RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 CLN8Q9UBY8 286 aa8.56□□□□□ -1.04
HDGFL3-204ENST00000563790 DNAH5Q8TE73 4624 aa8.55□□□□□ -1.04
HDGFL3-204ENST00000563790 F2RL2O00254 374 aa8.55□□□□□ -1.04
HDGFL3-204ENST00000563790 SHOXO15266 292 aa8.55□□□□□ -1.04
HDGFL3-204ENST00000563790 FAM20BO75063 409 aa8.55□□□□□ -1.04
HDGFL3-204ENST00000563790 LY86O95711 162 aa8.55□□□□□ -1.04
HDGFL3-204ENST00000563790 PAHP00439 452 aa8.55□□□□□ -1.04
HDGFL3-204ENST00000563790 OTCP00480 354 aa8.55□□□□□ -1.04
HDGFL3-204ENST00000563790 IGHV3-13P01766 116 aa8.55□□□□□ -1.04
HDGFL3-204ENST00000563790 S100BP04271 92 aaPredicted RBP8.55□□□□□ -1.04
HDGFL3-204ENST00000563790 ALDH18A1P54886 795 aaKnown RBP8.55□□□□□ -1.04
HDGFL3-204ENST00000563790 SUMO3P55854 103 aaPredicted RBP8.55□□□□□ -1.04
HDGFL3-204ENST00000563790 DR1Q01658 176 aa8.55□□□□□ -1.04
HDGFL3-204ENST00000563790 GTF2H2Q13888 395 aa8.55□□□□□ -1.04
HDGFL3-204ENST00000563790 CD226Q15762 336 aa8.55□□□□□ -1.04
HDGFL3-204ENST00000563790 PFKFB4Q16877 469 aa8.55□□□□□ -1.04
HDGFL3-204ENST00000563790 ARHGAP11BQ3KRB8 267 aa8.55□□□□□ -1.04
HDGFL3-204ENST00000563790 ATP6AP1LQ52LC2 224 aa8.55□□□□□ -1.04
HDGFL3-204ENST00000563790 WDR25Q64LD2 544 aaPredicted RBP8.55□□□□□ -1.04
HDGFL3-204ENST00000563790 GTF2H2CQ6P1K8 395 aa8.55□□□□□ -1.04
HDGFL3-204ENST00000563790 CBLN3Q6UW01 205 aa8.55□□□□□ -1.04
HDGFL3-204ENST00000563790 RNF165Q6ZSG1 346 aa8.55□□□□□ -1.04
HDGFL3-204ENST00000563790 MYLK4Q86YV6 388 aaPredicted RBP8.55□□□□□ -1.04
HDGFL3-204ENST00000563790 OR8B3Q8NGG8 313 aa8.55□□□□□ -1.04
HDGFL3-204ENST00000563790 ZNF519Q8TB69 540 aa8.55□□□□□ -1.04
HDGFL3-204ENST00000563790 GPR119Q8TDV5 335 aa8.55□□□□□ -1.04
HDGFL3-204ENST00000563790 NSUN5Q96P11 429 aaKnown RBP8.55□□□□□ -1.04
HDGFL3-204ENST00000563790 FRG2BQ96QU4 278 aa8.55□□□□□ -1.04
HDGFL3-204ENST00000563790 OR8B2Q96RD0 313 aa8.55□□□□□ -1.04
HDGFL3-204ENST00000563790 PITX2Q99697 317 aa8.55□□□□□ -1.04
HDGFL3-204ENST00000563790 NKX3-1Q99801 234 aaPredicted RBP8.55□□□□□ -1.04
HDGFL3-204ENST00000563790 SSX3Q99909 188 aa8.55□□□□□ -1.04
HDGFL3-204ENST00000563790 NMRAL1Q9HBL8 299 aa8.55□□□□□ -1.04
HDGFL3-204ENST00000563790 FARSBQ9NSD9 589 aaKnown RBP8.55□□□□□ -1.04
HDGFL3-204ENST00000563790 ZNF225Q9UK10 706 aa8.55□□□□□ -1.04
HDGFL3-204ENST00000563790 PSME2Q9UL46 239 aa8.55□□□□□ -1.04
HDGFL3-204ENST00000563790 A0A1W2PQD3 144 aa8.54□□□□□ -1.04
HDGFL3-204ENST00000563790 CCDC189A1A4V9 331 aa8.54□□□□□ -1.04
HDGFL3-204ENST00000563790 PRSS29PA6NIE9 313 aa8.54□□□□□ -1.04
HDGFL3-204ENST00000563790 PPP6CO00743 305 aa8.54□□□□□ -1.04
HDGFL3-204ENST00000563790 PSMG1O95456 288 aa8.54□□□□□ -1.04
HDGFL3-204ENST00000563790 CD55P08174 381 aa8.54□□□□□ -1.04
HDGFL3-204ENST00000563790 IL5RAQ01344 420 aa8.54□□□□□ -1.04
HDGFL3-204ENST00000563790 GLO1Q04760 184 aa8.54□□□□□ -1.04
HDGFL3-204ENST00000563790 PRSS53Q2L4Q9 553 aa8.54□□□□□ -1.04
HDGFL3-204ENST00000563790 GGTA1PQ4G0N0 100 aa8.54□□□□□ -1.04
HDGFL3-204ENST00000563790 SERTAD4-AS1Q5TG53 156 aa8.54□□□□□ -1.04
HDGFL3-204ENST00000563790 METTL2BQ6P1Q9 378 aaKnown RBP8.54□□□□□ -1.04
HDGFL3-204ENST00000563790 NLRC3Q7RTR2 1065 aa8.54□□□□□ -1.04
HDGFL3-204ENST00000563790 KLHL7Q8IXQ5 586 aa8.54□□□□□ -1.04
HDGFL3-204ENST00000563790 RBM15BQ8NDT2 890 aaKnown RBP8.54□□□□□ -1.04
HDGFL3-204ENST00000563790 BEND2Q8NDZ0 799 aa8.54□□□□□ -1.04
HDGFL3-204ENST00000563790 OR9A2Q8NGT5 310 aa8.54□□□□□ -1.04
HDGFL3-204ENST00000563790 SLC25A43Q8WUT9 341 aaPredicted RBP8.54□□□□□ -1.04
HDGFL3-204ENST00000563790 ZNF385AQ96PM9 386 aaKnown RBP8.54□□□□□ -1.04
HDGFL3-204ENST00000563790 P2RX4Q99571 388 aa8.54□□□□□ -1.04
HDGFL3-204ENST00000563790 CDCA4Q9BXL8 241 aa8.54□□□□□ -1.04
HDGFL3-204ENST00000563790 TRIM31Q9BZY9 425 aa8.54□□□□□ -1.04
HDGFL3-204ENST00000563790 FAM234AQ9H0X4 552 aa8.54□□□□□ -1.04
HDGFL3-204ENST00000563790 NOL11Q9H8H0 719 aaKnown RBP8.54□□□□□ -1.04
HDGFL3-204ENST00000563790 A4GALTQ9NPC4 353 aa8.54□□□□□ -1.04
HDGFL3-204ENST00000563790 GRHL1Q9NZI5 618 aa8.54□□□□□ -1.04
HDGFL3-204ENST00000563790 PCTPQ9UKL6 214 aa8.54□□□□□ -1.04
HDGFL3-204ENST00000563790 SNX24Q9Y343 169 aa8.54□□□□□ -1.04
HDGFL3-204ENST00000563790 ZNF780BQ9Y6R6 833 aa8.54□□□□□ -1.04
HDGFL3-204ENST00000563790 COQ9O75208 318 aa8.53□□□□□ -1.04
HDGFL3-204ENST00000563790 C2P06681 752 aa8.53□□□□□ -1.04
HDGFL3-204ENST00000563790 CRABP2P29373 138 aa8.53□□□□□ -1.04
HDGFL3-204ENST00000563790 STX2P32856 288 aa8.53□□□□□ -1.04
HDGFL3-204ENST00000563790 SPRP35270 261 aaPredicted RBP8.53□□□□□ -1.04
HDGFL3-204ENST00000563790 P2RX1P51575 399 aa8.53□□□□□ -1.04
HDGFL3-204ENST00000563790 MAPK12P53778 367 aa8.53□□□□□ -1.04
HDGFL3-204ENST00000563790 PHEXP78562 749 aa8.53□□□□□ -1.04
HDGFL3-204ENST00000563790 MRPS25P82663 173 aaKnown RBP8.53□□□□□ -1.04
HDGFL3-204ENST00000563790 ARF1P84077 181 aaKnown RBP8.53□□□□□ -1.04
HDGFL3-204ENST00000563790 GUCY2DQ02846 1103 aa8.53□□□□□ -1.04
HDGFL3-204ENST00000563790 CCNYL2Q5T2Q4 361 aa8.53□□□□□ -1.04
HDGFL3-204ENST00000563790 GRTP1Q5TC63 336 aa8.53□□□□□ -1.04
HDGFL3-204ENST00000563790 METAP1DQ6UB28 335 aaPredicted RBP8.53□□□□□ -1.04
HDGFL3-204ENST00000563790 C8orf86Q6ZUL3 223 aa8.53□□□□□ -1.04
HDGFL3-204ENST00000563790 RPS27LQ71UM5 84 aaKnown RBP8.53□□□□□ -1.04
HDGFL3-204ENST00000563790 GPR137CQ8N3F9 429 aa8.53□□□□□ -1.04
HDGFL3-204ENST00000563790 C11orf40Q8WZ69 217 aa8.53□□□□□ -1.04
HDGFL3-204ENST00000563790 NUPR2A6NF83 97 aa8.52□□□□□ -1.05
HDGFL3-204ENST00000563790 ZSCAN5BA6NJL1 495 aa8.52□□□□□ -1.05
HDGFL3-204ENST00000563790 SYCE1LA8MT33 242 aa8.52□□□□□ -1.05
HDGFL3-204ENST00000563790 RPL36A-HNRNPH2H7BZ11 118 aa8.52□□□□□ -1.05
HDGFL3-204ENST00000563790 EIF3HO15372 352 aaKnown RBP eCLIP8.52□□□□□ -1.05
HDGFL3-204ENST00000563790 OIP5O43482 229 aa8.52□□□□□ -1.05
HDGFL3-204ENST00000563790 KCNH1O95259 989 aa8.52□□□□□ -1.05
HDGFL3-204ENST00000563790 SBK3P0C264 359 aa8.52□□□□□ -1.05
HDGFL3-204ENST00000563790 DRD4P21917 467 aa8.52□□□□□ -1.05
HDGFL3-204ENST00000563790 LSP1P33241 339 aa8.52□□□□□ -1.05
HDGFL3-204ENST00000563790 CAPZA2P47755 286 aa8.52□□□□□ -1.05
HDGFL3-204ENST00000563790 RAE1P78406 368 aaKnown RBP8.52□□□□□ -1.05
HDGFL3-204ENST00000563790 GSG1Q2KHT4 349 aa8.52□□□□□ -1.05
HDGFL3-204ENST00000563790 TIGD2Q4W5G0 525 aa8.52□□□□□ -1.05
HDGFL3-204ENST00000563790 KHDC1LQ5JSQ8 128 aa8.52□□□□□ -1.05
HDGFL3-204ENST00000563790 RNLSQ5VYX0 342 aa8.52□□□□□ -1.05
HDGFL3-204ENST00000563790 LETMD1Q6P1Q0 360 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms