RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 IGHV4-30-2A0A087WSY4 118 aa13.9□□□□□ -0.18
LMX1B-204ENST00000561065 A0A096LPE4 126 aa13.9□□□□□ -0.18
LMX1B-204ENST00000561065 A0A1W2PPZ6 126 aa13.9□□□□□ -0.18
LMX1B-204ENST00000561065 CXCR6O00574 342 aa13.9□□□□□ -0.18
LMX1B-204ENST00000561065 LYPD3O95274 346 aa13.9□□□□□ -0.18
LMX1B-204ENST00000561065 IGF2P01344 180 aa13.9□□□□□ -0.18
LMX1B-204ENST00000561065 THY1P04216 161 aa13.9□□□□□ -0.18
LMX1B-204ENST00000561065 IFNW1P05000 195 aa13.9□□□□□ -0.18
LMX1B-204ENST00000561065 UMPSP11172 480 aa13.9□□□□□ -0.18
LMX1B-204ENST00000561065 HLA-DOBP13765 273 aa13.9□□□□□ -0.18
LMX1B-204ENST00000561065 FABP6P51161 128 aa13.9□□□□□ -0.18
LMX1B-204ENST00000561065 SLC7A2P52569 658 aa13.9□□□□□ -0.18
LMX1B-204ENST00000561065 UBE2NP61088 152 aaKnown RBP13.9□□□□□ -0.18
LMX1B-204ENST00000561065 PSME3P61289 254 aa13.9□□□□□ -0.18
LMX1B-204ENST00000561065 ROR2Q01974 943 aaKnown RBP13.9□□□□□ -0.18
LMX1B-204ENST00000561065 PHYHD1Q5SRE7 291 aa13.9□□□□□ -0.18
LMX1B-204ENST00000561065 GKAP1Q5VSY0 366 aaPredicted RBP13.9□□□□□ -0.18
LMX1B-204ENST00000561065 ZNF544Q6NX49 715 aa13.9□□□□□ -0.18
LMX1B-204ENST00000561065 WDR88Q6ZMY6 472 aa13.9□□□□□ -0.18
LMX1B-204ENST00000561065 DEF8Q6ZN54 512 aa13.9□□□□□ -0.18
LMX1B-204ENST00000561065 RRM2BQ7LG56 351 aa13.9□□□□□ -0.18
LMX1B-204ENST00000561065 HDDC2Q7Z4H3 204 aa13.9□□□□□ -0.18
LMX1B-204ENST00000561065 PIGWQ7Z7B1 504 aa13.9□□□□□ -0.18
LMX1B-204ENST00000561065 CYP4Z1Q86W10 505 aa13.9□□□□□ -0.18
LMX1B-204ENST00000561065 CDK20Q8IZL9 346 aa13.9□□□□□ -0.18
LMX1B-204ENST00000561065 LRR1Q96L50 414 aa13.9□□□□□ -0.18
LMX1B-204ENST00000561065 ADAD1Q96M93 576 aaKnown RBP13.9□□□□□ -0.18
LMX1B-204ENST00000561065 OR2M2Q96R28 347 aa13.9□□□□□ -0.18
LMX1B-204ENST00000561065 CMTM6Q9NX76 183 aa13.9□□□□□ -0.18
LMX1B-204ENST00000561065 ADA2Q9NZK5 511 aa13.9□□□□□ -0.18
LMX1B-204ENST00000561065 RIMS3Q9UJD0 308 aa13.9□□□□□ -0.18
LMX1B-204ENST00000561065 ZNF229Q9UJW7 825 aa13.9□□□□□ -0.18
LMX1B-204ENST00000561065 ATP23Q9Y6H3 246 aa13.9□□□□□ -0.18
LMX1B-204ENST00000561065 ARPC4-TTLL3A0A0A6YYG9 625 aa13.9□□□□□ -0.19
LMX1B-204ENST00000561065 MS4A18H0YCH9 400 aa13.9□□□□□ -0.19
LMX1B-204ENST00000561065 RPL36A-HNRNPH2H7BZ11 118 aa13.9□□□□□ -0.19
LMX1B-204ENST00000561065 SSX4O60224 188 aa13.9□□□□□ -0.19
LMX1B-204ENST00000561065 SEC14L2O76054 403 aa13.9□□□□□ -0.19
LMX1B-204ENST00000561065 ZNF682O95780 498 aa13.9□□□□□ -0.19
LMX1B-204ENST00000561065 ADORA3P0DMS8 318 aa13.9□□□□□ -0.19
LMX1B-204ENST00000561065 MS4A18Q3C1V0 323 aa13.9□□□□□ -0.19
LMX1B-204ENST00000561065 SPATS1Q496A3 300 aa13.9□□□□□ -0.19
LMX1B-204ENST00000561065 NHLRC1Q6VVB1 395 aa13.9□□□□□ -0.19
LMX1B-204ENST00000561065 TREML1Q86YW5 311 aa13.9□□□□□ -0.19
LMX1B-204ENST00000561065 RBM45Q8IUH3 476 aaKnown RBP13.9□□□□□ -0.19
LMX1B-204ENST00000561065 FBXL14Q8N1E6 418 aa13.9□□□□□ -0.19
LMX1B-204ENST00000561065 ANKS4BQ8N8V4 417 aa13.9□□□□□ -0.19
LMX1B-204ENST00000561065 GEMIN6Q8WXD5 167 aaKnown RBP13.9□□□□□ -0.19
LMX1B-204ENST00000561065 FAM162AQ96A26 154 aa13.9□□□□□ -0.19
LMX1B-204ENST00000561065 SLC38A2Q96QD8 506 aa13.9□□□□□ -0.19
LMX1B-204ENST00000561065 KCNS3Q9BQ31 491 aa13.9□□□□□ -0.19
LMX1B-204ENST00000561065 FNDC11Q9BVV2 318 aa13.9□□□□□ -0.19
LMX1B-204ENST00000561065 BARX1Q9HBU1 254 aaPredicted RBP13.9□□□□□ -0.19
LMX1B-204ENST00000561065 STX18Q9P2W9 335 aaKnown RBP13.9□□□□□ -0.19
LMX1B-204ENST00000561065 CRNNQ9UBG3 495 aaPredicted RBP13.9□□□□□ -0.19
LMX1B-204ENST00000561065 TAGLN3Q9UI15 199 aa13.9□□□□□ -0.19
LMX1B-204ENST00000561065 MED31Q9Y3C7 131 aa13.9□□□□□ -0.19
LMX1B-204ENST00000561065 FAM32AQ9Y421 112 aaKnown RBP13.9□□□□□ -0.19
LMX1B-204ENST00000561065 VSTM5A8MXK1 200 aa13.89□□□□□ -0.19
LMX1B-204ENST00000561065 H7C417 338 aa13.89□□□□□ -0.19
LMX1B-204ENST00000561065 PLPP3O14495 311 aa13.89□□□□□ -0.19
LMX1B-204ENST00000561065 CH25HO95992 272 aa13.89□□□□□ -0.19
LMX1B-204ENST00000561065 IGLV1-44P01699 117 aa13.89□□□□□ -0.19
LMX1B-204ENST00000561065 MT-ND1P03886 318 aa13.89□□□□□ -0.19
LMX1B-204ENST00000561065 CELA3BP08861 270 aa13.89□□□□□ -0.19
LMX1B-204ENST00000561065 CECR9P0C854 216 aa13.89□□□□□ -0.19
LMX1B-204ENST00000561065 BMP4P12644 408 aa13.89□□□□□ -0.19
LMX1B-204ENST00000561065 CALCRP30988 508 aa13.89□□□□□ -0.19
LMX1B-204ENST00000561065 NUDT6P53370 316 aa13.89□□□□□ -0.19
LMX1B-204ENST00000561065 ARF1P84077 181 aaKnown RBP13.89□□□□□ -0.19
LMX1B-204ENST00000561065 MXRA7P84157 204 aa13.89□□□□□ -0.19
LMX1B-204ENST00000561065 ZP4Q12836 540 aa13.89□□□□□ -0.19
LMX1B-204ENST00000561065 TAF11Q15544 211 aa13.89□□□□□ -0.19
LMX1B-204ENST00000561065 MST1LQ2TV78 715 aa13.89□□□□□ -0.19
LMX1B-204ENST00000561065 CEACAM16Q2WEN9 425 aa13.89□□□□□ -0.19
LMX1B-204ENST00000561065 IFI44LQ53G44 452 aa13.89□□□□□ -0.19
LMX1B-204ENST00000561065 ANKRD16Q6P6B7 361 aa13.89□□□□□ -0.19
LMX1B-204ENST00000561065 C16orf89Q6UX73 402 aa13.89□□□□□ -0.19
LMX1B-204ENST00000561065 ZNF525Q8N782 197 aa13.89□□□□□ -0.19
LMX1B-204ENST00000561065 MAGEE2Q8TD90 523 aaPredicted RBP13.89□□□□□ -0.19
LMX1B-204ENST00000561065 TMEM239Q8WW34 195 aa13.89□□□□□ -0.19
LMX1B-204ENST00000561065 EMC6Q9BV81 110 aa13.89□□□□□ -0.19
LMX1B-204ENST00000561065 GPR35Q9HC97 309 aa13.89□□□□□ -0.19
LMX1B-204ENST00000561065 MED29Q9NX70 200 aa13.89□□□□□ -0.19
LMX1B-204ENST00000561065 ADAM21Q9UKJ8 722 aa13.89□□□□□ -0.19
LMX1B-204ENST00000561065 SVEP1Q4LDE5 3571 aa13.89□□□□□ -0.19
LMX1B-204ENST00000561065 RNF13O43567 381 aa13.88□□□□□ -0.19
LMX1B-204ENST00000561065 LY6HO94772 140 aa13.88□□□□□ -0.19
LMX1B-204ENST00000561065 IGKV3-15P01624 115 aa13.88□□□□□ -0.19
LMX1B-204ENST00000561065 OR1E2P47887 323 aa13.88□□□□□ -0.19
LMX1B-204ENST00000561065 GSK3BP49841 420 aa13.88□□□□□ -0.19
LMX1B-204ENST00000561065 GYS2P54840 703 aa13.88□□□□□ -0.19
LMX1B-204ENST00000561065 NAAAQ02083 359 aa13.88□□□□□ -0.19
LMX1B-204ENST00000561065 POU3F1Q03052 451 aaPredicted RBP13.88□□□□□ -0.19
LMX1B-204ENST00000561065 ZNF74Q16587 644 aa13.88□□□□□ -0.19
LMX1B-204ENST00000561065 SAMD4BQ5PRF9 694 aaKnown RBP13.88□□□□□ -0.19
LMX1B-204ENST00000561065 C8orf82Q6P1X6 216 aaPredicted RBP13.88□□□□□ -0.19
LMX1B-204ENST00000561065 RNF113BQ8IZP6 322 aaKnown RBP13.88□□□□□ -0.19
LMX1B-204ENST00000561065 OR10H5Q8NGA6 315 aa13.88□□□□□ -0.19
LMX1B-204ENST00000561065 OR6N1Q8NGY5 312 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms