RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 ADA2Q9NZK5 511 aa26.82■■□□□ 1.88
CMTM4-204ENST00000563952 A4GNTQ9UNA3 340 aa26.82■■□□□ 1.88
CMTM4-204ENST00000563952 MOKQ9UQ07 419 aa26.82■■□□□ 1.88
CMTM4-204ENST00000563952 ARL2BPQ9Y2Y0 163 aa26.82■■□□□ 1.88
CMTM4-204ENST00000563952 MED31Q9Y3C7 131 aa26.82■■□□□ 1.88
CMTM4-204ENST00000563952 SNX13Q9Y5W8 968 aa26.82■■□□□ 1.88
CMTM4-204ENST00000563952 ZNF99A8MXY4 864 aaPredicted RBP26.81■■□□□ 1.88
CMTM4-204ENST00000563952 OR7A10O76100 309 aa26.81■■□□□ 1.88
CMTM4-204ENST00000563952 HOXB1P14653 301 aaPredicted RBP26.81■■□□□ 1.88
CMTM4-204ENST00000563952 FUT1P19526 365 aa26.81■■□□□ 1.88
CMTM4-204ENST00000563952 FABP6P51161 128 aa26.81■■□□□ 1.88
CMTM4-204ENST00000563952 ST3GAL3Q11203 375 aa26.81■■□□□ 1.88
CMTM4-204ENST00000563952 MELKQ14680 651 aa26.81■■□□□ 1.88
CMTM4-204ENST00000563952 AGAP6Q5VW22 663 aa26.81■■□□□ 1.88
CMTM4-204ENST00000563952 CBLL1Q75N03 491 aa26.81■■□□□ 1.88
CMTM4-204ENST00000563952 GEMIN6Q8WXD5 167 aaKnown RBP26.81■■□□□ 1.88
CMTM4-204ENST00000563952 HSH2DQ96JZ2 352 aa26.81■■□□□ 1.88
CMTM4-204ENST00000563952 RHCGQ9UBD6 479 aa26.81■■□□□ 1.88
CMTM4-204ENST00000563952 ACANP16112 2415 aa26.8■■□□□ 1.88
CMTM4-204ENST00000563952 ZNF469Q96JG9 3925 aaPredicted RBP26.8■■□□□ 1.88
CMTM4-204ENST00000563952 PIP5K1CO60331 668 aa26.8■■□□□ 1.88
CMTM4-204ENST00000563952 TTKP33981 857 aa26.8■■□□□ 1.88
CMTM4-204ENST00000563952 CAPZA2P47755 286 aa26.8■■□□□ 1.88
CMTM4-204ENST00000563952 CSNK1A1P48729 337 aa26.8■■□□□ 1.88
CMTM4-204ENST00000563952 IFI44LQ53G44 452 aa26.8■■□□□ 1.88
CMTM4-204ENST00000563952 DTX2Q86UW9 622 aa26.8■■□□□ 1.88
CMTM4-204ENST00000563952 FBXL14Q8N1E6 418 aa26.8■■□□□ 1.88
CMTM4-204ENST00000563952 C18orf12Q96KH6 178 aa26.8■■□□□ 1.88
CMTM4-204ENST00000563952 ADAD1Q96M93 576 aaKnown RBP26.8■■□□□ 1.88
CMTM4-204ENST00000563952 KCNS3Q9BQ31 491 aa26.8■■□□□ 1.88
CMTM4-204ENST00000563952 POFUT2Q9Y2G5 429 aa26.8■■□□□ 1.88
CMTM4-204ENST00000563952 VPS13CQ709C8 3753 aa26.8■■□□□ 1.88
CMTM4-204ENST00000563952 ALPK2Q86TB3 2170 aa26.8■■□□□ 1.88
CMTM4-204ENST00000563952 J3KTA2 159 aa26.79■■□□□ 1.88
CMTM4-204ENST00000563952 PAX7P23759 505 aa26.79■■□□□ 1.88
CMTM4-204ENST00000563952 PIGWQ7Z7B1 504 aa26.79■■□□□ 1.88
CMTM4-204ENST00000563952 OR6X1Q8NH79 312 aa26.79■■□□□ 1.88
CMTM4-204ENST00000563952 FNDC11Q9BVV2 318 aa26.79■■□□□ 1.88
CMTM4-204ENST00000563952 GSX1Q9H4S2 264 aaPredicted RBP26.79■■□□□ 1.88
CMTM4-204ENST00000563952 EGFL7Q9UHF1 273 aa26.79■■□□□ 1.88
CMTM4-204ENST00000563952 TRIM64A6NGJ6 449 aa26.78■■□□□ 1.88
CMTM4-204ENST00000563952 TRIM64BA6NI03 449 aa26.78■■□□□ 1.88
CMTM4-204ENST00000563952 RPL18Q07020 188 aaKnown RBP26.78■■□□□ 1.88
CMTM4-204ENST00000563952 ZNF813Q6ZN06 617 aa26.78■■□□□ 1.88
CMTM4-204ENST00000563952 MUC15Q8N387 334 aa26.78■■□□□ 1.88
CMTM4-204ENST00000563952 RNF148Q8N7C7 305 aa26.78■■□□□ 1.88
CMTM4-204ENST00000563952 LRRC37BQ96QE4 947 aa26.78■■□□□ 1.88
CMTM4-204ENST00000563952 CRNNQ9UBG3 495 aaPredicted RBP26.78■■□□□ 1.88
CMTM4-204ENST00000563952 H7C1Q1 480 aa26.77■■□□□ 1.88
CMTM4-204ENST00000563952 DYNC1I1O14576 645 aa26.77■■□□□ 1.88
CMTM4-204ENST00000563952 BCL10O95999 233 aa26.77■■□□□ 1.88
CMTM4-204ENST00000563952 IGF2P01344 180 aa26.77■■□□□ 1.88
CMTM4-204ENST00000563952 F13BP05160 661 aa26.77■■□□□ 1.88
CMTM4-204ENST00000563952 CECR9P0C854 216 aa26.77■■□□□ 1.88
CMTM4-204ENST00000563952 FUT4P22083 530 aa26.77■■□□□ 1.88
CMTM4-204ENST00000563952 TMEM54Q969K7 222 aa26.77■■□□□ 1.88
CMTM4-204ENST00000563952 ZNF566Q969W8 418 aa26.77■■□□□ 1.88
CMTM4-204ENST00000563952 BDH2Q9BUT1 245 aa26.77■■□□□ 1.88
CMTM4-204ENST00000563952 SEC61A2Q9H9S3 476 aa26.77■■□□□ 1.88
CMTM4-204ENST00000563952 MOV10Q9HCE1 1003 aaKnown RBP26.77■■□□□ 1.88
CMTM4-204ENST00000563952 CBLN4Q9NTU7 201 aa26.77■■□□□ 1.88
CMTM4-204ENST00000563952 ZNF503-AS2A6NEH8 195 aa26.76■■□□□ 1.87
CMTM4-204ENST00000563952 DCTN3O75935 186 aa26.76■■□□□ 1.87
CMTM4-204ENST00000563952 CRYAAP02489 173 aa26.76■■□□□ 1.87
CMTM4-204ENST00000563952 CELA3BP08861 270 aa26.76■■□□□ 1.87
CMTM4-204ENST00000563952 INHBBP09529 407 aa26.76■■□□□ 1.87
CMTM4-204ENST00000563952 IFI30P13284 250 aa26.76■■□□□ 1.87
CMTM4-204ENST00000563952 CBR1P16152 277 aa26.76■■□□□ 1.87
CMTM4-204ENST00000563952 AQP2P41181 271 aa26.76■■□□□ 1.87
CMTM4-204ENST00000563952 NPRL3Q12980 569 aa26.76■■□□□ 1.87
CMTM4-204ENST00000563952 ZNF544Q6NX49 715 aa26.76■■□□□ 1.87
CMTM4-204ENST00000563952 OFCC1Q8IZS5 231 aa26.76■■□□□ 1.87
CMTM4-204ENST00000563952 CIARTQ8N365 385 aaPredicted RBP26.76■■□□□ 1.87
CMTM4-204ENST00000563952 RBM15BQ8NDT2 890 aaKnown RBP26.76■■□□□ 1.87
CMTM4-204ENST00000563952 SLC25A44Q96H78 314 aaPredicted RBP26.76■■□□□ 1.87
CMTM4-204ENST00000563952 SMR3AQ99954 134 aa26.76■■□□□ 1.87
CMTM4-204ENST00000563952 KATNB1Q9BVA0 655 aa26.76■■□□□ 1.87
CMTM4-204ENST00000563952 GRIP2Q9C0E4 1043 aa26.76■■□□□ 1.87
CMTM4-204ENST00000563952 ARL8BQ9NVJ2 186 aa26.76■■□□□ 1.87
CMTM4-204ENST00000563952 GLTPQ9NZD2 209 aa26.76■■□□□ 1.87
CMTM4-204ENST00000563952 TAGLN3Q9UI15 199 aa26.76■■□□□ 1.87
CMTM4-204ENST00000563952 PLCE1Q9P212 2302 aa26.76■■□□□ 1.87
CMTM4-204ENST00000563952 A0A1W2PRG6 482 aa26.75■■□□□ 1.87
CMTM4-204ENST00000563952 MCIDASD6RGH6 385 aa26.75■■□□□ 1.87
CMTM4-204ENST00000563952 FFAR1O14842 300 aa26.75■■□□□ 1.87
CMTM4-204ENST00000563952 SMAD7O15105 426 aaKnown RBP26.75■■□□□ 1.87
CMTM4-204ENST00000563952 B4GALT1P15291 398 aa26.75■■□□□ 1.87
CMTM4-204ENST00000563952 IDH3GP51553 393 aaPredicted RBP26.75■■□□□ 1.87
CMTM4-204ENST00000563952 LSM11P83369 360 aaKnown RBP eCLIP26.75■■□□□ 1.87
CMTM4-204ENST00000563952 NAAAQ02083 359 aa26.75■■□□□ 1.87
CMTM4-204ENST00000563952 TRAM2Q15035 370 aa26.75■■□□□ 1.87
CMTM4-204ENST00000563952 GLYATQ6IB77 296 aa26.75■■□□□ 1.87
CMTM4-204ENST00000563952 MDP1Q86V88 176 aa26.75■■□□□ 1.87
CMTM4-204ENST00000563952 CCDC36Q8IYA8 594 aa26.75■■□□□ 1.87
CMTM4-204ENST00000563952 MOSPD2Q8NHP6 518 aa26.75■■□□□ 1.87
CMTM4-204ENST00000563952 BPIFA2Q96DR5 249 aa26.75■■□□□ 1.87
CMTM4-204ENST00000563952 FOXB1Q99853 325 aa26.75■■□□□ 1.87
CMTM4-204ENST00000563952 INIPQ9NRY2 104 aa26.75■■□□□ 1.87
CMTM4-204ENST00000563952 MAN2C1Q9NTJ4 1040 aa26.75■■□□□ 1.87
CMTM4-204ENST00000563952 GDF2Q9UK05 429 aaPredicted RBP26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms