RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 CSNK1A1P48729 337 aa14.65□□□□□ -0.06
CLK3-210ENST00000563112 IDH3GP51553 393 aaPredicted RBP14.65□□□□□ -0.06
CLK3-210ENST00000563112 EFNA4P52798 201 aa14.65□□□□□ -0.06
CLK3-210ENST00000563112 TAS2R41P59536 307 aa14.65□□□□□ -0.06
CLK3-210ENST00000563112 ZP4Q12836 540 aa14.65□□□□□ -0.06
CLK3-210ENST00000563112 PHYHD1Q5SRE7 291 aa14.65□□□□□ -0.06
CLK3-210ENST00000563112 NHLRC1Q6VVB1 395 aa14.65□□□□□ -0.06
CLK3-210ENST00000563112 WDR88Q6ZMY6 472 aa14.65□□□□□ -0.06
CLK3-210ENST00000563112 ZNF813Q6ZN06 617 aa14.65□□□□□ -0.06
CLK3-210ENST00000563112 SLC35D2Q76EJ3 337 aa14.65□□□□□ -0.06
CLK3-210ENST00000563112 ZNF583Q96ND8 569 aa14.65□□□□□ -0.06
CLK3-210ENST00000563112 CA10Q9NS85 328 aa14.65□□□□□ -0.06
CLK3-210ENST00000563112 ZNF229Q9UJW7 825 aa14.65□□□□□ -0.06
CLK3-210ENST00000563112 AP3M1Q9Y2T2 418 aa14.65□□□□□ -0.06
CLK3-210ENST00000563112 B9A039 149 aa14.64□□□□□ -0.07
CLK3-210ENST00000563112 INAFM1C9JVW0 142 aa14.64□□□□□ -0.07
CLK3-210ENST00000563112 RNF13O43567 381 aa14.64□□□□□ -0.07
CLK3-210ENST00000563112 SEC14L2O76054 403 aa14.64□□□□□ -0.07
CLK3-210ENST00000563112 PDE5AO76074 875 aa14.64□□□□□ -0.07
CLK3-210ENST00000563112 IFNGR1P15260 489 aa14.64□□□□□ -0.07
CLK3-210ENST00000563112 CRYBA2P53672 197 aa14.64□□□□□ -0.07
CLK3-210ENST00000563112 BIDP55957 195 aa14.64□□□□□ -0.07
CLK3-210ENST00000563112 NPRL3Q12980 569 aa14.64□□□□□ -0.07
CLK3-210ENST00000563112 SWI5Q1ZZU3 235 aa14.64□□□□□ -0.07
CLK3-210ENST00000563112 VHLLQ6RSH7 139 aa14.64□□□□□ -0.07
CLK3-210ENST00000563112 DEF8Q6ZN54 512 aa14.64□□□□□ -0.07
CLK3-210ENST00000563112 NANOGNBQ7Z5D8 188 aa14.64□□□□□ -0.07
CLK3-210ENST00000563112 OR2T12Q8NG77 320 aa14.64□□□□□ -0.07
CLK3-210ENST00000563112 RP9Q8TA86 221 aaKnown RBP14.64□□□□□ -0.07
CLK3-210ENST00000563112 NANOS1Q8WY41 292 aaKnown RBP14.64□□□□□ -0.07
CLK3-210ENST00000563112 HTRA1Q92743 480 aa14.64□□□□□ -0.07
CLK3-210ENST00000563112 ZNF426Q9BUY5 554 aa14.64□□□□□ -0.07
CLK3-210ENST00000563112 FBXO9Q9UK97 447 aaPredicted RBP14.64□□□□□ -0.07
CLK3-210ENST00000563112 FKBP7Q9Y680 259 aa14.64□□□□□ -0.07
CLK3-210ENST00000563112 ABCA1O95477 2261 aa14.64□□□□□ -0.07
CLK3-210ENST00000563112 FAM220BPB1ANY3 271 aa14.63□□□□□ -0.07
CLK3-210ENST00000563112 DYNC1I1O14576 645 aa14.63□□□□□ -0.07
CLK3-210ENST00000563112 CCDC22O60826 627 aa14.63□□□□□ -0.07
CLK3-210ENST00000563112 ENTPD5O75356 428 aa14.63□□□□□ -0.07
CLK3-210ENST00000563112 OR5F1O95221 314 aa14.63□□□□□ -0.07
CLK3-210ENST00000563112 CSF3P09919 207 aa14.63□□□□□ -0.07
CLK3-210ENST00000563112 OR4A8P0C604 315 aa14.63□□□□□ -0.07
CLK3-210ENST00000563112 CD79AP11912 226 aa14.63□□□□□ -0.07
CLK3-210ENST00000563112 SLC25A16P16260 332 aa14.63□□□□□ -0.07
CLK3-210ENST00000563112 CALCRP30988 508 aa14.63□□□□□ -0.07
CLK3-210ENST00000563112 IFNA8P32881 189 aa14.63□□□□□ -0.07
CLK3-210ENST00000563112 MDH1P40925 334 aaKnown RBP14.63□□□□□ -0.07
CLK3-210ENST00000563112 GSG1Q2KHT4 349 aa14.63□□□□□ -0.07
CLK3-210ENST00000563112 LRRC23Q53EV4 343 aaPredicted RBP14.63□□□□□ -0.07
CLK3-210ENST00000563112 CYBRD1Q53TN4 286 aa14.63□□□□□ -0.07
CLK3-210ENST00000563112 ZNF627Q7L945 461 aa14.63□□□□□ -0.07
CLK3-210ENST00000563112 ARPINQ7Z6K5 226 aa14.63□□□□□ -0.07
CLK3-210ENST00000563112 MDP1Q86V88 176 aa14.63□□□□□ -0.07
CLK3-210ENST00000563112 LRRC17Q8N6Y2 441 aa14.63□□□□□ -0.07
CLK3-210ENST00000563112 NUP37Q8NFH4 326 aa14.63□□□□□ -0.07
CLK3-210ENST00000563112 OR10H5Q8NGA6 315 aa14.63□□□□□ -0.07
CLK3-210ENST00000563112 OR6X1Q8NH79 312 aa14.63□□□□□ -0.07
CLK3-210ENST00000563112 FAM168AQ92567 244 aa14.63□□□□□ -0.07
CLK3-210ENST00000563112 FOXB1Q99853 325 aa14.63□□□□□ -0.07
CLK3-210ENST00000563112 PRSS27Q9BQR3 290 aa14.63□□□□□ -0.07
CLK3-210ENST00000563112 TAS2R5Q9NYW4 299 aa14.63□□□□□ -0.07
CLK3-210ENST00000563112 ARMCX1Q9P291 453 aa14.63□□□□□ -0.07
CLK3-210ENST00000563112 SONP18583 2426 aaKnown RBP14.63□□□□□ -0.07
CLK3-210ENST00000563112 IGHV4-30-2A0A087WSY4 118 aa14.62□□□□□ -0.07
CLK3-210ENST00000563112 ELOVL7A1L3X0 281 aa14.62□□□□□ -0.07
CLK3-210ENST00000563112 BLOC1S5-TXNDC5H3BN57 136 aa14.62□□□□□ -0.07
CLK3-210ENST00000563112 BCL10O95999 233 aa14.62□□□□□ -0.07
CLK3-210ENST00000563112 F12P00748 615 aaPredicted RBP14.62□□□□□ -0.07
CLK3-210ENST00000563112 HLA-HP01893 362 aa14.62□□□□□ -0.07
CLK3-210ENST00000563112 MT-ND1P03886 318 aa14.62□□□□□ -0.07
CLK3-210ENST00000563112 CELA3BP08861 270 aa14.62□□□□□ -0.07
CLK3-210ENST00000563112 ASAH2BP0C7U1 165 aa14.62□□□□□ -0.07
CLK3-210ENST00000563112 TNFRSF1BP20333 461 aa14.62□□□□□ -0.07
CLK3-210ENST00000563112 KDELR2P33947 212 aa14.62□□□□□ -0.07
CLK3-210ENST00000563112 RBM34P42696 430 aaKnown RBP14.62□□□□□ -0.07
CLK3-210ENST00000563112 ADIPOQQ15848 244 aa14.62□□□□□ -0.07
CLK3-210ENST00000563112 MST1LQ2TV78 715 aa14.62□□□□□ -0.07
CLK3-210ENST00000563112 ARFGEF3Q5TH69 2177 aa14.62□□□□□ -0.07
CLK3-210ENST00000563112 SLC46A3Q7Z3Q1 461 aa14.62□□□□□ -0.07
CLK3-210ENST00000563112 TSPYL5Q86VY4 417 aaPredicted RBP14.62□□□□□ -0.07
CLK3-210ENST00000563112 MICU2Q8IYU8 434 aa14.62□□□□□ -0.07
CLK3-210ENST00000563112 ZNF525Q8N782 197 aa14.62□□□□□ -0.07
CLK3-210ENST00000563112 POU5F2Q8N7G0 328 aa14.62□□□□□ -0.07
CLK3-210ENST00000563112 LZICQ8WZA0 190 aa14.62□□□□□ -0.07
CLK3-210ENST00000563112 ZNF566Q969W8 418 aa14.62□□□□□ -0.07
CLK3-210ENST00000563112 RCN3Q96D15 328 aa14.62□□□□□ -0.07
CLK3-210ENST00000563112 SLC25A44Q96H78 314 aaPredicted RBP14.62□□□□□ -0.07
CLK3-210ENST00000563112 VRK1Q99986 396 aaPredicted RBP14.62□□□□□ -0.07
CLK3-210ENST00000563112 DENND2DQ9H6A0 471 aaPredicted RBP14.62□□□□□ -0.07
CLK3-210ENST00000563112 SEC61A2Q9H9S3 476 aa14.62□□□□□ -0.07
CLK3-210ENST00000563112 GLTPQ9NZD2 209 aa14.62□□□□□ -0.07
CLK3-210ENST00000563112 RIMS3Q9UJD0 308 aa14.62□□□□□ -0.07
CLK3-210ENST00000563112 FBXL3Q9UKT7 428 aa14.62□□□□□ -0.07
CLK3-210ENST00000563112 SPEF1Q9Y4P9 236 aa14.62□□□□□ -0.07
CLK3-210ENST00000563112 CR1P17927 2039 aa14.61□□□□□ -0.07
CLK3-210ENST00000563112 IGHV2OR16-5A0A0B4J2B6 119 aa14.61□□□□□ -0.07
CLK3-210ENST00000563112 TLX2O43763 284 aaPredicted RBP14.61□□□□□ -0.07
CLK3-210ENST00000563112 RAB36O95755 333 aa14.61□□□□□ -0.07
CLK3-210ENST00000563112 THRBP10828 461 aa14.61□□□□□ -0.07
CLK3-210ENST00000563112 B4GALT1P15291 398 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms