RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 PSMB10P40306 273 aa5.24□□□□□ -1.57
HERC1-208ENST00000560462 PCP4P48539 62 aa5.24□□□□□ -1.57
HERC1-208ENST00000560462 VPS41P49754 854 aa5.24□□□□□ -1.57
HERC1-208ENST00000560462 FOXA1P55317 472 aa5.24□□□□□ -1.57
HERC1-208ENST00000560462 RPS7P62081 194 aaKnown RBP5.24□□□□□ -1.57
HERC1-208ENST00000560462 TPM4P67936 248 aa5.24□□□□□ -1.57
HERC1-208ENST00000560462 PDK3Q15120 406 aa5.24□□□□□ -1.57
HERC1-208ENST00000560462 TRMT12Q53H54 448 aaKnown RBP5.24□□□□□ -1.57
HERC1-208ENST00000560462 RBM20Q5T481 1227 aaKnown RBP5.24□□□□□ -1.57
HERC1-208ENST00000560462 NPSR1Q6W5P4 371 aa5.24□□□□□ -1.57
HERC1-208ENST00000560462 CALHM3Q86XJ0 350 aa5.24□□□□□ -1.57
HERC1-208ENST00000560462 IZUMO1Q8IYV9 350 aa5.24□□□□□ -1.57
HERC1-208ENST00000560462 Q8N1X5 172 aa5.24□□□□□ -1.57
HERC1-208ENST00000560462 OR4N2Q8NGD1 307 aa5.24□□□□□ -1.57
HERC1-208ENST00000560462 OR4K14Q8NGD5 310 aa5.24□□□□□ -1.57
HERC1-208ENST00000560462 OR56A1Q8NGH5 318 aa5.24□□□□□ -1.57
HERC1-208ENST00000560462 ACTRT2Q8TDY3 377 aa5.24□□□□□ -1.57
HERC1-208ENST00000560462 FAM120BQ96EK7 910 aaKnown RBP5.24□□□□□ -1.57
HERC1-208ENST00000560462 THOC1Q96FV9 657 aaKnown RBP5.24□□□□□ -1.57
HERC1-208ENST00000560462 NR1H4Q96RI1 486 aaPredicted RBP5.24□□□□□ -1.57
HERC1-208ENST00000560462 NEU1Q99519 415 aa5.24□□□□□ -1.57
HERC1-208ENST00000560462 SSBP3Q9BWW4 388 aaPredicted RBP5.24□□□□□ -1.57
HERC1-208ENST00000560462 MS4A8Q9BY19 250 aa5.24□□□□□ -1.57
HERC1-208ENST00000560462 CHRAC1Q9NRG0 131 aa5.24□□□□□ -1.57
HERC1-208ENST00000560462 MAT2BQ9NZL9 334 aa5.24□□□□□ -1.57
HERC1-208ENST00000560462 LCMT1Q9UIC8 334 aa5.24□□□□□ -1.57
HERC1-208ENST00000560462 ZNF490Q9ULM2 529 aaPredicted RBP5.24□□□□□ -1.57
HERC1-208ENST00000560462 DYNC1H1Q14204 4646 aaKnown RBP5.24□□□□□ -1.57
HERC1-208ENST00000560462 A0A087X0T9 212 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 IGHV1-69DA0A0B4J2H0 117 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 FAM90A7PA6NKC0 464 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 SH2D7A6NKC9 451 aaPredicted RBP5.23□□□□□ -1.57
HERC1-208ENST00000560462 SDR42E2A6NKP2 422 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 ZNF716A6NP11 495 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 FAM90A22PA8MWA6 464 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 FAM90A12PA8MX19 464 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 FAM90A23PA8MXZ1 464 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 GOLGA8KD6RF30 607 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 PRR23D1E9PI22 279 aaPredicted RBP5.23□□□□□ -1.57
HERC1-208ENST00000560462 F5H697 171 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 GOLGA8TH3BQL2 631 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 KIF2AO00139 706 aaPredicted RBP5.23□□□□□ -1.57
HERC1-208ENST00000560462 P2RY10O00398 339 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 NR5A2O00482 541 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 EFNA2O43921 213 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 VAPBO95292 243 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 METTL18O95568 372 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 IGHV1-69P01742 117 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 GYPCP04921 128 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 SERPING1P05155 500 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 FAM228BP0C875 321 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 PRR23D2P0DMB1 279 aaPredicted RBP5.23□□□□□ -1.57
HERC1-208ENST00000560462 TMEM225BP0DP42 221 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 ZNF14P17017 642 aaPredicted RBP5.23□□□□□ -1.57
HERC1-208ENST00000560462 MAKP20794 623 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 GLRXP35754 106 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 RGS4P49798 205 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 RAP1GDS1P52306 607 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 RPS23P62266 143 aaKnown RBP5.23□□□□□ -1.57
HERC1-208ENST00000560462 CRADDP78560 199 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 ZBED6P86452 979 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 ZNF763Q0D2J5 394 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 ZNF155Q12901 538 aaPredicted RBP5.23□□□□□ -1.57
HERC1-208ENST00000560462 FOXF1Q12946 379 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 NPRL3Q12980 569 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 TAF11Q15544 211 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 TMEM155Q4W5P6 130 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 XP32Q5T750 250 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 TSPO2Q5TGU0 170 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 PAQR6Q6TCH4 344 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 PPP1R21Q6ZMI0 780 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 LINC00336Q6ZUF6 198 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 PIWIL3Q7Z3Z3 882 aaKnown RBP5.23□□□□□ -1.57
HERC1-208ENST00000560462 Q8N3U1 123 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 ZCCHC7Q8N3Z6 543 aaKnown RBP5.23□□□□□ -1.57
HERC1-208ENST00000560462 TMCO5AQ8N6Q1 288 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 OR1K1Q8NGR3 316 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 OR5R1Q8NH85 324 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 RFWD2Q8NHY2 731 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 KIF18AQ8NI77 898 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 CCDC126Q96EE4 140 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 DDOQ99489 341 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 DCTN5Q9BTE1 182 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 HHATLQ9HCP6 504 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 TREX1Q9NSU2 369 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 TMEM45AQ9NWC5 275 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 TAAR3PQ9P1P4 343 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 ZNRD1Q9P1U0 126 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 KCNE5Q9UJ90 142 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 ASB4Q9Y574 426 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 NPTNQ9Y639 398 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 BZW2Q9Y6E2 419 aaKnown RBP5.23□□□□□ -1.57
HERC1-208ENST00000560462 DSPPQ9NZW4 1301 aa5.23□□□□□ -1.57
HERC1-208ENST00000560462 NME6O75414 186 aaPredicted RBP5.22□□□□□ -1.57
HERC1-208ENST00000560462 ATP1B1P05026 303 aa5.22□□□□□ -1.57
HERC1-208ENST00000560462 FBP1P09467 338 aa5.22□□□□□ -1.57
HERC1-208ENST00000560462 LINGO3P0C6S8 592 aa5.22□□□□□ -1.57
HERC1-208ENST00000560462 FAM58BPP0C7Q3 252 aa5.22□□□□□ -1.57
HERC1-208ENST00000560462 THRBP10828 461 aa5.22□□□□□ -1.57
HERC1-208ENST00000560462 CBR1P16152 277 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms