RNA–Protein interactions for RNA: ENST00000563492.1

CDH11-208, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 468 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-208ENST00000563492 RAB1BQ9H0U4 201 aa5.95□□□□□ -1.46
CDH11-208ENST00000563492 ARMC7Q9H6L4 198 aa5.95□□□□□ -1.46
CDH11-208ENST00000563492 NARFLQ9H6Q4 476 aa5.95□□□□□ -1.46
CDH11-208ENST00000563492 ZNF442Q9H7R0 627 aa5.95□□□□□ -1.46
CDH11-208ENST00000563492 CACYBPQ9HB71 228 aaKnown RBP5.95□□□□□ -1.46
CDH11-208ENST00000563492 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.95□□□□□ -1.46
CDH11-208ENST00000563492 KCNS2Q9ULS6 477 aa5.95□□□□□ -1.46
CDH11-208ENST00000563492 YLPM1P49750 1951 aaKnown RBP5.95□□□□□ -1.46
CDH11-208ENST00000563492 CPSF4LA6NMK7 179 aaKnown RBP5.94□□□□□ -1.46
CDH11-208ENST00000563492 KPNA4O00629 521 aaPredicted RBP5.94□□□□□ -1.46
CDH11-208ENST00000563492 POLR3GO15318 223 aaPredicted RBP5.94□□□□□ -1.46
CDH11-208ENST00000563492 PDE5AO76074 875 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 CH25HO95992 272 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 HOXB1P14653 301 aaPredicted RBP5.94□□□□□ -1.46
CDH11-208ENST00000563492 TNFRSF1BP20333 461 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 AHCYP23526 432 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 SLC6A2P23975 617 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 GIFP27352 417 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 APEX1P27695 318 aaKnown RBP5.94□□□□□ -1.46
CDH11-208ENST00000563492 RBMXP38159 391 aaKnown RBP5.94□□□□□ -1.46
CDH11-208ENST00000563492 PTDSS1P48651 473 aaKnown RBP5.94□□□□□ -1.46
CDH11-208ENST00000563492 CRYBA2P53672 197 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 BIDP55957 195 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 MTPNP58546 118 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 STX1BP61266 288 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 RAB1AP62820 205 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 RUNX1T1Q06455 604 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 PUDPQ08623 228 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 RIN1Q13671 783 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 MELKQ14680 651 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 GSG1Q2KHT4 349 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 ALKBH6Q3KRA9 238 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 C3orf36Q3SXR2 165 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 RUNDC3AQ59EK9 446 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 TTMPQ5BVD1 217 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 ELFN2Q5R3F8 820 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 C1QTNF12Q5T7M4 302 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 FAM91A1Q658Y4 838 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 LRFN4Q6PJG9 635 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 LINC00114Q6XXX2 140 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 NET1Q7Z628 596 aaPredicted RBP5.94□□□□□ -1.46
CDH11-208ENST00000563492 KRT73Q86Y46 540 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 ARMC8Q8IUR7 673 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 ZNF584Q8IVC4 421 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 ZNF786Q8N393 782 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 ANKK1Q8NFD2 765 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 OR6N1Q8NGY5 312 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 VANGL1Q8TAA9 524 aaPredicted RBP5.94□□□□□ -1.46
CDH11-208ENST00000563492 UBASH3BQ8TF42 649 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 DNAJA4Q8WW22 397 aaPredicted RBP5.94□□□□□ -1.46
CDH11-208ENST00000563492 GTF3AQ92664 365 aaKnown RBP5.94□□□□□ -1.46
CDH11-208ENST00000563492 YIPF5Q969M3 257 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 ZNF317Q96PQ6 595 aaPredicted RBP5.94□□□□□ -1.46
CDH11-208ENST00000563492 TSPAN32Q96QS1 320 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 MCHR1Q99705 422 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 SH3GL3Q99963 347 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 CCDC28BQ9BUN5 200 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 OR51B6Q9H340 312 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 RAD21L1Q9H4I0 556 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 TMEM38AQ9H6F2 299 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 C12orf10Q9HB07 376 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 TMEM27Q9HBJ8 222 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 LPAR2Q9HBW0 351 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 DYNLRB1Q9NP97 96 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 MRPL39Q9NYK5 338 aaKnown RBP5.94□□□□□ -1.46
CDH11-208ENST00000563492 TAS2R5Q9NYW4 299 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 LPAR3Q9UBY5 353 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 REV1Q9UBZ9 1251 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 PRDM4Q9UKN5 801 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 USP22Q9UPT9 525 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 POFUT2Q9Y2G5 429 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 CMAHPQ9Y471 501 aa5.94□□□□□ -1.46
CDH11-208ENST00000563492 ZNF726A6NNF4 738 aa5.93□□□□□ -1.46
CDH11-208ENST00000563492 FAM157AC9JC47 383 aa5.93□□□□□ -1.46
CDH11-208ENST00000563492 SHOX2O60902 331 aaPredicted RBP5.93□□□□□ -1.46
CDH11-208ENST00000563492 RGS9O75916 674 aaPredicted RBP5.93□□□□□ -1.46
CDH11-208ENST00000563492 NCR1O76036 304 aa5.93□□□□□ -1.46
CDH11-208ENST00000563492 TGDSO95455 350 aa5.93□□□□□ -1.46
CDH11-208ENST00000563492 CLPTM1O96005 669 aa5.93□□□□□ -1.46
CDH11-208ENST00000563492 TACSTD2P09758 323 aa5.93□□□□□ -1.46
CDH11-208ENST00000563492 FAM157BP0CG42 384 aa5.93□□□□□ -1.46
CDH11-208ENST00000563492 ADORA3P0DMS8 318 aa5.93□□□□□ -1.46
CDH11-208ENST00000563492 NAT2P11245 290 aa5.93□□□□□ -1.46
CDH11-208ENST00000563492 CD247P20963 164 aa5.93□□□□□ -1.46
CDH11-208ENST00000563492 FUT4P22083 530 aa5.93□□□□□ -1.46
CDH11-208ENST00000563492 CSNK1A1P48729 337 aa5.93□□□□□ -1.46
CDH11-208ENST00000563492 PCBP3P57721 371 aaKnown RBP5.93□□□□□ -1.46
CDH11-208ENST00000563492 ERVS71-1P61550 626 aa5.93□□□□□ -1.46
CDH11-208ENST00000563492 NCALDP61601 193 aa5.93□□□□□ -1.46
CDH11-208ENST00000563492 MYBPC1Q00872 1141 aa5.93□□□□□ -1.46
CDH11-208ENST00000563492 SF3A3Q12874 501 aaKnown RBP eCLIP5.93□□□□□ -1.46
CDH11-208ENST00000563492 ENTPD8Q5MY95 495 aa5.93□□□□□ -1.46
CDH11-208ENST00000563492 AGBL2Q5U5Z8 902 aa5.93□□□□□ -1.46
CDH11-208ENST00000563492 SLC35D2Q76EJ3 337 aa5.93□□□□□ -1.46
CDH11-208ENST00000563492 ZNF627Q7L945 461 aa5.93□□□□□ -1.46
CDH11-208ENST00000563492 PXKQ7Z7A4 578 aa5.93□□□□□ -1.46
CDH11-208ENST00000563492 ADPRHL1Q8NDY3 354 aa5.93□□□□□ -1.46
CDH11-208ENST00000563492 HIPK4Q8NE63 616 aa5.93□□□□□ -1.46
CDH11-208ENST00000563492 LRRC8CQ8TDW0 803 aa5.93□□□□□ -1.46
CDH11-208ENST00000563492 NEU4Q8WWR8 484 aaPredicted RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms