RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 TNFSF9P41273 254 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 OR1D4P47884 311 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 NPBWR2P48146 333 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 TFPI2P48307 235 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 ARRB1P49407 418 aaPredicted RBP2.79□□□□□ -1.96
SPG11-218ENST00000559754 PRELPP51888 382 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 ERVK-25P63136 954 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 TNNC1P63316 161 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 TLE4Q04727 773 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 GPR176Q14439 515 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 NCF4Q15080 339 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 C17orf58Q2M2W7 97 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 OR52E8Q6IFG1 317 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 SPESP1Q6UW49 350 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 C6orf89Q6UWU4 347 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 PGAP1Q75T13 922 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 COPS6Q7L5N1 327 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 SNX20Q7Z614 316 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 APOBEC3FQ8IUX4 373 aaKnown RBP2.79□□□□□ -1.96
SPG11-218ENST00000559754 CD302Q8IX05 232 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 CSNK1A1LQ8N752 337 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 LRRC75AQ8NAA5 344 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 FBXO36Q8NEA4 188 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 FBXL13Q8NEE6 735 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 OR4A15Q8NGL6 344 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 ANGPTL6Q8NI99 470 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 AGAP11Q8TF27 550 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 SSC4DQ8WTU2 575 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 PYROXD1Q8WU10 500 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 PDCD6IPQ8WUM4 868 aaKnown RBP2.79□□□□□ -1.96
SPG11-218ENST00000559754 PIH1D2Q8WWB5 315 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 ARL5BQ96KC2 179 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 MCHR1Q99705 422 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 SLC29A1Q99808 456 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 SH3GL1Q99961 368 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 ACBD6Q9BR61 282 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 FAIM2Q9BWQ8 316 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 TM2D1Q9BX74 207 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 RAB1BQ9H0U4 201 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 NEUROG2Q9H2A3 272 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 CAB39LQ9H9S4 337 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 NTN4Q9HB63 628 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 PARVGQ9HBI0 331 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 ZC4H2Q9NQZ6 224 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 ZNF302Q9NR11 478 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 THUMPD1Q9NXG2 353 aaKnown RBP2.79□□□□□ -1.96
SPG11-218ENST00000559754 UXTQ9UBK9 157 aaPredicted RBP2.79□□□□□ -1.96
SPG11-218ENST00000559754 SLC17A4Q9Y2C5 497 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 SH3TC1Q8TE82 1336 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 CDHR2Q9BYE9 1310 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 VSTM2BA6NLU5 285 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 FOXI3A8MTJ6 420 aaPredicted RBP2.78□□□□□ -1.96
SPG11-218ENST00000559754 A8MUA0 341 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 FAM220BPB1ANY3 271 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 GOSR2O14653 212 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 ZBTB5O15062 677 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 SIVA1O15304 175 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 EIF4E2O60573 245 aaKnown RBP2.78□□□□□ -1.96
SPG11-218ENST00000559754 ZNF254O75437 659 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 SCRG1O75711 98 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 ERLIN2O94905 339 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 SCELO95171 688 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 HCKP08631 526 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 CT45A10P0DMU9 189 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 PRPS2P11908 318 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 LCN1P31025 176 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 UGT1A3P35503 534 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 ALDH3B2P48448 385 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 KCNJ3P48549 501 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 ARHGDIBP52566 201 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 PSMD4P55036 377 aaKnown RBP2.78□□□□□ -1.96
SPG11-218ENST00000559754 LIM2P55344 173 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 PSMC5P62195 406 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 LCN2P80188 198 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 CHRNB3Q05901 458 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 ANGPT1Q15389 498 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 AANATQ16613 207 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 MICAQ29983 383 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 PGGHGQ32M88 737 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 CNPY1Q3B7I2 92 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 VWA2Q5GFL6 755 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 ARMCX5Q6P1M9 558 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 REG3GQ6UW15 175 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 ASCL4Q6XD76 172 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 ZNF836Q6ZNA1 936 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 GDPD3Q7L5L3 318 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 RBM45Q8IUH3 476 aaKnown RBP2.78□□□□□ -1.96
SPG11-218ENST00000559754 LIX1Q8N485 282 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 FAM86B1Q8N7N1 296 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 KLHL30-AS1Q8NEE0 82 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 OR52E5Q8NH55 327 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 TFB1MQ8WVM0 346 aaKnown RBP2.78□□□□□ -1.96
SPG11-218ENST00000559754 MYDGFQ969H8 173 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 MS4A14Q96JA4 679 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 TBX15Q96SF7 602 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 CCDC28BQ9BUN5 200 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 KRTAP4-3Q9BYR4 195 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 ZYG11BQ9C0D3 744 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 FGF20Q9NP95 211 aaPredicted RBP2.78□□□□□ -1.96
SPG11-218ENST00000559754 SENP1Q9P0U3 644 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms