RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 MFSD13AQ14CX5 517 aa14.38□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 LINC01356Q8N9X3 169 aa14.38□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 SPDL1Q96EA4 605 aa14.38□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 C1orf159Q96HA4 380 aa14.38□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 EPYCQ99645 322 aa14.38□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 EBF4Q9BQW3 602 aa14.38□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 ASPNQ9BXN1 380 aa14.38□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 TMBIM4Q9HC24 238 aa14.38□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 MRPL39Q9NYK5 338 aaKnown RBP14.38□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 TMEFF2Q9UIK5 374 aaPredicted RBP14.38□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 NOX1Q9Y5S8 564 aa14.38□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 NBEAL1Q6ZS30 2694 aa14.38□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 GPX2P18283 190 aa14.37□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 PTDSS1P48651 473 aaKnown RBP14.37□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 EVX1P49640 407 aa14.37□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 IDH3AP50213 366 aa14.37□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 CDH12P55289 794 aa14.37□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 PUDPQ08623 228 aa14.37□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 PMS2P3Q13401 168 aa14.37□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 CCNIQ14094 377 aa14.37□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 ELFN2Q5R3F8 820 aa14.37□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 C7orf26Q96N11 449 aa14.37□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 FOXB1Q99853 325 aa14.37□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 ULBP2Q9BZM5 246 aa14.37□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 TMEM38AQ9H6F2 299 aa14.37□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 TMEM27Q9HBJ8 222 aa14.37□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 PRORSD1PA6NEY8 169 aa14.36□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 M0R233 179 aa14.36□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 PLPP3O14495 311 aa14.36□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 POLR3GO15318 223 aaPredicted RBP14.36□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 SYNGR3O43761 229 aa14.36□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 PPIBP23284 216 aaKnown RBP14.36□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 AHCYP23526 432 aa14.36□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 SLC6A2P23975 617 aa14.36□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 GLRXP35754 106 aa14.36□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 GIPRP48546 466 aa14.36□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 FXNQ16595 210 aa14.36□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 LINC00114Q6XXX2 140 aa14.36□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 PXKQ7Z7A4 578 aa14.36□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 LRP11Q86VZ4 500 aa14.36□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 ZNF607Q96SK3 696 aa14.36□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 SYT3Q9BQG1 590 aa14.36□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 TMEM43Q9BTV4 400 aa14.36□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 SLCO1B3Q9NPD5 702 aa14.36□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 B3GAT2Q9NPZ5 323 aa14.36□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 SELENONQ9NZV5 590 aa14.36□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 MYEF2Q9P2K5 600 aaKnown RBP14.36□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 REV1Q9UBZ9 1251 aa14.36□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 POFUT2Q9Y2G5 429 aa14.36□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 M0R3H8 397 aa14.35□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 HAX1O00165 279 aa14.35□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 TCF21O43680 179 aa14.35□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 ZNF500O60304 480 aaPredicted RBP14.35□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 SERPINI2O75830 405 aa14.35□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 MFN2O95140 757 aa14.35□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 TGDSO95455 350 aa14.35□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 HPXP02790 462 aa14.35□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 TCN1P20061 433 aaPredicted RBP14.35□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 ALDH3B1P43353 468 aa14.35□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 SEC24CP53992 1094 aa14.35□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 RAB1AP62820 205 aa14.35□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 TRMT5Q32P41 509 aaKnown RBP14.35□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 SWT1Q5T5J6 900 aaKnown RBP14.35□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 LIPNQ5VXI9 398 aa14.35□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 WDR88Q6ZMY6 472 aa14.35□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 RANBP3LQ86VV4 465 aaPredicted RBP14.35□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 CARM1Q86X55 608 aa14.35□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 ARMC8Q8IUR7 673 aa14.35□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 ZNF584Q8IVC4 421 aa14.35□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 RFLNBQ8N5W9 214 aa14.35□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 C10orf53Q8N6V4 93 aa14.35□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 SMYD1Q8NB12 490 aa14.35□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 HIPK4Q8NE63 616 aa14.35□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 BHLHE22Q8NFJ8 381 aaPredicted RBP14.35□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 OR6N1Q8NGY5 312 aa14.35□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 FGFBP3Q8TAT2 258 aa14.35□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 CPPED1Q9BRF8 314 aaPredicted RBP14.35□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 FZR1Q9UM11 496 aa14.35□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 SPEF1Q9Y4P9 236 aa14.35□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 ZNF726A6NNF4 738 aa14.34□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 C11orf98E9PRG8 122 aa14.34□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 SERPINB7O75635 380 aa14.34□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 RAB36O95755 333 aa14.34□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 PATE4P0C8F1 98 aa14.34□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 ITGA2P17301 1181 aa14.34□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 COL8A2P25067 703 aa14.34□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 DVL1P1P54792 670 aaPredicted RBP14.34□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 BIDP55957 195 aa14.34□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 RAB39AQ14964 217 aa14.34□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 MAD2L1BPQ15013 274 aaPredicted RBP14.34□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 NPTX1Q15818 432 aa14.34□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 GKAP1Q5VSY0 366 aaPredicted RBP14.34□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 DLEU7Q6UYE1 221 aa14.34□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 RINLQ6ZS11 566 aa14.34□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 PTOV1Q86YD1 416 aa14.34□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 SKA3Q8IX90 412 aa14.34□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 OR5J2Q8NH18 312 aa14.34□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 ARHGDIGQ99819 225 aa14.34□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 CCDC28BQ9BUN5 200 aa14.34□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 MS4A5Q9H3V2 200 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms