22■□□□□ 0.35
CLN6-206ENST00000565471 NANOGQ9H9S0 305 aa17.22■□□□□ 0.35
CLN6-206ENST00000565471 POFUT2Q9Y2G5 429 aa17.22■□□□□ 0.35
CLN6-206ENST00000565471 YLPM1P49750 1951 aaKnown RBP17.22■□□□□ 0.35
CLN6-206ENST00000565471 OR6A2O95222 327 aa17.21■□□□□ 0.35
CLN6-206ENST00000565471 NPPAP01160 153 aa17.21■□□□□ 0.35
CLN6-206ENST00000565471 IFNGR1P15260 489 aa17.21■□□□□ 0.35
CLN6-206ENST00000565471 NPR2P20594 1047 aa17.21■□□□□ 0.35
CLN6-206ENST00000565471 THBS4P35443 961 aa17.21■□□□□ 0.35
CLN6-206ENST00000565471 CSNK1A1P48729 337 aa17.21■□□□□ 0.35
CLN6-206ENST00000565471 CRYBA2P53672 197 aa17.21■□□□□ 0.35
CLN6-206ENST00000565471 GSG1Q2KHT4 349 aa17.21■□□□□ 0.35
CLN6-206ENST00000565471 TSPYL5Q86VY4 417 aaPredicted RBP17.21■□□□□ 0.35
CLN6-206ENST00000565471 OR8J3Q8NGG0 315 aa17.21■□□□□ 0.35
CLN6-206ENST00000565471 OR6X1Q8NH79 312 aa17.21■□□□□ 0.35
CLN6-206ENST00000565471 FOXB1Q99853 325 aa17.21■□□□□ 0.35
CLN6-206ENST00000565471 VRK1Q99986 396 aaPredicted RBP17.21■□□□□ 0.35
CLN6-206ENST00000565471 PIMREGQ9BSJ6 248 aa17.21■□□□□ 0.35
CLN6-206ENST00000565471 DENND2DQ9H6A0 471 aaPredicted RBP17.21■□□□□ 0.35
CLN6-206ENST00000565471 NANSQ9NR45 359 aa17.21■□□□□ 0.35
CLN6-206ENST00000565471 TMEM160Q9NX00 188 aa17.21■□□□□ 0.35
CLN6-206ENST00000565471 ZNF229Q9UJW7 825 aa17.21■□□□□ 0.35
CLN6-206ENST00000565471 SLC7A7Q9UM01 511 aa17.21■□□□□ 0.35
CLN6-206ENST00000565471 LOC390937A0A1W2PQ73 354 aa17.2■□□□□ 0.34
CLN6-206ENST00000565471 C11orf98E9PRG8 122 aa17.2■□□□□ 0.34
CLN6-206ENST00000565471 FXYD1O00168 92 aa17.2■□□□□ 0.34
CLN6-206ENST00000565471 SERPINI2O75830 405 aa17.2■□□□□ 0.34
CLN6-206ENST00000565471 CH25HO95992 272 aa17.2■□□□□ 0.34
CLN6-206ENST00000565471 HLA-HP01893 362 aa17.2■□□□□ 0.34
CLN6-206ENST00000565471 TROVE2P10155 538 aaKnown RBP eCLIP17.2■□□□□ 0.34
CLN6-206ENST00000565471 NR4A2P43354 598 aa17.2■□□□□ 0.34
CLN6-206ENST00000565471 BIDP55957 195 aa17.2■□□□□ 0.34
CLN6-206ENST00000565471 LSM11P83369 360 aaKnown RBP eCLIP17.2■□□□□ 0.34
CLN6-206ENST00000565471 CHRFAM7AQ494W8 412 aa17.2■□□□□ 0.34
CLN6-206ENST00000565471 SLC35D2Q76EJ3 337 aa17.2■□□□□ 0.34
CLN6-206ENST00000565471 CALHM3Q86XJ0 350 aa17.2■□□□□ 0.34
CLN6-206ENST00000565471 ANKS4BQ8N8V4 417 aa17.2■□□□□ 0.34
CLN6-206ENST00000565471 LRRC58Q96CX6 371 aa17.2■□□□□ 0.34
CLN6-206ENST00000565471 ZNF75AQ96N20 296 aa17.2■□□□□ 0.34
CLN6-206ENST00000565471 DOK1Q99704 481 aa17.2■□□□□ 0.34
CLN6-206ENST00000565471 RAB1BQ9H0U4 201 aa17.2■□□□□ 0.34
CLN6-206ENST00000565471 NOX3Q9HBY0 568 aa17.2■□□□□ 0.34
CLN6-206ENST00000565471 TAS2R5Q9NYW4 299 aa17.2■□□□□ 0.34
CLN6-206ENST00000565471 BBIP1A8MTZ0 92 aa17.19■□□□□ 0.34
CLN6-206ENST00000565471 hCG_2039718K7EN88 272 aa17.19■□□□□ 0.34
CLN6-206ENST00000565471 ASAH2BP0C7U1 165 aa17.19■□□□□ 0.34
CLN6-206ENST00000565471 CD79AP11912 226 aa17.19■□□□□ 0.34
CLN6-206ENST00000565471 B4GALT1P15291 398 aa17.19■□□□□ 0.34
CLN6-206ENST00000565471 SNTB2Q13425 540 aaKnown RBP17.19■□□□□ 0.34
CLN6-206ENST00000565471 DAG1Q14118 895 aa17.19■□□□□ 0.34
CLN6-206ENST00000565471 RABL3Q5HYI8 236 aa17.19■□□□□ 0.34
CLN6-206ENST00000565471 CYB5R2Q6BCY4 276 aa17.19■□□□□ 0.34
CLN6-206ENST00000565471 ERICH5Q6P6B1 374 aa17.19■□□□□ 0.34
CLN6-206ENST00000565471 TMEM54Q969K7 222 aa17.19■□□□□ 0.34
CLN6-206ENST00000565471 ECSITQ9BQ95 431 aa17.19■□□□□ 0.34
CLN6-206ENST00000565471 ZNF224Q9NZL3 707 aa17.19■□□□□ 0.34
CLN6-206ENST00000565471 FBXL3Q9UKT7 428 aa17.19■□□□□ 0.34
CLN6-206ENST00000565471 BAG5Q9UL15 447 aa17.19■□□□□ 0.34
CLN6-206ENST00000565471 UBL3O95164 117 aa17.18■□□□□ 0.34
CLN6-206ENST00000565471 IFNA2P01563 188 aa17.18■□□□□ 0.34
CLN6-206ENST00000565471 ERCC1P07992 297 aaPredicted RBP17.18■□□□□ 0.34
CLN6-206ENST00000565471 IGHV4-31P0DP07 118 aa17.18■□□□□ 0.34
CLN6-206ENST00000565471 ZNF14P17017 642 aaPredicted RBP17.18■□□□□ 0.34
CLN6-206ENST00000565471 NR4A1P22736 598 aa17.18■□□□□ 0.34
CLN6-206ENST00000565471 GZMKP49863 264 aa17.18■□□□□ 0.34
CLN6-206ENST00000565471 ARFIP2P53365 341 aa17.18■□□□□ 0.34
CLN6-206ENST00000565471 KLF10Q13118 480 aa17.18■□□□□ 0.34
CLN6-206ENST00000565471 MAPRE2Q15555 327 aa17.18■□□□□ 0.34
CLN6-206ENST00000565471 MMEL1Q495T6 779 aa17.18■□□□□ 0.34
CLN6-206ENST00000565471 PODNL1Q6PEZ8 512 aa17.18■□□□□ 0.34
CLN6-206ENST00000565471 PIWIL3Q7Z3Z3 882 aaKnown RBP17.18■□□□□ 0.34
CLN6-206ENST00000565471 SPATA21Q7Z572 469 aa17.18■□□□□ 0.34
CLN6-206ENST00000565471 CARM1Q86X55 608 aa17.18■□□□□ 0.34
CLN6-206ENST00000565471 SVOPLQ8N434 492 aa17.18■□□□□ 0.34
CLN6-206ENST00000565471 NEU4Q8WWR8 484 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms