RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 THBDP07204 575 aa8.62□□□□□ -1.03
CLK3-208ENST00000562626 COX5AP20674 150 aa8.62□□□□□ -1.03
CLK3-208ENST00000562626 FPR3P25089 353 aa8.62□□□□□ -1.03
CLK3-208ENST00000562626 CD79BP40259 229 aa8.62□□□□□ -1.03
CLK3-208ENST00000562626 SLC9A3P48764 834 aa8.62□□□□□ -1.03
CLK3-208ENST00000562626 CTXN1P60606 82 aa8.62□□□□□ -1.03
CLK3-208ENST00000562626 LCN6P62502 163 aa8.62□□□□□ -1.03
CLK3-208ENST00000562626 ERVK-25P63136 954 aa8.62□□□□□ -1.03
CLK3-208ENST00000562626 FAPQ12884 760 aa8.62□□□□□ -1.03
CLK3-208ENST00000562626 TSPAN31Q12999 210 aa8.62□□□□□ -1.03
CLK3-208ENST00000562626 TOP3AQ13472 1001 aaPredicted RBP8.62□□□□□ -1.03
CLK3-208ENST00000562626 C1DQ13901 141 aaKnown RBP8.62□□□□□ -1.03
CLK3-208ENST00000562626 ALG10Q5BKT4 473 aa8.62□□□□□ -1.03
CLK3-208ENST00000562626 FBXW9Q5XUX1 488 aa8.62□□□□□ -1.03
CLK3-208ENST00000562626 KLHL17Q6TDP4 642 aa8.62□□□□□ -1.03
CLK3-208ENST00000562626 SEZ6L2Q6UXD5 910 aa8.62□□□□□ -1.03
CLK3-208ENST00000562626 HIST3H2AQ7L7L0 130 aa8.62□□□□□ -1.03
CLK3-208ENST00000562626 RRM2BQ7LG56 351 aa8.62□□□□□ -1.03
CLK3-208ENST00000562626 FAM122BQ7Z309 247 aa8.62□□□□□ -1.03
CLK3-208ENST00000562626 C20orf196Q8IYI0 205 aa8.62□□□□□ -1.03
CLK3-208ENST00000562626 ANKK1Q8NFD2 765 aa8.62□□□□□ -1.03
CLK3-208ENST00000562626 ZNF519Q8TB69 540 aa8.62□□□□□ -1.03
CLK3-208ENST00000562626 GIPC3Q8TF64 312 aa8.62□□□□□ -1.03
CLK3-208ENST00000562626 HDAC2Q92769 488 aaKnown RBP8.62□□□□□ -1.03
CLK3-208ENST00000562626 HIST1H2ACQ93077 130 aa8.62□□□□□ -1.03
CLK3-208ENST00000562626 SAMD8Q96LT4 415 aa8.62□□□□□ -1.03
CLK3-208ENST00000562626 Q96M85 177 aa8.62□□□□□ -1.03
CLK3-208ENST00000562626 RAB3IPQ96QF0 476 aaPredicted RBP8.62□□□□□ -1.03
CLK3-208ENST00000562626 FEVQ99581 238 aa8.62□□□□□ -1.03
CLK3-208ENST00000562626 TACO1Q9BSH4 297 aaKnown RBP8.62□□□□□ -1.03
CLK3-208ENST00000562626 KATNB1Q9BVA0 655 aa8.62□□□□□ -1.03
CLK3-208ENST00000562626 SLCO5A1Q9H2Y9 848 aa8.62□□□□□ -1.03
CLK3-208ENST00000562626 OR52D1Q9H346 318 aa8.62□□□□□ -1.03
CLK3-208ENST00000562626 NELFAQ9H3P2 528 aa8.62□□□□□ -1.03
CLK3-208ENST00000562626 INIPQ9NRY2 104 aa8.62□□□□□ -1.03
CLK3-208ENST00000562626 PDP1Q9P0J1 537 aaPredicted RBP8.62□□□□□ -1.03
CLK3-208ENST00000562626 REV1Q9UBZ9 1251 aa8.62□□□□□ -1.03
CLK3-208ENST00000562626 MALT1Q9UDY8 824 aa8.62□□□□□ -1.03
CLK3-208ENST00000562626 FOXD3Q9UJU5 478 aaPredicted RBP8.62□□□□□ -1.03
CLK3-208ENST00000562626 ZNF346Q9UL40 294 aaKnown RBP8.62□□□□□ -1.03
CLK3-208ENST00000562626 CENPEQ02224 2701 aa8.61□□□□□ -1.03
CLK3-208ENST00000562626 M0R3G1 203 aa8.61□□□□□ -1.03
CLK3-208ENST00000562626 GNGT2O14610 69 aa8.61□□□□□ -1.03
CLK3-208ENST00000562626 SIAH2O43255 324 aa8.61□□□□□ -1.03
CLK3-208ENST00000562626 TRMUO75648 421 aaKnown RBP8.61□□□□□ -1.03
CLK3-208ENST00000562626 SEC14L2O76054 403 aa8.61□□□□□ -1.03
CLK3-208ENST00000562626 SOX14O95416 240 aa8.61□□□□□ -1.03
CLK3-208ENST00000562626 PPP1R3DO95685 299 aa8.61□□□□□ -1.03
CLK3-208ENST00000562626 PGA4P0DJD7 388 aa8.61□□□□□ -1.03
CLK3-208ENST00000562626 PGA3P0DJD8 388 aa8.61□□□□□ -1.03
CLK3-208ENST00000562626 DNAJA1P31689 397 aaKnown RBP8.61□□□□□ -1.03
CLK3-208ENST00000562626 UGT2B10P36537 528 aa8.61□□□□□ -1.03
CLK3-208ENST00000562626 DAPP51397 102 aa8.61□□□□□ -1.03
CLK3-208ENST00000562626 MYBPC1Q00872 1141 aa8.61□□□□□ -1.03
CLK3-208ENST00000562626 FMODQ06828 376 aa8.61□□□□□ -1.03
CLK3-208ENST00000562626 MESTQ5EB52 335 aa8.61□□□□□ -1.03
CLK3-208ENST00000562626 SFRP5Q5T4F7 317 aa8.61□□□□□ -1.03
CLK3-208ENST00000562626 SP5Q6BEB4 398 aaPredicted RBP8.61□□□□□ -1.03
CLK3-208ENST00000562626 ZNF787Q6DD87 383 aa8.61□□□□□ -1.03
CLK3-208ENST00000562626 SHQ1Q6PI26 577 aaKnown RBP8.61□□□□□ -1.03
CLK3-208ENST00000562626 LRFN4Q6PJG9 635 aa8.61□□□□□ -1.03
CLK3-208ENST00000562626 MEX3BQ6ZN04 569 aaKnown RBP8.61□□□□□ -1.03
CLK3-208ENST00000562626 ZNF620Q6ZNG0 422 aa8.61□□□□□ -1.03
CLK3-208ENST00000562626 Q6ZT83 130 aa8.61□□□□□ -1.03
CLK3-208ENST00000562626 PTCHD4Q6ZW05 846 aa8.61□□□□□ -1.03
CLK3-208ENST00000562626 DMRTC2Q8IXT2 367 aaPredicted RBP8.61□□□□□ -1.03
CLK3-208ENST00000562626 UBE2J2Q8N2K1 259 aa8.61□□□□□ -1.03
CLK3-208ENST00000562626 ZNF433Q8N7K0 673 aaPredicted RBP8.61□□□□□ -1.03
CLK3-208ENST00000562626 OR4Q3Q8NH05 313 aa8.61□□□□□ -1.03
CLK3-208ENST00000562626 FANK1Q8TC84 345 aa8.61□□□□□ -1.03
CLK3-208ENST00000562626 GNPDA2Q8TDQ7 276 aa8.61□□□□□ -1.03
CLK3-208ENST00000562626 POP5Q969H6 163 aaKnown RBP8.61□□□□□ -1.03
CLK3-208ENST00000562626 TMEM54Q969K7 222 aa8.61□□□□□ -1.03
CLK3-208ENST00000562626 RASD2Q96D21 266 aa8.61□□□□□ -1.03
CLK3-208ENST00000562626 NMD3Q96D46 503 aaKnown RBP8.61□□□□□ -1.03
CLK3-208ENST00000562626 WFIKKN1Q96NZ8 548 aa8.61□□□□□ -1.03
CLK3-208ENST00000562626 DGCR6LQ9BY27 220 aa8.61□□□□□ -1.03
CLK3-208ENST00000562626 MRPL13Q9BYD1 178 aaKnown RBP8.61□□□□□ -1.03
CLK3-208ENST00000562626 TXNIPQ9H3M7 391 aa8.61□□□□□ -1.03
CLK3-208ENST00000562626 SMURF2Q9HAU4 748 aa8.61□□□□□ -1.03
CLK3-208ENST00000562626 GPR35Q9HC97 309 aa8.61□□□□□ -1.03
CLK3-208ENST00000562626 S100A14Q9HCY8 104 aa8.61□□□□□ -1.03
CLK3-208ENST00000562626 RCE1Q9Y256 329 aa8.61□□□□□ -1.03
CLK3-208ENST00000562626 LRBAP50851 2863 aa8.6□□□□□ -1.03
CLK3-208ENST00000562626 DSCAMO60469 2012 aa8.6□□□□□ -1.03
CLK3-208ENST00000562626 TEX13CA0A0J9YWL9 993 aa8.6□□□□□ -1.03
CLK3-208ENST00000562626 A0A1W2PR80 420 aa8.6□□□□□ -1.03
CLK3-208ENST00000562626 A0A1W2PRG6 482 aa8.6□□□□□ -1.03
CLK3-208ENST00000562626 HTR3EA5X5Y0 456 aa8.6□□□□□ -1.03
CLK3-208ENST00000562626 ZNF503-AS2A6NEH8 195 aa8.6□□□□□ -1.03
CLK3-208ENST00000562626 SAC3D1A6NKF1 404 aa8.6□□□□□ -1.03
CLK3-208ENST00000562626 HNRNPRO43390 633 aaKnown RBP8.6□□□□□ -1.03
CLK3-208ENST00000562626 MITFO75030 526 aaPredicted RBP8.6□□□□□ -1.03
CLK3-208ENST00000562626 DEAF1O75398 565 aaPredicted RBP8.6□□□□□ -1.03
CLK3-208ENST00000562626 E2F6O75461 281 aa8.6□□□□□ -1.03
CLK3-208ENST00000562626 RAD51DO75771 328 aa8.6□□□□□ -1.03
CLK3-208ENST00000562626 NDUFB2O95178 105 aa8.6□□□□□ -1.03
CLK3-208ENST00000562626 CD14P08571 375 aa8.6□□□□□ -1.03
CLK3-208ENST00000562626 FASP25445 335 aa8.6□□□□□ -1.03
CLK3-208ENST00000562626 RPL27P61353 136 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms