RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 FRMD6Q96NE9 622 aa11.4□□□□□ -0.58
NSMCE1-208ENST00000565070 CNN2Q99439 309 aaKnown RBP11.4□□□□□ -0.58
NSMCE1-208ENST00000565070 PTDSS2Q9BVG9 487 aa11.4□□□□□ -0.58
NSMCE1-208ENST00000565070 TRIM36Q9NQ86 728 aa11.4□□□□□ -0.58
NSMCE1-208ENST00000565070 SNTG1Q9NSN8 517 aa11.4□□□□□ -0.58
NSMCE1-208ENST00000565070 QPCTLQ9NXS2 382 aa11.4□□□□□ -0.58
NSMCE1-208ENST00000565070 PPP4R1LQ9P1A2 415 aa11.4□□□□□ -0.58
NSMCE1-208ENST00000565070 GSTK1Q9Y2Q3 226 aa11.4□□□□□ -0.58
NSMCE1-208ENST00000565070 ZFHX4Q86UP3 3567 aa11.4□□□□□ -0.58
NSMCE1-208ENST00000565070 TEX13CA0A0J9YWL9 993 aa11.4□□□□□ -0.59
NSMCE1-208ENST00000565070 IQCMA0A1B0GVH7 501 aa11.4□□□□□ -0.59
NSMCE1-208ENST00000565070 NME2P1O60361 137 aa11.4□□□□□ -0.59
NSMCE1-208ENST00000565070 WISP1O95388 367 aa11.4□□□□□ -0.59
NSMCE1-208ENST00000565070 F10P00742 488 aa11.4□□□□□ -0.59
NSMCE1-208ENST00000565070 MT-ATP6P00846 226 aa11.4□□□□□ -0.59
NSMCE1-208ENST00000565070 SP1P08047 785 aa11.4□□□□□ -0.59
NSMCE1-208ENST00000565070 OR2T7P0C7T2 308 aa11.4□□□□□ -0.59
NSMCE1-208ENST00000565070 SPI1P17947 270 aa11.4□□□□□ -0.59
NSMCE1-208ENST00000565070 CNR1P21554 472 aa11.4□□□□□ -0.59
NSMCE1-208ENST00000565070 NME2P22392 152 aa11.4□□□□□ -0.59
NSMCE1-208ENST00000565070 HTR3AP46098 478 aa11.4□□□□□ -0.59
NSMCE1-208ENST00000565070 RPS5P46782 204 aaKnown RBP11.4□□□□□ -0.59
NSMCE1-208ENST00000565070 SLC25A1P53007 311 aa11.4□□□□□ -0.59
NSMCE1-208ENST00000565070 SUMO3P55854 103 aaPredicted RBP11.4□□□□□ -0.59
NSMCE1-208ENST00000565070 COL28A1Q2UY09 1125 aa11.4□□□□□ -0.59
NSMCE1-208ENST00000565070 SPINK14Q6IE38 97 aa11.4□□□□□ -0.59
NSMCE1-208ENST00000565070 SLC25A25Q6KCM7 469 aa11.4□□□□□ -0.59
NSMCE1-208ENST00000565070 DCDC5Q6ZRR9 648 aa11.4□□□□□ -0.59
NSMCE1-208ENST00000565070 MDGA2Q7Z553 956 aa11.4□□□□□ -0.59
NSMCE1-208ENST00000565070 NANOGNBQ7Z5D8 188 aa11.4□□□□□ -0.59
NSMCE1-208ENST00000565070 CCDC190Q86UF4 302 aa11.4□□□□□ -0.59
NSMCE1-208ENST00000565070 ZNF227Q86WZ6 799 aa11.4□□□□□ -0.59
NSMCE1-208ENST00000565070 ADGRG3Q86Y34 549 aa11.4□□□□□ -0.59
NSMCE1-208ENST00000565070 OR2T27Q8NH04 317 aa11.4□□□□□ -0.59
NSMCE1-208ENST00000565070 ZPLD1Q8TCW7 415 aa11.4□□□□□ -0.59
NSMCE1-208ENST00000565070 ZMYND19Q96E35 227 aaPredicted RBP11.4□□□□□ -0.59
NSMCE1-208ENST00000565070 TMEM41AQ96HV5 264 aa11.4□□□□□ -0.59
NSMCE1-208ENST00000565070 Q96M85 177 aa11.4□□□□□ -0.59
NSMCE1-208ENST00000565070 SIGLEC12Q96PQ1 595 aa11.4□□□□□ -0.59
NSMCE1-208ENST00000565070 FAM173AQ9BQD7 235 aa11.4□□□□□ -0.59
NSMCE1-208ENST00000565070 NDEL1Q9GZM8 345 aa11.4□□□□□ -0.59
NSMCE1-208ENST00000565070 GALNT8Q9NY28 637 aa11.4□□□□□ -0.59
NSMCE1-208ENST00000565070 TAS2R10Q9NYW0 307 aa11.4□□□□□ -0.59
NSMCE1-208ENST00000565070 SIRT4Q9Y6E7 314 aaPredicted RBP11.4□□□□□ -0.59
NSMCE1-208ENST00000565070 EML6Q6ZMW3 1958 aa11.4□□□□□ -0.59
NSMCE1-208ENST00000565070 FRYQ5TBA9 3013 aa11.4□□□□□ -0.59
NSMCE1-208ENST00000565070 IGLV3-32A0A0A0MS00 114 aa11.39□□□□□ -0.59
NSMCE1-208ENST00000565070 TMED7-TICAM2A0A0A6YYA0 188 aa11.39□□□□□ -0.59
NSMCE1-208ENST00000565070 ANKUB1A6NFN9 424 aa11.39□□□□□ -0.59
NSMCE1-208ENST00000565070 A8MVM7 634 aa11.39□□□□□ -0.59
NSMCE1-208ENST00000565070 KLRC4-KLRK1H3BQV0 150 aa11.39□□□□□ -0.59
NSMCE1-208ENST00000565070 RNF13O43567 381 aa11.39□□□□□ -0.59
NSMCE1-208ENST00000565070 SUSD5O60279 629 aa11.39□□□□□ -0.59
NSMCE1-208ENST00000565070 TFP02787 698 aa11.39□□□□□ -0.59
NSMCE1-208ENST00000565070 HIST1H2ABP04908 130 aa11.39□□□□□ -0.59
NSMCE1-208ENST00000565070 SDC2P34741 201 aa11.39□□□□□ -0.59
NSMCE1-208ENST00000565070 PTGDSP41222 190 aa11.39□□□□□ -0.59
NSMCE1-208ENST00000565070 CDKN2AP42771 156 aaKnown RBP11.39□□□□□ -0.59
NSMCE1-208ENST00000565070 TAS2R43P59537 309 aa11.39□□□□□ -0.59
NSMCE1-208ENST00000565070 CTXN1P60606 82 aa11.39□□□□□ -0.59
NSMCE1-208ENST00000565070 ZNF766Q5HY98 468 aa11.39□□□□□ -0.59
NSMCE1-208ENST00000565070 PRAMEF20Q5VT98 475 aa11.39□□□□□ -0.59
NSMCE1-208ENST00000565070 C5orf46Q6UWT4 87 aa11.39□□□□□ -0.59
NSMCE1-208ENST00000565070 HIST3H2AQ7L7L0 130 aa11.39□□□□□ -0.59
NSMCE1-208ENST00000565070 VASH1Q7L8A9 365 aaPredicted RBP11.39□□□□□ -0.59
NSMCE1-208ENST00000565070 EXD3Q8N9H8 876 aa11.39□□□□□ -0.59
NSMCE1-208ENST00000565070 ZNRF4Q8WWF5 429 aa11.39□□□□□ -0.59
NSMCE1-208ENST00000565070 ST8SIA1Q92185 356 aa11.39□□□□□ -0.59
NSMCE1-208ENST00000565070 HIST1H2ACQ93077 130 aa11.39□□□□□ -0.59
NSMCE1-208ENST00000565070 SCMH1Q96GD3 660 aa11.39□□□□□ -0.59
NSMCE1-208ENST00000565070 ABHD17AQ96GS6 310 aa11.39□□□□□ -0.59
NSMCE1-208ENST00000565070 DCLRE1CQ96SD1 692 aaKnown RBP11.39□□□□□ -0.59
NSMCE1-208ENST00000565070 KCNS3Q9BQ31 491 aa11.39□□□□□ -0.59
NSMCE1-208ENST00000565070 TMED9Q9BVK6 235 aa11.39□□□□□ -0.59
NSMCE1-208ENST00000565070 SMURF1Q9HCE7 757 aa11.39□□□□□ -0.59
NSMCE1-208ENST00000565070 GALNT9Q9HCQ5 603 aa11.39□□□□□ -0.59
NSMCE1-208ENST00000565070 BOKQ9UMX3 212 aaPredicted RBP11.39□□□□□ -0.59
NSMCE1-208ENST00000565070 TMED7Q9Y3B3 224 aa11.39□□□□□ -0.59
NSMCE1-208ENST00000565070 PCNX3Q9H6A9 2034 aa11.39□□□□□ -0.59
NSMCE1-208ENST00000565070 TMEM72A0PK05 275 aa11.38□□□□□ -0.59
NSMCE1-208ENST00000565070 GABRPO00591 440 aa11.38□□□□□ -0.59
NSMCE1-208ENST00000565070 CTDSP2O14595 271 aa11.38□□□□□ -0.59
NSMCE1-208ENST00000565070 PLPP2O43688 288 aa11.38□□□□□ -0.59
NSMCE1-208ENST00000565070 GLCEO94923 617 aa11.38□□□□□ -0.59
NSMCE1-208ENST00000565070 SFTPCP11686 197 aa11.38□□□□□ -0.59
NSMCE1-208ENST00000565070 RUNX1T1Q06455 604 aa11.38□□□□□ -0.59
NSMCE1-208ENST00000565070 LINC01590Q5TEZ4 76 aa11.38□□□□□ -0.59
NSMCE1-208ENST00000565070 C1QL3Q5VWW1 255 aa11.38□□□□□ -0.59
NSMCE1-208ENST00000565070 BICRALQ6AI39 1079 aa11.38□□□□□ -0.59
NSMCE1-208ENST00000565070 GPR139Q6DWJ6 353 aa11.38□□□□□ -0.59
NSMCE1-208ENST00000565070 LEG1Q6P5S2 330 aa11.38□□□□□ -0.59
NSMCE1-208ENST00000565070 MAMDC2Q7Z304 686 aaPredicted RBP11.38□□□□□ -0.59
NSMCE1-208ENST00000565070 JAZF1Q86VZ6 243 aa11.38□□□□□ -0.59
NSMCE1-208ENST00000565070 SYS1Q8N2H4 156 aa11.38□□□□□ -0.59
NSMCE1-208ENST00000565070 CENPSQ8N2Z9 138 aa11.38□□□□□ -0.59
NSMCE1-208ENST00000565070 PARP16Q8N5Y8 322 aa11.38□□□□□ -0.59
NSMCE1-208ENST00000565070 SYT14Q8NB59 555 aa11.38□□□□□ -0.59
NSMCE1-208ENST00000565070 LSM14AQ8ND56 463 aaKnown RBP11.38□□□□□ -0.59
NSMCE1-208ENST00000565070 OR51L1Q8NGJ5 315 aa11.38□□□□□ -0.59
NSMCE1-208ENST00000565070 STK35Q8TDR2 534 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms