RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 TMEM38AQ9H6F2 299 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 LANCL2Q9NS86 450 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 A6NIN4 97 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 TAS2R19P59542 299 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 PPP2CBP62714 309 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 PPP2CAP67775 309 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 ZNF92Q03936 586 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 BAHD1Q8TBE0 780 aaPredicted RBP12.41□□□□□ -0.42
TRAF3-208ENST00000560371 BRIX1Q8TDN6 353 aaKnown RBP12.41□□□□□ -0.42
TRAF3-208ENST00000560371 MVB12AQ96EY5 273 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 OCSTAMPQ9BR26 566 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 P2RX6O15547 441 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 IFNA10P01566 189 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 TMEM196Q5HYL7 178 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 KANSL1Q7Z3B3 1105 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 TMEM106AQ96A25 262 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 HRASLSQ9HDD0 168 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 FBXO7Q9Y3I1 522 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 FIGNL2A6NMB9 653 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 KCNK2O95069 426 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 UBCP0CG48 685 aaKnown RBP12.41□□□□□ -0.42
TRAF3-208ENST00000560371 GPR3P46089 330 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 FCRLAQ7L513 359 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 OR2T35Q8NGX2 323 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 LINC01599Q8WXQ3 324 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 C8orf44Q96CB5 159 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 NDRG3Q9UGV2 375 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 TCRBV5S1A1TA0A578 114 aa12.4□□□□□ -0.42
TRAF3-208ENST00000560371 EIF4E2O60573 245 aaKnown RBP12.4□□□□□ -0.42
TRAF3-208ENST00000560371 GRPP07492 148 aa12.4□□□□□ -0.42
TRAF3-208ENST00000560371 EPHA5P54756 1037 aa12.4□□□□□ -0.42
TRAF3-208ENST00000560371 EDDM3BP56851 147 aa12.4□□□□□ -0.42
TRAF3-208ENST00000560371 FOXC1Q12948 553 aa12.4□□□□□ -0.42
TRAF3-208ENST00000560371 LSMEM2Q8N112 164 aa12.4□□□□□ -0.42
TRAF3-208ENST00000560371 CPEB3Q8NE35 698 aaKnown RBP12.4□□□□□ -0.42
TRAF3-208ENST00000560371 OR5M1Q8NGP8 315 aa12.4□□□□□ -0.42
TRAF3-208ENST00000560371 C11orf40Q8WZ69 217 aa12.4□□□□□ -0.42
TRAF3-208ENST00000560371 CACNG2Q9Y698 323 aa12.4□□□□□ -0.42
TRAF3-208ENST00000560371 ANKRD33BA6NCL7 494 aa12.4□□□□□ -0.42
TRAF3-208ENST00000560371 GABRA5P31644 462 aa12.4□□□□□ -0.42
TRAF3-208ENST00000560371 CRMP1Q14194 572 aa12.4□□□□□ -0.42
TRAF3-208ENST00000560371 ANKRD13BQ86YJ7 626 aa12.4□□□□□ -0.42
TRAF3-208ENST00000560371 KDM8Q8N371 416 aa12.4□□□□□ -0.42
TRAF3-208ENST00000560371 OR13C9Q8NGT0 318 aa12.4□□□□□ -0.42
TRAF3-208ENST00000560371 AKR7A3O95154 331 aa12.4□□□□□ -0.42
TRAF3-208ENST00000560371 PAHP00439 452 aa12.4□□□□□ -0.42
TRAF3-208ENST00000560371 NID1P14543 1247 aa12.4□□□□□ -0.42
TRAF3-208ENST00000560371 CD22P20273 847 aa12.4□□□□□ -0.42
TRAF3-208ENST00000560371 VEGFCP49767 419 aa12.4□□□□□ -0.42
TRAF3-208ENST00000560371 OR5D18Q8NGL1 313 aa12.4□□□□□ -0.42
TRAF3-208ENST00000560371 RAB3CQ96E17 227 aa12.4□□□□□ -0.42
TRAF3-208ENST00000560371 HYLS1Q96M11 299 aa12.4□□□□□ -0.42
TRAF3-208ENST00000560371 P2RY12Q9H244 342 aa12.4□□□□□ -0.42
TRAF3-208ENST00000560371 ARPC5O15511 151 aa12.4□□□□□ -0.42
TRAF3-208ENST00000560371 PPIAP62937 165 aaKnown RBP12.4□□□□□ -0.42
TRAF3-208ENST00000560371 PRICKLE2Q7Z3G6 844 aa12.4□□□□□ -0.42
TRAF3-208ENST00000560371 OR56B1Q8NGI3 324 aa12.4□□□□□ -0.42
TRAF3-208ENST00000560371 TMEM255BQ8WV15 326 aa12.4□□□□□ -0.42
TRAF3-208ENST00000560371 MUL1Q969V5 352 aa12.4□□□□□ -0.42
TRAF3-208ENST00000560371 LIN7BQ9HAP6 207 aa12.4□□□□□ -0.42
TRAF3-208ENST00000560371 SNCAP37840 140 aa12.4□□□□□ -0.42
TRAF3-208ENST00000560371 KHDC1LQ5JSQ8 128 aa12.4□□□□□ -0.42
TRAF3-208ENST00000560371 UBE2NLQ5JXB2 153 aa12.4□□□□□ -0.42
TRAF3-208ENST00000560371 SFRP5Q5T4F7 317 aa12.4□□□□□ -0.42
TRAF3-208ENST00000560371 OR2G6Q5TZ20 316 aa12.4□□□□□ -0.42
TRAF3-208ENST00000560371 LIPHQ8WWY8 451 aa12.4□□□□□ -0.42
TRAF3-208ENST00000560371 ZPBPQ9BS86 351 aa12.4□□□□□ -0.42
TRAF3-208ENST00000560371 C20orf27Q9GZN8 174 aa12.4□□□□□ -0.42
TRAF3-208ENST00000560371 SERTAD4Q9NUC0 356 aa12.4□□□□□ -0.42
TRAF3-208ENST00000560371 TMEM221A6NGB7 291 aa12.4□□□□□ -0.43
TRAF3-208ENST00000560371 GABRPO00591 440 aa12.4□□□□□ -0.43
TRAF3-208ENST00000560371 STK17BO94768 372 aa12.4□□□□□ -0.43
TRAF3-208ENST00000560371 HYAL1Q12794 435 aa12.4□□□□□ -0.43
TRAF3-208ENST00000560371 ILKQ13418 452 aa12.4□□□□□ -0.43
TRAF3-208ENST00000560371 PDLIM3Q53GG5 364 aaPredicted RBP12.4□□□□□ -0.43
TRAF3-208ENST00000560371 TRMT12Q53H54 448 aaKnown RBP12.4□□□□□ -0.43
TRAF3-208ENST00000560371 TBPL2Q6SJ96 375 aa12.4□□□□□ -0.43
TRAF3-208ENST00000560371 METAP1DQ6UB28 335 aaPredicted RBP12.4□□□□□ -0.43
TRAF3-208ENST00000560371 MFRPQ9BY79 579 aa12.4□□□□□ -0.43
TRAF3-208ENST00000560371 PDFQ9HBH1 243 aa12.4□□□□□ -0.43
TRAF3-208ENST00000560371 ENPP5Q9UJA9 477 aa12.4□□□□□ -0.43
TRAF3-208ENST00000560371 COL22A1Q8NFW1 1626 aaPredicted RBP12.39□□□□□ -0.43
TRAF3-208ENST00000560371 ACOD1A6NK06 481 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 OR6C76A6NM76 312 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 F5H5P2 479 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 GFYI3L273 518 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 SULT1B1O43704 296 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 PTTG1O95997 202 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 CATR1Q13166 79 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 SLC14A1Q13336 389 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 GDF7Q7Z4P5 450 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 MAML2Q8IZL2 1156 aaPredicted RBP12.39□□□□□ -0.43
TRAF3-208ENST00000560371 BHLHE23Q8NDY6 225 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 ABHD11Q8NFV4 315 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 MED18Q9BUE0 208 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 NKX6-3A6NJ46 265 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 GPR137BO60478 399 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 CAPZBP47756 277 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 GAB1Q13480 694 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 B3GLCTQ6Y288 498 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms