RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 REP15Q6BDI9 236 aa15.34■□□□□ 0.05
NME3-205ENST00000563854 TSPYL5Q86VY4 417 aaPredicted RBP15.34■□□□□ 0.05
NME3-205ENST00000563854 PROX1Q92786 737 aa15.34■□□□□ 0.05
NME3-205ENST00000563854 ECSITQ9BQ95 431 aa15.34■□□□□ 0.05
NME3-205ENST00000563854 ALPK2Q86TB3 2170 aa15.34■□□□□ 0.05
NME3-205ENST00000563854 A0A096LNT2 108 aa15.33■□□□□ 0.04
NME3-205ENST00000563854 IGHV2OR16-5A0A0B4J2B6 119 aa15.33■□□□□ 0.04
NME3-205ENST00000563854 A8MV72 311 aaPredicted RBP15.33■□□□□ 0.04
NME3-205ENST00000563854 B9A039 149 aa15.33■□□□□ 0.04
NME3-205ENST00000563854 RNF13O43567 381 aa15.33■□□□□ 0.04
NME3-205ENST00000563854 SHOX2O60902 331 aaPredicted RBP15.33■□□□□ 0.04
NME3-205ENST00000563854 F12P00748 615 aaPredicted RBP15.33■□□□□ 0.04
NME3-205ENST00000563854 IFNGR1P15260 489 aa15.33■□□□□ 0.04
NME3-205ENST00000563854 THBS4P35443 961 aa15.33■□□□□ 0.04
NME3-205ENST00000563854 PDLIM4P50479 330 aa15.33■□□□□ 0.04
NME3-205ENST00000563854 HGFACQ04756 655 aa15.33■□□□□ 0.04
NME3-205ENST00000563854 KLF10Q13118 480 aa15.33■□□□□ 0.04
NME3-205ENST00000563854 SNTB2Q13425 540 aaKnown RBP15.33■□□□□ 0.04
NME3-205ENST00000563854 GGTLC2Q14390 218 aa15.33■□□□□ 0.04
NME3-205ENST00000563854 MELKQ14680 651 aa15.33■□□□□ 0.04
NME3-205ENST00000563854 ZNF74Q16587 644 aa15.33■□□□□ 0.04
NME3-205ENST00000563854 GSG1Q2KHT4 349 aa15.33■□□□□ 0.04
NME3-205ENST00000563854 KRT80Q6KB66 452 aa15.33■□□□□ 0.04
NME3-205ENST00000563854 LINC00114Q6XXX2 140 aa15.33■□□□□ 0.04
NME3-205ENST00000563854 DEF8Q6ZN54 512 aa15.33■□□□□ 0.04
NME3-205ENST00000563854 SPATA21Q7Z572 469 aa15.33■□□□□ 0.04
NME3-205ENST00000563854 PXKQ7Z7A4 578 aa15.33■□□□□ 0.04
NME3-205ENST00000563854 SNX32Q86XE0 403 aa15.33■□□□□ 0.04
NME3-205ENST00000563854 LRRC17Q8N6Y2 441 aa15.33■□□□□ 0.04
NME3-205ENST00000563854 FAM169BQ8N8A8 192 aa15.33■□□□□ 0.04
NME3-205ENST00000563854 RASSF5Q8WWW0 418 aa15.33■□□□□ 0.04
NME3-205ENST00000563854 TNFRSF13CQ96RJ3 184 aa15.33■□□□□ 0.04
NME3-205ENST00000563854 FOXB1Q99853 325 aa15.33■□□□□ 0.04
NME3-205ENST00000563854 SH3GL1Q99961 368 aa15.33■□□□□ 0.04
NME3-205ENST00000563854 NOX3Q9HBY0 568 aa15.33■□□□□ 0.04
NME3-205ENST00000563854 NANSQ9NR45 359 aa15.33■□□□□ 0.04
NME3-205ENST00000563854 SH3GLB1Q9Y371 365 aa15.33■□□□□ 0.04
NME3-205ENST00000563854 SH3PXD2BA1X283 911 aa15.32■□□□□ 0.04
NME3-205ENST00000563854 hCG_2039718K7EN88 272 aa15.32■□□□□ 0.04
NME3-205ENST00000563854 PDE5AO76074 875 aa15.32■□□□□ 0.04
NME3-205ENST00000563854 LYPD3O95274 346 aa15.32■□□□□ 0.04
NME3-205ENST00000563854 HIST1H2ABP04908 130 aa15.32■□□□□ 0.04
NME3-205ENST00000563854 ZNF16P17020 682 aaPredicted RBP15.32■□□□□ 0.04
NME3-205ENST00000563854 PTDSS1P48651 473 aaKnown RBP15.32■□□□□ 0.04
NME3-205ENST00000563854 GZMMP51124 257 aa15.32■□□□□ 0.04
NME3-205ENST00000563854 CRYBA2P53672 197 aa15.32■□□□□ 0.04
NME3-205ENST00000563854 LOXL1Q08397 574 aaPredicted RBP15.32■□□□□ 0.04
NME3-205ENST00000563854 MAPRE2Q15555 327 aa15.32■□□□□ 0.04
NME3-205ENST00000563854 SLC35D2Q76EJ3 337 aa15.32■□□□□ 0.04
NME3-205ENST00000563854 HIST3H2AQ7L7L0 130 aa15.32■□□□□ 0.04
NME3-205ENST00000563854 NANOGNBQ7Z5D8 188 aa15.32■□□□□ 0.04
NME3-205ENST00000563854 CARM1Q86X55 608 aa15.32■□□□□ 0.04
NME3-205ENST00000563854 CCDC36Q8IYA8 594 aa15.32■□□□□ 0.04
NME3-205ENST00000563854 SVOPLQ8N434 492 aa15.32■□□□□ 0.04
NME3-205ENST00000563854 NUP37Q8NFH4 326 aa15.32■□□□□ 0.04
NME3-205ENST00000563854 HIST1H2ACQ93077 130 aa15.32■□□□□ 0.04
NME3-205ENST00000563854 LRRC58Q96CX6 371 aa15.32■□□□□ 0.04
NME3-205ENST00000563854 MS4A3Q96HJ5 214 aa15.32■□□□□ 0.04
NME3-205ENST00000563854 LRR1Q96L50 414 aa15.32■□□□□ 0.04
NME3-205ENST00000563854 PIMREGQ9BSJ6 248 aa15.32■□□□□ 0.04
NME3-205ENST00000563854 DYNLRB1Q9NP97 96 aa15.32■□□□□ 0.04
NME3-205ENST00000563854 CHD3Q12873 2000 aaKnown RBP15.31■□□□□ 0.04
NME3-205ENST00000563854 LOC100653049A0A140TA62 436 aa15.31■□□□□ 0.04
NME3-205ENST00000563854 VSTM5A8MXK1 200 aa15.31■□□□□ 0.04
NME3-205ENST00000563854 FXYD1O00168 92 aa15.31■□□□□ 0.04
NME3-205ENST00000563854 KRT34O76011 436 aa15.31■□□□□ 0.04
NME3-205ENST00000563854 NPR2P20594 1047 aa15.31■□□□□ 0.04
NME3-205ENST00000563854 USF1P22415 310 aaPredicted RBP15.31■□□□□ 0.04
NME3-205ENST00000563854 TAS2R41P59536 307 aa15.31■□□□□ 0.04
NME3-205ENST00000563854 DAG1Q14118 895 aa15.31■□□□□ 0.04
NME3-205ENST00000563854 EFNB3Q15768 340 aa15.31■□□□□ 0.04
NME3-205ENST00000563854 LRRC23Q53EV4 343 aaPredicted RBP15.31■□□□□ 0.04
NME3-205ENST00000563854 C6orf52Q5T4I8 152 aa15.31■□□□□ 0.04
NME3-205ENST00000563854 CGB2Q6NT52 195 aa15.31■□□□□ 0.04
NME3-205ENST00000563854 OR8J3Q8NGG0 315 aa15.31■□□□□ 0.04
NME3-205ENST00000563854 MPP4Q96JB8 637 aa15.31■□□□□ 0.04
NME3-205ENST00000563854 ZNF442Q9H7R0 627 aa15.31■□□□□ 0.04
NME3-205ENST00000563854 SAR1AQ9NR31 198 aa15.31■□□□□ 0.04
NME3-205ENST00000563854 SONP18583 2426 aaKnown RBP15.31■□□□□ 0.04
NME3-205ENST00000563854 BBIP1A8MTZ0 92 aa15.3■□□□□ 0.04
NME3-205ENST00000563854 BLOC1S5-TXNDC5H3BN57 136 aa15.3■□□□□ 0.04
NME3-205ENST00000563854 ABCA1O95477 2261 aa15.3■□□□□ 0.04
NME3-205ENST00000563854 RAB36O95755 333 aa15.3■□□□□ 0.04
NME3-205ENST00000563854 NHLRC1Q6VVB1 395 aa15.3■□□□□ 0.04
NME3-205ENST00000563854 CCDC80Q76M96 950 aa15.3■□□□□ 0.04
NME3-205ENST00000563854 PFN4Q8NHR9 129 aa15.3■□□□□ 0.04
NME3-205ENST00000563854 MDFIQ99750 246 aa15.3■□□□□ 0.04
NME3-205ENST00000563854 PCDHAC1Q9H158 963 aa15.3■□□□□ 0.04
NME3-205ENST00000563854 PLK3Q9H4B4 646 aa15.3■□□□□ 0.04
NME3-205ENST00000563854 MRGBPQ9NV56 204 aa15.3■□□□□ 0.04
NME3-205ENST00000563854 TAS2R5Q9NYW4 299 aa15.3■□□□□ 0.04
NME3-205ENST00000563854 ZNF229Q9UJW7 825 aa15.3■□□□□ 0.04
NME3-205ENST00000563854 BAG5Q9UL15 447 aa15.3■□□□□ 0.04
NME3-205ENST00000563854 ERCC1P07992 297 aaPredicted RBP15.29■□□□□ 0.04
NME3-205ENST00000563854 PATE4P0C8F1 98 aa15.29■□□□□ 0.04
NME3-205ENST00000563854 OR1E2P47887 323 aa15.29■□□□□ 0.04
NME3-205ENST00000563854 GIPRP48546 466 aa15.29■□□□□ 0.04
NME3-205ENST00000563854 PPOXP50336 477 aa15.29■□□□□ 0.04
NME3-205ENST00000563854 VLDLRP98155 873 aa15.29■□□□□ 0.04
NME3-205ENST00000563854 GUCY1A3Q02108 690 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms