RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 AKR7A3O95154 331 aa11.39□□□□□ -0.59
USP3-213ENST00000559711 GAAP10253 952 aa11.39□□□□□ -0.59
USP3-213ENST00000559711 CD53P19397 219 aa11.39□□□□□ -0.59
USP3-213ENST00000559711 CNR1P21554 472 aa11.39□□□□□ -0.59
USP3-213ENST00000559711 GALP22466 123 aa11.39□□□□□ -0.59
USP3-213ENST00000559711 TCEA1P23193 301 aaKnown RBP11.39□□□□□ -0.59
USP3-213ENST00000559711 SHC1P29353 583 aa11.39□□□□□ -0.59
USP3-213ENST00000559711 SRD5A2P31213 254 aa11.39□□□□□ -0.59
USP3-213ENST00000559711 FGF9P31371 208 aaPredicted RBP11.39□□□□□ -0.59
USP3-213ENST00000559711 CD96P40200 585 aa11.39□□□□□ -0.59
USP3-213ENST00000559711 DNASE1L1P49184 302 aa11.39□□□□□ -0.59
USP3-213ENST00000559711 CENPAP49450 140 aa11.39□□□□□ -0.59
USP3-213ENST00000559711 DAP3P51398 398 aaKnown RBP11.39□□□□□ -0.59
USP3-213ENST00000559711 OR12D2P58182 307 aa11.39□□□□□ -0.59
USP3-213ENST00000559711 TAS2R43P59537 309 aa11.39□□□□□ -0.59
USP3-213ENST00000559711 RAP1BP61224 184 aa11.39□□□□□ -0.59
USP3-213ENST00000559711 ACTA2P62736 377 aa11.39□□□□□ -0.59
USP3-213ENST00000559711 RAP1AP62834 184 aa11.39□□□□□ -0.59
USP3-213ENST00000559711 ACTG2P63267 376 aa11.39□□□□□ -0.59
USP3-213ENST00000559711 HSF1Q00613 529 aa11.39□□□□□ -0.59
USP3-213ENST00000559711 C19orf57Q0VDD7 668 aa11.39□□□□□ -0.59
USP3-213ENST00000559711 TMEM176BQ3YBM2 270 aaPredicted RBP11.39□□□□□ -0.59
USP3-213ENST00000559711 CDONQ4KMG0 1287 aa11.39□□□□□ -0.59
USP3-213ENST00000559711 ABHD17BQ5VST6 288 aa11.39□□□□□ -0.59
USP3-213ENST00000559711 FAM205BPQ63HN1 556 aa11.39□□□□□ -0.59
USP3-213ENST00000559711 TMPPEQ6ZT21 453 aa11.39□□□□□ -0.59
USP3-213ENST00000559711 SLC16A9Q7RTY1 509 aa11.39□□□□□ -0.59
USP3-213ENST00000559711 TMPRSS7Q7RTY8 843 aa11.39□□□□□ -0.59
USP3-213ENST00000559711 KDM8Q8N371 416 aa11.39□□□□□ -0.59
USP3-213ENST00000559711 ZFP41Q8N8Y5 198 aa11.39□□□□□ -0.59
USP3-213ENST00000559711 ZNF511Q8NB15 262 aa11.39□□□□□ -0.59
USP3-213ENST00000559711 ASB10Q8WXI3 467 aa11.39□□□□□ -0.59
USP3-213ENST00000559711 TMEM203Q969S6 136 aa11.39□□□□□ -0.59
USP3-213ENST00000559711 KIAA1143Q96AT1 154 aaPredicted RBP11.39□□□□□ -0.59
USP3-213ENST00000559711 MIB2Q96AX9 1013 aa11.39□□□□□ -0.59
USP3-213ENST00000559711 MRPL48Q96GC5 212 aaKnown RBP11.39□□□□□ -0.59
USP3-213ENST00000559711 C4orf36Q96KX1 117 aa11.39□□□□□ -0.59
USP3-213ENST00000559711 JSRP1Q96MG2 331 aaPredicted RBP11.39□□□□□ -0.59
USP3-213ENST00000559711 OR5B2Q96R09 309 aa11.39□□□□□ -0.59
USP3-213ENST00000559711 NUAK2Q9H093 628 aa11.39□□□□□ -0.59
USP3-213ENST00000559711 TMEM185BQ9H7F4 350 aa11.39□□□□□ -0.59
USP3-213ENST00000559711 TXNL4BQ9NX01 149 aaKnown RBP11.39□□□□□ -0.59
USP3-213ENST00000559711 DKKL1Q9UK85 242 aa11.39□□□□□ -0.59
USP3-213ENST00000559711 B9D1Q9UPM9 204 aa11.39□□□□□ -0.59
USP3-213ENST00000559711 RPH3AQ9Y2J0 694 aaPredicted RBP11.39□□□□□ -0.59
USP3-213ENST00000559711 MRPS18CQ9Y3D5 142 aaKnown RBP11.39□□□□□ -0.59
USP3-213ENST00000559711 SIRT4Q9Y6E7 314 aaPredicted RBP11.39□□□□□ -0.59
USP3-213ENST00000559711 MPDZO75970 2070 aa11.38□□□□□ -0.59
USP3-213ENST00000559711 A0A0G2JMM0 328 aa11.38□□□□□ -0.59
USP3-213ENST00000559711 PNMA8CA0A1B0GUJ8 204 aa11.38□□□□□ -0.59
USP3-213ENST00000559711 LOC102725191A0A1B0GVB3 256 aa11.38□□□□□ -0.59
USP3-213ENST00000559711 A0A1W2PNR3 127 aa11.38□□□□□ -0.59
USP3-213ENST00000559711 A0A1W2PPB8 328 aa11.38□□□□□ -0.59
USP3-213ENST00000559711 A0A1W2PRS3 328 aa11.38□□□□□ -0.59
USP3-213ENST00000559711 OR2M5A3KFT3 312 aa11.38□□□□□ -0.59
USP3-213ENST00000559711 METTL15A6NJ78 407 aa11.38□□□□□ -0.59
USP3-213ENST00000559711 KIR3DP1A8MWS1 328 aa11.38□□□□□ -0.59
USP3-213ENST00000559711 J3QLW9 94 aa11.38□□□□□ -0.59
USP3-213ENST00000559711 PLPP2O43688 288 aa11.38□□□□□ -0.59
USP3-213ENST00000559711 HLA-DPB1P04440 258 aa11.38□□□□□ -0.59
USP3-213ENST00000559711 IFNGR1P15260 489 aa11.38□□□□□ -0.59
USP3-213ENST00000559711 ZNF19P17023 458 aa11.38□□□□□ -0.59
USP3-213ENST00000559711 OR2B6P58173 313 aa11.38□□□□□ -0.59
USP3-213ENST00000559711 RUNX1T1Q06455 604 aa11.38□□□□□ -0.59
USP3-213ENST00000559711 TGIF1Q15583 401 aa11.38□□□□□ -0.59
USP3-213ENST00000559711 CRTC2Q53ET0 693 aaPredicted RBP11.38□□□□□ -0.59
USP3-213ENST00000559711 LYPD4Q6UWN0 246 aa11.38□□□□□ -0.59
USP3-213ENST00000559711 SLC35D2Q76EJ3 337 aa11.38□□□□□ -0.59
USP3-213ENST00000559711 RFLNBQ8N5W9 214 aa11.38□□□□□ -0.59
USP3-213ENST00000559711 THAP4Q8WY91 577 aa11.38□□□□□ -0.59
USP3-213ENST00000559711 C5orf34Q96MH7 638 aa11.38□□□□□ -0.59
USP3-213ENST00000559711 MNTQ99583 582 aa11.38□□□□□ -0.59
USP3-213ENST00000559711 TM9SF2Q99805 663 aa11.38□□□□□ -0.59
USP3-213ENST00000559711 CDADC1Q9BWV3 514 aa11.38□□□□□ -0.59
USP3-213ENST00000559711 MMP27Q9H306 513 aa11.38□□□□□ -0.59
USP3-213ENST00000559711 DEPPQ9NTK1 212 aa11.38□□□□□ -0.59
USP3-213ENST00000559711 LRFN1Q9P244 771 aa11.38□□□□□ -0.59
USP3-213ENST00000559711 B3GAT1Q9P2W7 334 aa11.38□□□□□ -0.59
USP3-213ENST00000559711 COPS3Q9UNS2 423 aa11.38□□□□□ -0.59
USP3-213ENST00000559711 RIF1Q5UIP0 2472 aaKnown RBP11.38□□□□□ -0.59
USP3-213ENST00000559711 IGLV1-36A0A0B4J1U3 117 aa11.37□□□□□ -0.59
USP3-213ENST00000559711 LRRC3CA6NJW4 275 aa11.37□□□□□ -0.59
USP3-213ENST00000559711 E9PI62 339 aa11.37□□□□□ -0.59
USP3-213ENST00000559711 NPIPA5E9PKD4 350 aa11.37□□□□□ -0.59
USP3-213ENST00000559711 LRRTM2O43300 516 aa11.37□□□□□ -0.59
USP3-213ENST00000559711 SEC14L5O43304 696 aa11.37□□□□□ -0.59
USP3-213ENST00000559711 NEURL1O76050 574 aa11.37□□□□□ -0.59
USP3-213ENST00000559711 PMS2P2O95744 297 aa11.37□□□□□ -0.59
USP3-213ENST00000559711 OPN1LWP04000 364 aa11.37□□□□□ -0.59
USP3-213ENST00000559711 ITGA3P26006 1051 aa11.37□□□□□ -0.59
USP3-213ENST00000559711 SFTPDP35247 375 aa11.37□□□□□ -0.59
USP3-213ENST00000559711 ENTPD1P49961 510 aa11.37□□□□□ -0.59
USP3-213ENST00000559711 BMXP51813 675 aa11.37□□□□□ -0.59
USP3-213ENST00000559711 BLVRAP53004 296 aa11.37□□□□□ -0.59
USP3-213ENST00000559711 RAC1P63000 192 aa11.37□□□□□ -0.59
USP3-213ENST00000559711 SLC35A1P78382 337 aa11.37□□□□□ -0.59
USP3-213ENST00000559711 FABP5Q01469 135 aa11.37□□□□□ -0.59
USP3-213ENST00000559711 OC90Q02509 493 aaPredicted RBP11.37□□□□□ -0.59
USP3-213ENST00000559711 MELKQ14680 651 aa11.37□□□□□ -0.59
USP3-213ENST00000559711 ZNF404Q494X3 552 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms