RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 ZNF519Q8TB69 540 aa11.81□□□□□ -0.52
CDH1-204ENST00000562118 MAGEE2Q8TD90 523 aaPredicted RBP11.81□□□□□ -0.52
CDH1-204ENST00000562118 HIST1H2ACQ93077 130 aa11.81□□□□□ -0.52
CDH1-204ENST00000562118 SLC25A44Q96H78 314 aaPredicted RBP11.81□□□□□ -0.52
CDH1-204ENST00000562118 WFIKKN1Q96NZ8 548 aa11.81□□□□□ -0.52
CDH1-204ENST00000562118 DGCR6LQ9BY27 220 aa11.81□□□□□ -0.52
CDH1-204ENST00000562118 TXNIPQ9H3M7 391 aa11.81□□□□□ -0.52
CDH1-204ENST00000562118 NELFAQ9H3P2 528 aa11.81□□□□□ -0.52
CDH1-204ENST00000562118 NTN4Q9HB63 628 aa11.81□□□□□ -0.52
CDH1-204ENST00000562118 KRCC1Q9NPI7 259 aaPredicted RBP11.81□□□□□ -0.52
CDH1-204ENST00000562118 INIPQ9NRY2 104 aa11.81□□□□□ -0.52
CDH1-204ENST00000562118 TRAV27A0A087WT01 109 aa11.8□□□□□ -0.52
CDH1-204ENST00000562118 C11orf98E9PRG8 122 aa11.8□□□□□ -0.52
CDH1-204ENST00000562118 BLOC1S5-TXNDC5H3BN57 136 aa11.8□□□□□ -0.52
CDH1-204ENST00000562118 TNFRSF11BO00300 401 aa11.8□□□□□ -0.52
CDH1-204ENST00000562118 RNF13O43567 381 aa11.8□□□□□ -0.52
CDH1-204ENST00000562118 OR6A2O95222 327 aa11.8□□□□□ -0.52
CDH1-204ENST00000562118 TXNDC12O95881 172 aa11.8□□□□□ -0.52
CDH1-204ENST00000562118 SAGP10523 405 aaPredicted RBP11.8□□□□□ -0.52
CDH1-204ENST00000562118 APEHP13798 732 aaKnown RBP11.8□□□□□ -0.52
CDH1-204ENST00000562118 IFNGR2P38484 337 aa11.8□□□□□ -0.52
CDH1-204ENST00000562118 DAP3P51398 398 aaKnown RBP11.8□□□□□ -0.52
CDH1-204ENST00000562118 SH3BGRP55822 239 aaPredicted RBP11.8□□□□□ -0.52
CDH1-204ENST00000562118 LGALS3BPQ08380 585 aa11.8□□□□□ -0.52
CDH1-204ENST00000562118 FAPQ12884 760 aa11.8□□□□□ -0.52
CDH1-204ENST00000562118 C1DQ13901 141 aaKnown RBP11.8□□□□□ -0.52
CDH1-204ENST00000562118 LAPTM4AQ15012 233 aa11.8□□□□□ -0.52
CDH1-204ENST00000562118 ACKR1Q16570 336 aa11.8□□□□□ -0.52
CDH1-204ENST00000562118 MICAQ29983 383 aa11.8□□□□□ -0.52
CDH1-204ENST00000562118 ALG10Q5BKT4 473 aa11.8□□□□□ -0.52
CDH1-204ENST00000562118 TIMM23BQ5SRD1 257 aa11.8□□□□□ -0.52
CDH1-204ENST00000562118 PHYHD1Q5SRE7 291 aa11.8□□□□□ -0.52
CDH1-204ENST00000562118 C1orf146Q5VVC0 180 aa11.8□□□□□ -0.52
CDH1-204ENST00000562118 FAM205BPQ63HN1 556 aa11.8□□□□□ -0.52
CDH1-204ENST00000562118 HDDC2Q7Z4H3 204 aa11.8□□□□□ -0.52
CDH1-204ENST00000562118 ABHD12BQ7Z5M8 362 aaPredicted RBP11.8□□□□□ -0.52
CDH1-204ENST00000562118 TMEM179BQ7Z7N9 219 aa11.8□□□□□ -0.52
CDH1-204ENST00000562118 MEX3DQ86XN8 651 aaKnown RBP11.8□□□□□ -0.52
CDH1-204ENST00000562118 CDK20Q8IZL9 346 aa11.8□□□□□ -0.52
CDH1-204ENST00000562118 CLDN22Q8N7P3 220 aa11.8□□□□□ -0.52
CDH1-204ENST00000562118 KISS1RQ969F8 398 aaPredicted RBP11.8□□□□□ -0.52
CDH1-204ENST00000562118 RSRC1Q96IZ7 334 aaKnown RBP11.8□□□□□ -0.52
CDH1-204ENST00000562118 TNFRSF13CQ96RJ3 184 aa11.8□□□□□ -0.52
CDH1-204ENST00000562118 KCNK17Q96T54 332 aa11.8□□□□□ -0.52
CDH1-204ENST00000562118 ACTR6Q9GZN1 396 aa11.8□□□□□ -0.52
CDH1-204ENST00000562118 YY1AP1Q9H869 796 aa11.8□□□□□ -0.52
CDH1-204ENST00000562118 GPR35Q9HC97 309 aa11.8□□□□□ -0.52
CDH1-204ENST00000562118 NRIP3Q9NQ35 241 aa11.8□□□□□ -0.52
CDH1-204ENST00000562118 DNAJB9Q9UBS3 223 aa11.8□□□□□ -0.52
CDH1-204ENST00000562118 AURKCQ9UQB9 309 aa11.8□□□□□ -0.52
CDH1-204ENST00000562118 OR5H1A6NKK0 313 aa11.79□□□□□ -0.52
CDH1-204ENST00000562118 DEFB108AA8MXU0 73 aa11.79□□□□□ -0.52
CDH1-204ENST00000562118 MCIDASD6RGH6 385 aa11.79□□□□□ -0.52
CDH1-204ENST00000562118 SIAH2O43255 324 aa11.79□□□□□ -0.52
CDH1-204ENST00000562118 NDUFB2O95178 105 aa11.79□□□□□ -0.52
CDH1-204ENST00000562118 CST1P01037 141 aa11.79□□□□□ -0.52
CDH1-204ENST00000562118 IGHV3-9P01782 118 aa11.79□□□□□ -0.52
CDH1-204ENST00000562118 TP53P04637 393 aaPredicted RBP11.79□□□□□ -0.52
CDH1-204ENST00000562118 F13BP05160 661 aa11.79□□□□□ -0.52
CDH1-204ENST00000562118 CD14P08571 375 aa11.79□□□□□ -0.52
CDH1-204ENST00000562118 AHCYP23526 432 aa11.79□□□□□ -0.52
CDH1-204ENST00000562118 BIDP55957 195 aa11.79□□□□□ -0.52
CDH1-204ENST00000562118 RPL27P61353 136 aaKnown RBP11.79□□□□□ -0.52
CDH1-204ENST00000562118 RUNX1T1Q06455 604 aa11.79□□□□□ -0.52
CDH1-204ENST00000562118 C10orf128Q5T292 105 aa11.79□□□□□ -0.52
CDH1-204ENST00000562118 OR7E24Q6IFN5 339 aa11.79□□□□□ -0.52
CDH1-204ENST00000562118 THSD4Q6ZMP0 1018 aa11.79□□□□□ -0.52
CDH1-204ENST00000562118 ZNF620Q6ZNG0 422 aa11.79□□□□□ -0.52
CDH1-204ENST00000562118 RRM2BQ7LG56 351 aa11.79□□□□□ -0.52
CDH1-204ENST00000562118 BHLHA15Q7RTS1 189 aaPredicted RBP11.79□□□□□ -0.52
CDH1-204ENST00000562118 OR9Q2Q8NGE9 314 aa11.79□□□□□ -0.52
CDH1-204ENST00000562118 LINC01560Q8TB33 94 aa11.79□□□□□ -0.52
CDH1-204ENST00000562118 HSD17B8Q92506 261 aa11.79□□□□□ -0.52
CDH1-204ENST00000562118 MARVELD3Q96A59 401 aa11.79□□□□□ -0.52
CDH1-204ENST00000562118 S100PBPQ96BU1 408 aa11.79□□□□□ -0.52
CDH1-204ENST00000562118 NRBF2Q96F24 287 aa11.79□□□□□ -0.52
CDH1-204ENST00000562118 ALKBH3Q96Q83 286 aaPredicted RBP11.79□□□□□ -0.52
CDH1-204ENST00000562118 TSPAN32Q96QS1 320 aa11.79□□□□□ -0.52
CDH1-204ENST00000562118 EMC6Q9BV81 110 aa11.79□□□□□ -0.52
CDH1-204ENST00000562118 REEP1Q9H902 201 aa11.79□□□□□ -0.52
CDH1-204ENST00000562118 IL20Q9NYY1 176 aa11.79□□□□□ -0.52
CDH1-204ENST00000562118 STX18Q9P2W9 335 aaKnown RBP11.79□□□□□ -0.52
CDH1-204ENST00000562118 NDRG3Q9UGV2 375 aa11.79□□□□□ -0.52
CDH1-204ENST00000562118 TMCC3Q9ULS5 477 aa11.79□□□□□ -0.52
CDH1-204ENST00000562118 SAMHD1Q9Y3Z3 626 aaKnown RBP11.79□□□□□ -0.52
CDH1-204ENST00000562118 ABCA4P78363 2273 aa11.79□□□□□ -0.52
CDH1-204ENST00000562118 AKAP9Q99996 3911 aa11.78□□□□□ -0.52
CDH1-204ENST00000562118 ARPC4-TTLL3A0A0A6YYG9 625 aa11.78□□□□□ -0.52
CDH1-204ENST00000562118 A0A1W2PRG6 482 aa11.78□□□□□ -0.52
CDH1-204ENST00000562118 UNC119BA6NIH7 251 aa11.78□□□□□ -0.52
CDH1-204ENST00000562118 A6NNC1 897 aa11.78□□□□□ -0.52
CDH1-204ENST00000562118 ZNF587BE7ETH6 402 aa11.78□□□□□ -0.52
CDH1-204ENST00000562118 ARPC3O15145 178 aa11.78□□□□□ -0.52
CDH1-204ENST00000562118 AHCYL1O43865 530 aa11.78□□□□□ -0.52
CDH1-204ENST00000562118 OR10H3O60404 316 aa11.78□□□□□ -0.52
CDH1-204ENST00000562118 TRMUO75648 421 aaKnown RBP11.78□□□□□ -0.52
CDH1-204ENST00000562118 LYZL6O75951 148 aa11.78□□□□□ -0.52
CDH1-204ENST00000562118 CCNB2O95067 398 aa11.78□□□□□ -0.52
CDH1-204ENST00000562118 BCL10O95999 233 aa11.78□□□□□ -0.52
CDH1-204ENST00000562118 PRF1P14222 555 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms