RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 POFUT2Q9Y2G5 429 aa16.02■□□□□ 0.16
NME3-204ENST00000563498 DYSFO75923 2080 aa16.02■□□□□ 0.15
NME3-204ENST00000563498 TRIM77I1YAP6 450 aa16.01■□□□□ 0.15
NME3-204ENST00000563498 WNT9BO14905 357 aa16.01■□□□□ 0.15
NME3-204ENST00000563498 RP2O75695 350 aa16.01■□□□□ 0.15
NME3-204ENST00000563498 UBL3O95164 117 aa16.01■□□□□ 0.15
NME3-204ENST00000563498 RAB36O95755 333 aa16.01■□□□□ 0.15
NME3-204ENST00000563498 NUDT7P0C024 238 aa16.01■□□□□ 0.15
NME3-204ENST00000563498 HLA-DOBP13765 273 aa16.01■□□□□ 0.15
NME3-204ENST00000563498 B4GALT1P15291 398 aa16.01■□□□□ 0.15
NME3-204ENST00000563498 GIPRP48546 466 aa16.01■□□□□ 0.15
NME3-204ENST00000563498 PTDSS1P48651 473 aaKnown RBP16.01■□□□□ 0.15
NME3-204ENST00000563498 ARFIP2P53365 341 aa16.01■□□□□ 0.15
NME3-204ENST00000563498 LMO4P61968 165 aa16.01■□□□□ 0.15
NME3-204ENST00000563498 RAB1AP62820 205 aa16.01■□□□□ 0.15
NME3-204ENST00000563498 LRP11Q86VZ4 500 aa16.01■□□□□ 0.15
NME3-204ENST00000563498 MREGQ8N565 214 aa16.01■□□□□ 0.15
NME3-204ENST00000563498 C3orf56Q8N813 242 aa16.01■□□□□ 0.15
NME3-204ENST00000563498 MGARPQ8TDB4 240 aa16.01■□□□□ 0.15
NME3-204ENST00000563498 MAL2Q969L2 176 aa16.01■□□□□ 0.15
NME3-204ENST00000563498 MAELQ96JY0 434 aaKnown RBP16.01■□□□□ 0.15
NME3-204ENST00000563498 EPYCQ99645 322 aa16.01■□□□□ 0.15
NME3-204ENST00000563498 EMC6Q9BV81 110 aa16.01■□□□□ 0.15
NME3-204ENST00000563498 RAD21L1Q9H4I0 556 aa16.01■□□□□ 0.15
NME3-204ENST00000563498 MYEF2Q9P2K5 600 aaKnown RBP16.01■□□□□ 0.15
NME3-204ENST00000563498 PPIHO43447 177 aaKnown RBP16■□□□□ 0.15
NME3-204ENST00000563498 PNPP00491 289 aa16■□□□□ 0.15
NME3-204ENST00000563498 ANPEPP15144 967 aa16■□□□□ 0.15
NME3-204ENST00000563498 EGR1P18146 543 aa16■□□□□ 0.15
NME3-204ENST00000563498 LSP1P33241 339 aa16■□□□□ 0.15
NME3-204ENST00000563498 MYBPC1Q00872 1141 aa16■□□□□ 0.15
NME3-204ENST00000563498 MAD2L1BPQ15013 274 aaPredicted RBP16■□□□□ 0.15
NME3-204ENST00000563498 MMEL1Q495T6 779 aa16■□□□□ 0.15
NME3-204ENST00000563498 C6orf10Q5SRN2 563 aa16■□□□□ 0.15
NME3-204ENST00000563498 GCDHQ92947 438 aaPredicted RBP16■□□□□ 0.15
NME3-204ENST00000563498 SLC47A1Q96FL8 570 aa16■□□□□ 0.15
NME3-204ENST00000563498 JMJD8Q96S16 334 aa16■□□□□ 0.15
NME3-204ENST00000563498 FOXB1Q99853 325 aa16■□□□□ 0.15
NME3-204ENST00000563498 RBM4Q9BWF3 364 aaKnown RBP16■□□□□ 0.15
NME3-204ENST00000563498 ASPNQ9BXN1 380 aa16■□□□□ 0.15
NME3-204ENST00000563498 RSPO3Q9BXY4 272 aaPredicted RBP16■□□□□ 0.15
NME3-204ENST00000563498 ULBP2Q9BZM5 246 aa16■□□□□ 0.15
NME3-204ENST00000563498 THAP1Q9NVV9 213 aa16■□□□□ 0.15
NME3-204ENST00000563498 MRPL39Q9NYK5 338 aaKnown RBP16■□□□□ 0.15
NME3-204ENST00000563498 SLC7A8Q9UHI5 535 aa16■□□□□ 0.15
NME3-204ENST00000563498 MEGF8Q7Z7M0 2845 aa15.99■□□□□ 0.15
NME3-204ENST00000563498 ZNF726A6NNF4 738 aa15.99■□□□□ 0.15
NME3-204ENST00000563498 C5orf58C9J3I9 102 aa15.99■□□□□ 0.15
NME3-204ENST00000563498 NCR1O76036 304 aa15.99■□□□□ 0.15
NME3-204ENST00000563498 BGLAPP02818 100 aa15.99■□□□□ 0.15
NME3-204ENST00000563498 NAT2P11245 290 aa15.99■□□□□ 0.15
NME3-204ENST00000563498 EPHA1P21709 976 aa15.99■□□□□ 0.15
NME3-204ENST00000563498 CBLP22681 906 aa15.99■□□□□ 0.15
NME3-204ENST00000563498 LIMS1P48059 325 aa15.99■□□□□ 0.15
NME3-204ENST00000563498 POLR2JP52435 117 aaKnown RBP15.99■□□□□ 0.15
NME3-204ENST00000563498 AQP5P55064 265 aa15.99■□□□□ 0.15
NME3-204ENST00000563498 PUDPQ08623 228 aa15.99■□□□□ 0.15
NME3-204ENST00000563498 TNFAIP8L3Q5GJ75 292 aa15.99■□□□□ 0.15
NME3-204ENST00000563498 NXNQ6DKJ4 435 aa15.99■□□□□ 0.15
NME3-204ENST00000563498 WDR93Q6P2C0 686 aa15.99■□□□□ 0.15
NME3-204ENST00000563498 FAHD2BQ6P2I3 314 aaPredicted RBP15.99■□□□□ 0.15
NME3-204ENST00000563498 DHRS4L2Q6PKH6 230 aa15.99■□□□□ 0.15
NME3-204ENST00000563498 PXKQ7Z7A4 578 aa15.99■□□□□ 0.15
NME3-204ENST00000563498 PEG10Q86TG7 708 aaKnown RBP15.99■□□□□ 0.15
NME3-204ENST00000563498 OR6N1Q8NGY5 312 aa15.99■□□□□ 0.15
NME3-204ENST00000563498 FAHD2AQ96GK7 314 aa15.99■□□□□ 0.15
NME3-204ENST00000563498 TXNDC15Q96J42 360 aa15.99■□□□□ 0.15
NME3-204ENST00000563498 KCNK9Q9NPC2 374 aa15.99■□□□□ 0.15
NME3-204ENST00000563498 G6PC2Q9NQR9 355 aa15.99■□□□□ 0.15
NME3-204ENST00000563498 MED29Q9NX70 200 aa15.99■□□□□ 0.15
NME3-204ENST00000563498 TESQ9UGI8 421 aaKnown RBP15.99■□□□□ 0.15
NME3-204ENST00000563498 DUSP13Q9UII6 198 aa15.99■□□□□ 0.15
NME3-204ENST00000563498 A0A1W2PPW3 197 aa15.98■□□□□ 0.15
NME3-204ENST00000563498 CLIC1O00299 241 aa15.98■□□□□ 0.15
NME3-204ENST00000563498 SNNO75324 88 aaPredicted RBP15.98■□□□□ 0.15
NME3-204ENST00000563498 SERPINA5P05154 406 aa15.98■□□□□ 0.15
NME3-204ENST00000563498 PMS2P3Q13401 168 aa15.98■□□□□ 0.15
NME3-204ENST00000563498 CAMK2DQ13557 499 aa15.98■□□□□ 0.15
NME3-204ENST00000563498 C1orf229Q6ZS94 237 aaPredicted RBP15.98■□□□□ 0.15
NME3-204ENST00000563498 PIWIL3Q7Z3Z3 882 aaKnown RBP15.98■□□□□ 0.15
NME3-204ENST00000563498 COMTD1Q86VU5 262 aa15.98■□□□□ 0.15
NME3-204ENST00000563498 GTF2H4Q92759 462 aa15.98■□□□□ 0.15
NME3-204ENST00000563498 PAIP2Q9BPZ3 127 aaKnown RBP15.98■□□□□ 0.15
NME3-204ENST00000563498 SPATA5L1Q9BVQ7 753 aa15.98■□□□□ 0.15
NME3-204ENST00000563498 PAIP1Q9H074 479 aaKnown RBP15.98■□□□□ 0.15
NME3-204ENST00000563498 SLC52A3Q9NQ40 469 aa15.98■□□□□ 0.15
NME3-204ENST00000563498 SELENONQ9NZV5 590 aa15.98■□□□□ 0.15
NME3-204ENST00000563498 GPR160Q9UJ42 338 aa15.98■□□□□ 0.15
NME3-204ENST00000563498 FZR1Q9UM11 496 aa15.98■□□□□ 0.15
NME3-204ENST00000563498 MGAM2Q2M2H8 2515 aa15.97■□□□□ 0.15
NME3-204ENST00000563498 A0A0B4J2E0 115 aa15.97■□□□□ 0.15
NME3-204ENST00000563498 A0A1B0GX12 115 aa15.97■□□□□ 0.15
NME3-204ENST00000563498 SLC22A23A1A5C7 686 aa15.97■□□□□ 0.15
NME3-204ENST00000563498 ENTPD5O75356 428 aa15.97■□□□□ 0.15
NME3-204ENST00000563498 HOXB9P17482 250 aaPredicted RBP15.97■□□□□ 0.15
NME3-204ENST00000563498 RAB39AQ14964 217 aa15.97■□□□□ 0.15
NME3-204ENST00000563498 PCGF3Q3KNV8 242 aa15.97■□□□□ 0.15
NME3-204ENST00000563498 GLIPR1L2Q4G1C9 344 aa15.97■□□□□ 0.15
NME3-204ENST00000563498 SWT1Q5T5J6 900 aaKnown RBP15.97■□□□□ 0.15
NME3-204ENST00000563498 HHATQ5VTY9 493 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms