RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 KRT80Q6KB66 452 aa7.72□□□□□ -1.17
VPS9D1-205ENST00000565452 WDFY1Q8IWB7 410 aa7.72□□□□□ -1.17
VPS9D1-205ENST00000565452 CLECL1Q8IZS7 167 aa7.72□□□□□ -1.17
VPS9D1-205ENST00000565452 CCDC197Q8NCU1 140 aa7.72□□□□□ -1.17
VPS9D1-205ENST00000565452 BCAS4Q8TDM0 211 aa7.72□□□□□ -1.17
VPS9D1-205ENST00000565452 ST7LQ8TDW4 575 aa7.72□□□□□ -1.17
VPS9D1-205ENST00000565452 ADAMTS15Q8TE58 950 aa7.72□□□□□ -1.17
VPS9D1-205ENST00000565452 OIT3Q8WWZ8 545 aa7.72□□□□□ -1.17
VPS9D1-205ENST00000565452 JADE3Q92613 823 aa7.72□□□□□ -1.17
VPS9D1-205ENST00000565452 VPS33AQ96AX1 596 aa7.72□□□□□ -1.17
VPS9D1-205ENST00000565452 TMEM45BQ96B21 275 aa7.72□□□□□ -1.17
VPS9D1-205ENST00000565452 ZNF524Q96C55 264 aa7.72□□□□□ -1.17
VPS9D1-205ENST00000565452 GIMAP5Q96F15 307 aa7.72□□□□□ -1.17
VPS9D1-205ENST00000565452 TIMD4Q96H15 378 aa7.72□□□□□ -1.17
VPS9D1-205ENST00000565452 SH3GL1Q99961 368 aa7.72□□□□□ -1.17
VPS9D1-205ENST00000565452 THUMPD3Q9BV44 507 aaKnown RBP7.72□□□□□ -1.17
VPS9D1-205ENST00000565452 CCDC106Q9BWC9 280 aa7.72□□□□□ -1.17
VPS9D1-205ENST00000565452 MRPL37Q9BZE1 423 aaKnown RBP7.72□□□□□ -1.17
VPS9D1-205ENST00000565452 NMUR2Q9GZQ4 415 aa7.72□□□□□ -1.17
VPS9D1-205ENST00000565452 MYLK2Q9H1R3 596 aa7.72□□□□□ -1.17
VPS9D1-205ENST00000565452 EFCAB1Q9HAE3 211 aa7.72□□□□□ -1.17
VPS9D1-205ENST00000565452 CRLF2Q9HC73 371 aa7.72□□□□□ -1.17
VPS9D1-205ENST00000565452 EXD2Q9NVH0 621 aa7.72□□□□□ -1.17
VPS9D1-205ENST00000565452 GPATCH2Q9NW75 528 aa7.72□□□□□ -1.17
VPS9D1-205ENST00000565452 GID8Q9NWU2 228 aa7.72□□□□□ -1.17
VPS9D1-205ENST00000565452 TMEM181Q9P2C4 612 aa7.72□□□□□ -1.17
VPS9D1-205ENST00000565452 GPR160Q9UJ42 338 aa7.72□□□□□ -1.17
VPS9D1-205ENST00000565452 ZNF346Q9UL40 294 aaKnown RBP7.72□□□□□ -1.17
VPS9D1-205ENST00000565452 AP3M1Q9Y2T2 418 aa7.72□□□□□ -1.17
VPS9D1-205ENST00000565452 WNK2Q9Y3S1 2297 aa7.72□□□□□ -1.17
VPS9D1-205ENST00000565452 A0A096LPE4 126 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 RNF103-CHMP3A0A140T963 221 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 A0A1W2PPZ6 126 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 C5orf63A6NC05 138 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 CLIC1O00299 241 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 NDUFAB1O14561 156 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 CDC14BO60729 498 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 FOXH1O75593 365 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 CYP7B1O75881 506 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 SEC14L2O76054 403 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 NDUFA7O95182 113 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 GPANK1O95872 356 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 UBL4AP11441 157 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 GLRXP35754 106 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 CRYBB2P43320 205 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 RNF144AP50876 292 aaPredicted RBP7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 MNAT1P51948 309 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 TUBA1BP68363 451 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 TUBA4AP68366 448 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 GNA13Q14344 377 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 NDUFAF6Q330K2 333 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 GLIPR1L2Q4G1C9 344 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 C6orf10Q5SRN2 563 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 ATAD3BQ5T9A4 648 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 RUSC1-AS1Q66K80 236 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 TUBA1AQ71U36 451 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 SZRD1Q7Z422 152 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 ANKRD46Q86W74 232 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 CCDC36Q8IYA8 594 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 ZNF614Q8N883 585 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 PPP1R14AQ96A00 147 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 ROPN1LQ96C74 230 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 C16orf58Q96GQ5 468 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 SLC35G5Q96KT7 338 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 SYT3Q9BQG1 590 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 SLC35A5Q9BS91 424 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 LAT2Q9GZY6 243 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 PAIP1Q9H074 479 aaKnown RBP7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 PIF1Q9H611 641 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 SEC61A2Q9H9S3 476 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 TPT1P8Q9HAU6 139 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 POLE3Q9NRF9 147 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 CHRNA9Q9UGM1 479 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 PRDM4Q9UKN5 801 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 RNF114Q9Y508 228 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 BIRC6Q9NR09 4857 aa7.71□□□□□ -1.18
VPS9D1-205ENST00000565452 LOC100653049A0A140TA62 436 aa7.7□□□□□ -1.18
VPS9D1-205ENST00000565452 TMEM247A6NEH6 219 aa7.7□□□□□ -1.18
VPS9D1-205ENST00000565452 DNAJA2O60884 412 aa7.7□□□□□ -1.18
VPS9D1-205ENST00000565452 KRT34O76011 436 aa7.7□□□□□ -1.18
VPS9D1-205ENST00000565452 TSPAN15O95858 294 aa7.7□□□□□ -1.18
VPS9D1-205ENST00000565452 CELA3BP08861 270 aa7.7□□□□□ -1.18
VPS9D1-205ENST00000565452 CSF1P09603 554 aa7.7□□□□□ -1.18
VPS9D1-205ENST00000565452 COX4I1P13073 169 aa7.7□□□□□ -1.18
VPS9D1-205ENST00000565452 GPX2P18283 190 aa7.7□□□□□ -1.18
VPS9D1-205ENST00000565452 EFNA1P20827 205 aaPredicted RBP7.7□□□□□ -1.18
VPS9D1-205ENST00000565452 SOAT1P35610 550 aa7.7□□□□□ -1.18
VPS9D1-205ENST00000565452 SH3BGRP55822 239 aaPredicted RBP7.7□□□□□ -1.18
VPS9D1-205ENST00000565452 SELENOVP59797 346 aa7.7□□□□□ -1.18
VPS9D1-205ENST00000565452 RPS23P62266 143 aaKnown RBP7.7□□□□□ -1.18
VPS9D1-205ENST00000565452 ZNF154Q13106 437 aa7.7□□□□□ -1.18
VPS9D1-205ENST00000565452 LASP1Q14847 261 aaKnown RBP7.7□□□□□ -1.18
VPS9D1-205ENST00000565452 C2orf68Q2NKX9 166 aa7.7□□□□□ -1.18
VPS9D1-205ENST00000565452 PCGF3Q3KNV8 242 aa7.7□□□□□ -1.18
VPS9D1-205ENST00000565452 ARHGAP11BQ3KRB8 267 aa7.7□□□□□ -1.18
VPS9D1-205ENST00000565452 KLF17Q5JT82 389 aaPredicted RBP7.7□□□□□ -1.18
VPS9D1-205ENST00000565452 PAGE3Q5JUK9 113 aa7.7□□□□□ -1.18
VPS9D1-205ENST00000565452 FAM205BPQ63HN1 556 aa7.7□□□□□ -1.18
VPS9D1-205ENST00000565452 TMEM154Q6P9G4 183 aa7.7□□□□□ -1.18
VPS9D1-205ENST00000565452 DLEU7Q6UYE1 221 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms