RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 ING5Q8WYH8 240 aa6.65□□□□□ -1.34
CDH1-203ENST00000561751 OR8D1Q8WZ84 308 aa6.65□□□□□ -1.34
CDH1-203ENST00000561751 MAL2Q969L2 176 aa6.65□□□□□ -1.34
CDH1-203ENST00000561751 SLC25A28Q96A46 364 aa6.65□□□□□ -1.34
CDH1-203ENST00000561751 PPCDCQ96CD2 204 aa6.65□□□□□ -1.34
CDH1-203ENST00000561751 NEURL3Q96EH8 262 aa6.65□□□□□ -1.34
CDH1-203ENST00000561751 MRGPRX4Q96LA9 322 aa6.65□□□□□ -1.34
CDH1-203ENST00000561751 PRRC1Q96M27 445 aa6.65□□□□□ -1.34
CDH1-203ENST00000561751 NECAB3Q96P71 396 aaPredicted RBP6.65□□□□□ -1.34
CDH1-203ENST00000561751 SERINC2Q96SA4 455 aa6.65□□□□□ -1.34
CDH1-203ENST00000561751 TIMP4Q99727 224 aa6.65□□□□□ -1.34
CDH1-203ENST00000561751 SEMA3CQ99985 751 aa6.65□□□□□ -1.34
CDH1-203ENST00000561751 SULT4A1Q9BR01 284 aa6.65□□□□□ -1.34
CDH1-203ENST00000561751 FNDC11Q9BVV2 318 aa6.65□□□□□ -1.34
CDH1-203ENST00000561751 SLC12A9Q9BXP2 914 aa6.65□□□□□ -1.34
CDH1-203ENST00000561751 POTEKPQ9BYX7 375 aa6.65□□□□□ -1.34
CDH1-203ENST00000561751 DPH1Q9BZG8 443 aa6.65□□□□□ -1.34
CDH1-203ENST00000561751 NMES1Q9C002 83 aa6.65□□□□□ -1.34
CDH1-203ENST00000561751 ATG5Q9H1Y0 275 aa6.65□□□□□ -1.34
CDH1-203ENST00000561751 EPHX3Q9H6B9 360 aa6.65□□□□□ -1.34
CDH1-203ENST00000561751 ZFYVE1Q9HBF4 777 aa6.65□□□□□ -1.34
CDH1-203ENST00000561751 BEX1Q9HBH7 125 aa6.65□□□□□ -1.34
CDH1-203ENST00000561751 BCL2L10Q9HD36 194 aa6.65□□□□□ -1.34
CDH1-203ENST00000561751 PRDM7Q9NQW5 492 aa6.65□□□□□ -1.34
CDH1-203ENST00000561751 DOK5Q9P104 306 aa6.65□□□□□ -1.34
CDH1-203ENST00000561751 TRPC4Q9UBN4 977 aa6.65□□□□□ -1.34
CDH1-203ENST00000561751 SHPKQ9UHJ6 478 aa6.65□□□□□ -1.34
CDH1-203ENST00000561751 KCNG2Q9UJ96 466 aa6.65□□□□□ -1.34
CDH1-203ENST00000561751 A4GNTQ9UNA3 340 aa6.65□□□□□ -1.34
CDH1-203ENST00000561751 STARD10Q9Y365 291 aa6.65□□□□□ -1.34
CDH1-203ENST00000561751 MRPS18CQ9Y3D5 142 aaKnown RBP6.65□□□□□ -1.34
CDH1-203ENST00000561751 MMACHCQ9Y4U1 282 aa6.65□□□□□ -1.34
CDH1-203ENST00000561751 VCANP13611 3396 aa6.65□□□□□ -1.35
CDH1-203ENST00000561751 PLXNA1Q9UIW2 1896 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 SPTBN5Q9NRC6 3674 aaKnown RBP6.64□□□□□ -1.35
CDH1-203ENST00000561751 TRBV5-4A0A0C4DH59 114 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 DAPL1A0PJW8 107 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 IFITM5A6NNB3 132 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 ZNF705EA8MWA4 302 aaPredicted RBP6.64□□□□□ -1.35
CDH1-203ENST00000561751 FOXE1O00358 373 aaPredicted RBP6.64□□□□□ -1.35
CDH1-203ENST00000561751 GPR182O15218 404 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 YY2O15391 372 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 OR10H2O60403 315 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 CBR3O75828 277 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 LRATO95237 230 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 SOX14O95416 240 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 PLGP00747 810 aaPredicted RBP6.64□□□□□ -1.35
CDH1-203ENST00000561751 FGBP02675 491 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 RLN1P04808 185 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 CTSLP07711 333 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 ALPPL2P10696 532 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 CCL5P13501 91 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 AQP1P29972 269 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 TIA1P31483 386 aaKnown RBP eCLIP6.64□□□□□ -1.35
CDH1-203ENST00000561751 MC4RP32245 332 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 GRK4P32298 578 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 PPICP45877 212 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 CDKN1BP46527 198 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 OMPP47874 163 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 CX3CR1P49238 355 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 ACTBP60709 375 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 UBE2MP61081 183 aaKnown RBP6.64□□□□□ -1.35
CDH1-203ENST00000561751 PPP2CBP62714 309 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 ACTG1P63261 375 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 PPP2CAP67775 309 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 TWF1Q12792 350 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 SKP2Q13309 424 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 DOC2AQ14183 400 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 GAMTQ14353 236 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 IHHQ14623 411 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 SURF2Q15527 256 aaPredicted RBP6.64□□□□□ -1.35
CDH1-203ENST00000561751 USF2Q15853 346 aaPredicted RBP6.64□□□□□ -1.35
CDH1-203ENST00000561751 CPSF6Q16630 551 aaKnown RBP eCLIP6.64□□□□□ -1.35
CDH1-203ENST00000561751 SLC25A35Q3KQZ1 300 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 PLEKHN1Q494U1 663 aaPredicted RBP6.64□□□□□ -1.35
CDH1-203ENST00000561751 DCAF12L2Q5VW00 463 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 C18orf63Q68DL7 685 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 ABLIM2Q6H8Q1 611 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 ADAM5Q6NVV9 412 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 RPL22L1Q6P5R6 122 aaKnown RBP6.64□□□□□ -1.35
CDH1-203ENST00000561751 LCTLQ6UWM7 567 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 BTNL3Q6UXE8 466 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 ZNF574Q6ZN55 896 aaPredicted RBP6.64□□□□□ -1.35
CDH1-203ENST00000561751 DPPA4Q7L190 304 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 OTOP2Q7RTS6 562 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 PRSS45Q7RTY3 260 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 GLT6D1Q7Z4J2 308 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 TRAPPC5Q8IUR0 188 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 LRRC18Q8N456 261 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 PAQR4Q8N4S7 273 aaPredicted RBP6.64□□□□□ -1.35
CDH1-203ENST00000561751 ZFP41Q8N8Y5 198 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 ACOT4Q8N9L9 421 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 TMEM229BQ8NBD8 167 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 PAQR8Q8TEZ7 354 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 GCDHQ92947 438 aaPredicted RBP6.64□□□□□ -1.35
CDH1-203ENST00000561751 FOXRED1Q96CU9 486 aaPredicted RBP6.64□□□□□ -1.35
CDH1-203ENST00000561751 CMBLQ96DG6 245 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 FAM122AQ96E09 287 aa6.64□□□□□ -1.35
CDH1-203ENST00000561751 RCC1LQ96I51 464 aaKnown RBP6.64□□□□□ -1.35
CDH1-203ENST00000561751 ADGRG7Q96K78 797 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms