RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 RCE1Q9Y256 329 aa11.91□□□□□ -0.5
VPS9D1-204ENST00000565023 SLC35F4A4IF30 521 aa11.9□□□□□ -0.5
VPS9D1-204ENST00000565023 OR6C65A6NJZ3 312 aa11.9□□□□□ -0.5
VPS9D1-204ENST00000565023 OVOL3O00110 214 aa11.9□□□□□ -0.5
VPS9D1-204ENST00000565023 GMNNO75496 209 aa11.9□□□□□ -0.5
VPS9D1-204ENST00000565023 OR5F1O95221 314 aa11.9□□□□□ -0.5
VPS9D1-204ENST00000565023 OR6A2O95222 327 aa11.9□□□□□ -0.5
VPS9D1-204ENST00000565023 CD8AP01732 235 aa11.9□□□□□ -0.5
VPS9D1-204ENST00000565023 ADORA3P0DMS8 318 aa11.9□□□□□ -0.5
VPS9D1-204ENST00000565023 THRBP10828 461 aa11.9□□□□□ -0.5
VPS9D1-204ENST00000565023 MSX2P35548 267 aaPredicted RBP11.9□□□□□ -0.5
VPS9D1-204ENST00000565023 ACVR1BP36896 505 aa11.9□□□□□ -0.5
VPS9D1-204ENST00000565023 PUDPQ08623 228 aa11.9□□□□□ -0.5
VPS9D1-204ENST00000565023 TNK1Q13470 666 aa11.9□□□□□ -0.5
VPS9D1-204ENST00000565023 CAMK2DQ13557 499 aa11.9□□□□□ -0.5
VPS9D1-204ENST00000565023 MFSD13AQ14CX5 517 aa11.9□□□□□ -0.5
VPS9D1-204ENST00000565023 IFI44LQ53G44 452 aa11.9□□□□□ -0.5
VPS9D1-204ENST00000565023 PHYHD1Q5SRE7 291 aa11.9□□□□□ -0.5
VPS9D1-204ENST00000565023 VHLLQ6RSH7 139 aa11.9□□□□□ -0.5
VPS9D1-204ENST00000565023 MUC15Q8N387 334 aa11.9□□□□□ -0.5
VPS9D1-204ENST00000565023 PIK3C3Q8NEB9 887 aa11.9□□□□□ -0.5
VPS9D1-204ENST00000565023 GEMIN6Q8WXD5 167 aaKnown RBP11.9□□□□□ -0.5
VPS9D1-204ENST00000565023 BCL2L2Q92843 193 aaPredicted RBP11.9□□□□□ -0.5
VPS9D1-204ENST00000565023 SLC41A3Q96GZ6 507 aa11.9□□□□□ -0.5
VPS9D1-204ENST00000565023 MPP4Q96JB8 637 aa11.9□□□□□ -0.5
VPS9D1-204ENST00000565023 HSH2DQ96JZ2 352 aa11.9□□□□□ -0.5
VPS9D1-204ENST00000565023 COX4I2Q96KJ9 171 aa11.9□□□□□ -0.5
VPS9D1-204ENST00000565023 OR2M2Q96R28 347 aa11.9□□□□□ -0.5
VPS9D1-204ENST00000565023 DHRS9Q9BPW9 319 aa11.9□□□□□ -0.5
VPS9D1-204ENST00000565023 KCNS3Q9BQ31 491 aa11.9□□□□□ -0.5
VPS9D1-204ENST00000565023 PRSS27Q9BQR3 290 aa11.9□□□□□ -0.5
VPS9D1-204ENST00000565023 CACNG6Q9BXT2 260 aa11.9□□□□□ -0.5
VPS9D1-204ENST00000565023 LINC00470Q9BZP3 86 aa11.9□□□□□ -0.5
VPS9D1-204ENST00000565023 FKRPQ9H9S5 495 aa11.9□□□□□ -0.5
VPS9D1-204ENST00000565023 CRLF2Q9HC73 371 aa11.9□□□□□ -0.5
VPS9D1-204ENST00000565023 GPR35Q9HC97 309 aa11.9□□□□□ -0.5
VPS9D1-204ENST00000565023 PRPF19Q9UMS4 504 aaKnown RBP11.9□□□□□ -0.5
VPS9D1-204ENST00000565023 SAMD4AQ9UPU9 718 aaKnown RBP11.9□□□□□ -0.5
VPS9D1-204ENST00000565023 CORINQ9Y5Q5 1042 aa11.9□□□□□ -0.5
VPS9D1-204ENST00000565023 SNX13Q9Y5W8 968 aa11.9□□□□□ -0.5
VPS9D1-204ENST00000565023 VPS13CQ709C8 3753 aa11.9□□□□□ -0.5
VPS9D1-204ENST00000565023 IGHV1-18A0A0C4DH31 117 aa11.89□□□□□ -0.51
VPS9D1-204ENST00000565023 ZNF726A6NNF4 738 aa11.89□□□□□ -0.51
VPS9D1-204ENST00000565023 ARPC2O15144 300 aa11.89□□□□□ -0.51
VPS9D1-204ENST00000565023 SSX4O60224 188 aa11.89□□□□□ -0.51
VPS9D1-204ENST00000565023 TMCC2O75069 709 aa11.89□□□□□ -0.51
VPS9D1-204ENST00000565023 ZNF432O94892 652 aa11.89□□□□□ -0.51
VPS9D1-204ENST00000565023 IGHV4-39P01824 125 aa11.89□□□□□ -0.51
VPS9D1-204ENST00000565023 IFNW1P05000 195 aa11.89□□□□□ -0.51
VPS9D1-204ENST00000565023 PAX1P15863 534 aa11.89□□□□□ -0.51
VPS9D1-204ENST00000565023 TTKP33981 857 aa11.89□□□□□ -0.51
VPS9D1-204ENST00000565023 TAS2R41P59536 307 aa11.89□□□□□ -0.51
VPS9D1-204ENST00000565023 NPRL3Q12980 569 aa11.89□□□□□ -0.51
VPS9D1-204ENST00000565023 PIN1Q13526 163 aaPredicted RBP11.89□□□□□ -0.51
VPS9D1-204ENST00000565023 ANKRD16Q6P6B7 361 aa11.89□□□□□ -0.51
VPS9D1-204ENST00000565023 WDFY1Q8IWB7 410 aa11.89□□□□□ -0.51
VPS9D1-204ENST00000565023 LRRC17Q8N6Y2 441 aa11.89□□□□□ -0.51
VPS9D1-204ENST00000565023 ADPRHL1Q8NDY3 354 aa11.89□□□□□ -0.51
VPS9D1-204ENST00000565023 OR6N1Q8NGY5 312 aa11.89□□□□□ -0.51
VPS9D1-204ENST00000565023 OR5J2Q8NH18 312 aa11.89□□□□□ -0.51
VPS9D1-204ENST00000565023 FBXO17Q96EF6 278 aa11.89□□□□□ -0.51
VPS9D1-204ENST00000565023 PRRC1Q96M27 445 aa11.89□□□□□ -0.51
VPS9D1-204ENST00000565023 NSMCE2Q96MF7 247 aa11.89□□□□□ -0.51
VPS9D1-204ENST00000565023 SLC38A2Q96QD8 506 aa11.89□□□□□ -0.51
VPS9D1-204ENST00000565023 NELFAQ9H3P2 528 aa11.89□□□□□ -0.51
VPS9D1-204ENST00000565023 SEC61A2Q9H9S3 476 aa11.89□□□□□ -0.51
VPS9D1-204ENST00000565023 CBLN4Q9NTU7 201 aa11.89□□□□□ -0.51
VPS9D1-204ENST00000565023 MRPL39Q9NYK5 338 aaKnown RBP11.89□□□□□ -0.51
VPS9D1-204ENST00000565023 RIMS3Q9UJD0 308 aa11.89□□□□□ -0.51
VPS9D1-204ENST00000565023 A4GNTQ9UNA3 340 aa11.89□□□□□ -0.51
VPS9D1-204ENST00000565023 RNF223E7ERA6 249 aa11.88□□□□□ -0.51
VPS9D1-204ENST00000565023 PLPP3O14495 311 aa11.88□□□□□ -0.51
VPS9D1-204ENST00000565023 CELA3BP08861 270 aa11.88□□□□□ -0.51
VPS9D1-204ENST00000565023 IDH3GP51553 393 aaPredicted RBP11.88□□□□□ -0.51
VPS9D1-204ENST00000565023 BIDP55957 195 aa11.88□□□□□ -0.51
VPS9D1-204ENST00000565023 MELKQ14680 651 aa11.88□□□□□ -0.51
VPS9D1-204ENST00000565023 ZNF74Q16587 644 aa11.88□□□□□ -0.51
VPS9D1-204ENST00000565023 FKBP9P1Q75LS8 142 aa11.88□□□□□ -0.51
VPS9D1-204ENST00000565023 TSEN54Q7Z6J9 526 aaKnown RBP11.88□□□□□ -0.51
VPS9D1-204ENST00000565023 DTX2Q86UW9 622 aa11.88□□□□□ -0.51
VPS9D1-204ENST00000565023 NKAIN4Q8IVV8 208 aa11.88□□□□□ -0.51
VPS9D1-204ENST00000565023 TMEM123Q8N131 208 aa11.88□□□□□ -0.51
VPS9D1-204ENST00000565023 FAM86B1Q8N7N1 296 aa11.88□□□□□ -0.51
VPS9D1-204ENST00000565023 SCAIQ8N9R8 606 aa11.88□□□□□ -0.51
VPS9D1-204ENST00000565023 PFN4Q8NHR9 129 aa11.88□□□□□ -0.51
VPS9D1-204ENST00000565023 SLC7A6OSQ96CW6 309 aaPredicted RBP11.88□□□□□ -0.51
VPS9D1-204ENST00000565023 SLC19A3Q9BZV2 496 aa11.88□□□□□ -0.51
VPS9D1-204ENST00000565023 NANSQ9NR45 359 aa11.88□□□□□ -0.51
VPS9D1-204ENST00000565023 ACTR3BQ9P1U1 418 aa11.88□□□□□ -0.51
VPS9D1-204ENST00000565023 NOX1Q9Y5S8 564 aa11.88□□□□□ -0.51
VPS9D1-204ENST00000565023 CR1P17927 2039 aa11.87□□□□□ -0.51
VPS9D1-204ENST00000565023 FFAR1O14842 300 aa11.87□□□□□ -0.51
VPS9D1-204ENST00000565023 RNF13O43567 381 aa11.87□□□□□ -0.51
VPS9D1-204ENST00000565023 PRSS23O95084 383 aa11.87□□□□□ -0.51
VPS9D1-204ENST00000565023 MT-ATP6P00846 226 aa11.87□□□□□ -0.51
VPS9D1-204ENST00000565023 HIST1H2ABP04908 130 aa11.87□□□□□ -0.51
VPS9D1-204ENST00000565023 HEXAP06865 529 aa11.87□□□□□ -0.51
VPS9D1-204ENST00000565023 IFNGR1P15260 489 aa11.87□□□□□ -0.51
VPS9D1-204ENST00000565023 PCSK6P29122 969 aa11.87□□□□□ -0.51
VPS9D1-204ENST00000565023 RBM34P42696 430 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms