RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 TBX19O60806 448 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 F7P08709 466 aaPredicted RBP5.8□□□□□ -1.48
CLK3-212ENST00000563418 SLC25A4P12235 298 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 GPR4P46093 362 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 FABP5Q01469 135 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 RAB31Q13636 194 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 ITPRIPL2Q3MIP1 535 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 ABI3BPQ7Z7G0 1075 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 PUSL1Q8N0Z8 303 aaKnown RBP5.8□□□□□ -1.48
CLK3-212ENST00000563418 OR13C5Q8NGS8 318 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 OR2G3Q8NGZ4 309 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 GRHL3Q8TE85 626 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 GTF3AQ92664 365 aaKnown RBP5.8□□□□□ -1.48
CLK3-212ENST00000563418 ECHDC3Q96DC8 303 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 FAM122AQ96E09 287 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 SMIM3Q9BZL3 60 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 ZDHHC6Q9H6R6 413 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 KCNIP1Q9NZI2 227 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 ZNF638Q14966 1978 aaKnown RBP5.8□□□□□ -1.48
CLK3-212ENST00000563418 ZNF142P52746 1687 aaPredicted RBP5.8□□□□□ -1.48
CLK3-212ENST00000563418 A6NLC8 198 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 F6UZH7 168 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 TLX3O43711 291 aaPredicted RBP5.8□□□□□ -1.48
CLK3-212ENST00000563418 RNF224P0DH78 156 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 SHC1P29353 583 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 RPL12P30050 165 aaKnown RBP5.8□□□□□ -1.48
CLK3-212ENST00000563418 CASP9P55211 416 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 UBE2G2P60604 165 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 CTBSQ01459 385 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 INPP5JQ15735 1006 aaPredicted RBP5.8□□□□□ -1.48
CLK3-212ENST00000563418 ZNF79Q15937 498 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 TMEM201Q5SNT2 666 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 PRAMEF8Q5VWM4 474 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 PRAMEF7Q5VXH5 474 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 ZNF66Q6ZN08 573 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 ZNF695Q8IW36 515 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 GPR137CQ8N3F9 429 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 SEC22AQ96IW7 307 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 LRRC3BQ96PB8 259 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 UHRF2Q96PU4 802 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 OR14J1Q9UGF5 321 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 MEIS3P2A8K0S8 358 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 ANKRD66B4E2M5 251 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 APBA3O96018 575 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 ARAFP10398 606 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 AMD1P17707 334 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 EVX2Q03828 476 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 TEAD2Q15562 447 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 MIDNQ504T8 468 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 SPNS3Q6ZMD2 512 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 AMIGO3Q86WK7 504 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 OR10A7Q8NGE5 316 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 FAM110BQ8TC76 370 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 DLEC1Q9Y238 1755 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 CCDC163A0A0D9SF12 145 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 HLA-DOBP13765 273 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 WNT7BP56706 349 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 C21orf58P58505 322 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 PODNL1Q6PEZ8 512 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 WDTC1Q8N5D0 677 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 CMKLR1Q99788 373 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 SLC35A3Q9Y2D2 325 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 AKAP11Q9UKA4 1901 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 MTMR11A4FU01 709 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 A6NDN8 102 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 A6NIN4 97 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 ZNF850A8MQ14 1090 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 PLA2G10O15496 165 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 SLC35G6P0C7Q6 338 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 HIST1H1BP16401 226 aaKnown RBP5.8□□□□□ -1.48
CLK3-212ENST00000563418 PTNP21246 168 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 GNRHRP30968 328 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 OLIG2Q13516 323 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 Q6ZPB1 254 aaPredicted RBP5.8□□□□□ -1.48
CLK3-212ENST00000563418 MISPQ8IVT2 679 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 OR4K1Q8NGD4 311 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 OR5M1Q8NGP8 315 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 PLD4Q96BZ4 506 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 ANAPC16Q96DE5 110 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 RLIMQ9NVW2 624 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 SPATA6Q9NWH7 488 aaPredicted RBP5.8□□□□□ -1.48
CLK3-212ENST00000563418 SPG21Q9NZD8 308 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 DICER1Q9UPY3 1922 aaKnown RBP5.8□□□□□ -1.48
CLK3-212ENST00000563418 M0R1X1 148 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 EMC8O43402 210 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 OR12D1P0DN82 309 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 COX19Q49B96 90 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 NCR3LG1Q68D85 454 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 ZNF836Q6ZNA1 936 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 TRAPPC6BQ86SZ2 158 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 ZNF440Q8IYI8 595 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 OR13C9Q8NGT0 318 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 OR6N2Q8NGY6 317 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 SLC25A44Q96H78 314 aaPredicted RBP5.8□□□□□ -1.48
CLK3-212ENST00000563418 FUBP3Q96I24 572 aaKnown RBP eCLIP5.8□□□□□ -1.48
CLK3-212ENST00000563418 ACPTQ9BZG2 426 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 SLC25A18Q9H1K4 315 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 ZFP64Q9NPA5 681 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 TCRBV21S2A2A0A5A6 115 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 B4E171 279 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms