RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 CD300LDQ6UXZ3 194 aa19.13■□□□□ 0.65
SNX1-206ENST00000559389 RASSF6Q6ZTQ3 369 aa19.13■□□□□ 0.65
SNX1-206ENST00000559389 FAM122BQ7Z309 247 aa19.13■□□□□ 0.65
SNX1-206ENST00000559389 KIF18BQ86Y91 864 aa19.13■□□□□ 0.65
SNX1-206ENST00000559389 C20orf196Q8IYI0 205 aa19.13■□□□□ 0.65
SNX1-206ENST00000559389 UBE2J2Q8N2K1 259 aa19.13■□□□□ 0.65
SNX1-206ENST00000559389 CLDN22Q8N7P3 220 aa19.13■□□□□ 0.65
SNX1-206ENST00000559389 ACBD4Q8NC06 268 aa19.13■□□□□ 0.65
SNX1-206ENST00000559389 STMN2Q93045 179 aa19.13■□□□□ 0.65
SNX1-206ENST00000559389 CENPNQ96H22 339 aaPredicted RBP19.13■□□□□ 0.65
SNX1-206ENST00000559389 ENKD1Q9H0I2 346 aa19.13■□□□□ 0.65
SNX1-206ENST00000559389 ASB6Q9NWX5 421 aa19.13■□□□□ 0.65
SNX1-206ENST00000559389 MAGED1Q9Y5V3 778 aaPredicted RBP19.13■□□□□ 0.65
SNX1-206ENST00000559389 ZNF726A6NNF4 738 aa19.12■□□□□ 0.65
SNX1-206ENST00000559389 PDLIM1O00151 329 aa19.12■□□□□ 0.65
SNX1-206ENST00000559389 PSMB1P20618 241 aaKnown RBP19.12■□□□□ 0.65
SNX1-206ENST00000559389 IGHV1-2P23083 117 aa19.12■□□□□ 0.65
SNX1-206ENST00000559389 FAM27E3Q08E93 113 aa19.12■□□□□ 0.65
SNX1-206ENST00000559389 FAPQ12884 760 aa19.12■□□□□ 0.65
SNX1-206ENST00000559389 CAMK2DQ13557 499 aa19.12■□□□□ 0.65
SNX1-206ENST00000559389 CARD17Q5XLA6 110 aa19.12■□□□□ 0.65
SNX1-206ENST00000559389 FAM205BPQ63HN1 556 aa19.12■□□□□ 0.65
SNX1-206ENST00000559389 RPL13AP3Q6NVV1 102 aa19.12■□□□□ 0.65
SNX1-206ENST00000559389 STAC2Q6ZMT1 411 aa19.12■□□□□ 0.65
SNX1-206ENST00000559389 CXorf67Q86X51 503 aaPredicted RBP19.12■□□□□ 0.65
SNX1-206ENST00000559389 HIPK1Q86Z02 1210 aa19.12■□□□□ 0.65
SNX1-206ENST00000559389 NOXO1Q8NFA2 376 aa19.12■□□□□ 0.65
SNX1-206ENST00000559389 ZNF519Q8TB69 540 aa19.12■□□□□ 0.65
SNX1-206ENST00000559389 SLC25A44Q96H78 314 aaPredicted RBP19.12■□□□□ 0.65
SNX1-206ENST00000559389 TSPAN32Q96QS1 320 aa19.12■□□□□ 0.65
SNX1-206ENST00000559389 GABARAPL1Q9H0R8 117 aa19.12■□□□□ 0.65
SNX1-206ENST00000559389 SEMA6AQ9H2E6 1030 aa19.12■□□□□ 0.65
SNX1-206ENST00000559389 NRIP3Q9NQ35 241 aa19.12■□□□□ 0.65
SNX1-206ENST00000559389 STX18Q9P2W9 335 aaKnown RBP19.12■□□□□ 0.65
SNX1-206ENST00000559389 UPB1Q9UBR1 384 aa19.12■□□□□ 0.65
SNX1-206ENST00000559389 IL20RAQ9UHF4 553 aa19.12■□□□□ 0.65
SNX1-206ENST00000559389 ADAM18Q9Y3Q7 739 aa19.12■□□□□ 0.65
SNX1-206ENST00000559389 FREM1Q5H8C1 2179 aa19.11■□□□□ 0.65
SNX1-206ENST00000559389 PGA4P0DJD7 388 aa19.11■□□□□ 0.65
SNX1-206ENST00000559389 PGA3P0DJD8 388 aa19.11■□□□□ 0.65
SNX1-206ENST00000559389 ANXA8P13928 327 aa19.11■□□□□ 0.65
SNX1-206ENST00000559389 ZNF23P17027 643 aa19.11■□□□□ 0.65
SNX1-206ENST00000559389 PRKACGP22612 351 aa19.11■□□□□ 0.65
SNX1-206ENST00000559389 SLC6A6P31641 620 aa19.11■□□□□ 0.65
SNX1-206ENST00000559389 UGT2B10P36537 528 aa19.11■□□□□ 0.65
SNX1-206ENST00000559389 RPL27P61353 136 aaKnown RBP19.11■□□□□ 0.65
SNX1-206ENST00000559389 ERVK-25P63136 954 aa19.11■□□□□ 0.65
SNX1-206ENST00000559389 RUNX1T1Q06455 604 aa19.11■□□□□ 0.65
SNX1-206ENST00000559389 RFX4Q33E94 735 aa19.11■□□□□ 0.65
SNX1-206ENST00000559389 FAHD1Q6P587 224 aa19.11■□□□□ 0.65
SNX1-206ENST00000559389 DPY19L2P2Q6ZN68 376 aa19.11■□□□□ 0.65
SNX1-206ENST00000559389 LINGO2Q7L985 606 aa19.11■□□□□ 0.65
SNX1-206ENST00000559389 ABHD12BQ7Z5M8 362 aaPredicted RBP19.11■□□□□ 0.65
SNX1-206ENST00000559389 SVOPLQ8N434 492 aa19.11■□□□□ 0.65
SNX1-206ENST00000559389 ZNF566Q969W8 418 aa19.11■□□□□ 0.65
SNX1-206ENST00000559389 LRR1Q96L50 414 aa19.11■□□□□ 0.65
SNX1-206ENST00000559389 EGLN3Q9H6Z9 239 aa19.11■□□□□ 0.65
SNX1-206ENST00000559389 TAS2R16Q9NYV7 291 aa19.11■□□□□ 0.65
SNX1-206ENST00000559389 ZNF346Q9UL40 294 aaKnown RBP19.11■□□□□ 0.65
SNX1-206ENST00000559389 CENPBD1B2RD01 187 aa19.1■□□□□ 0.65
SNX1-206ENST00000559389 ZNF587BE7ETH6 402 aa19.1■□□□□ 0.65
SNX1-206ENST00000559389 G3V2T6 193 aa19.1■□□□□ 0.65
SNX1-206ENST00000559389 SOX14O95416 240 aa19.1■□□□□ 0.65
SNX1-206ENST00000559389 IGHG1P01857 330 aa19.1■□□□□ 0.65
SNX1-206ENST00000559389 TP53P04637 393 aaPredicted RBP19.1■□□□□ 0.65
SNX1-206ENST00000559389 ITGA5P08648 1049 aa19.1■□□□□ 0.65
SNX1-206ENST00000559389 APEHP13798 732 aaKnown RBP19.1■□□□□ 0.65
SNX1-206ENST00000559389 CSNK1A1P48729 337 aa19.1■□□□□ 0.65
SNX1-206ENST00000559389 FOXG1P55316 489 aaPredicted RBP19.1■□□□□ 0.65
SNX1-206ENST00000559389 COX10Q12887 443 aa19.1■□□□□ 0.65
SNX1-206ENST00000559389 ITGADQ13349 1161 aa19.1■□□□□ 0.65
SNX1-206ENST00000559389 PHYHD1Q5SRE7 291 aa19.1■□□□□ 0.65
SNX1-206ENST00000559389 SFRP5Q5T4F7 317 aa19.1■□□□□ 0.65
SNX1-206ENST00000559389 KLHL17Q6TDP4 642 aa19.1■□□□□ 0.65
SNX1-206ENST00000559389 ZDHHC13Q8IUH4 622 aa19.1■□□□□ 0.65
SNX1-206ENST00000559389 PQLC1Q8N2U9 271 aa19.1■□□□□ 0.65
SNX1-206ENST00000559389 GPR137CQ8N3F9 429 aa19.1■□□□□ 0.65
SNX1-206ENST00000559389 OR8D4Q8NGM9 314 aa19.1■□□□□ 0.65
SNX1-206ENST00000559389 DNAJC9Q8WXX5 260 aa19.1■□□□□ 0.65
SNX1-206ENST00000559389 TMEM54Q969K7 222 aa19.1■□□□□ 0.65
SNX1-206ENST00000559389 SAMD8Q96LT4 415 aa19.1■□□□□ 0.65
SNX1-206ENST00000559389 ZNF570Q96NI8 536 aa19.1■□□□□ 0.65
SNX1-206ENST00000559389 MRPL13Q9BYD1 178 aaKnown RBP19.1■□□□□ 0.65
SNX1-206ENST00000559389 PLA2G12AQ9BZM1 189 aa19.1■□□□□ 0.65
SNX1-206ENST00000559389 IL20Q9NYY1 176 aa19.1■□□□□ 0.65
SNX1-206ENST00000559389 REV1Q9UBZ9 1251 aa19.1■□□□□ 0.65
SNX1-206ENST00000559389 PLEKHB1Q9UF11 243 aaPredicted RBP19.1■□□□□ 0.65
SNX1-206ENST00000559389 OAZ3Q9UMX2 235 aa19.1■□□□□ 0.65
SNX1-206ENST00000559389 GPR52Q9Y2T5 361 aa19.1■□□□□ 0.65
SNX1-206ENST00000559389 LRRK2Q5S007 2527 aa19.09■□□□□ 0.65
SNX1-206ENST00000559389 A6NIZ1 184 aa19.09■□□□□ 0.65
SNX1-206ENST00000559389 C16orf97H3BN30 126 aa19.09■□□□□ 0.65
SNX1-206ENST00000559389 RPL36A-HNRNPH2H7BZ11 118 aa19.09■□□□□ 0.65
SNX1-206ENST00000559389 TRMUO75648 421 aaKnown RBP19.09■□□□□ 0.65
SNX1-206ENST00000559389 LYZL6O75951 148 aa19.09■□□□□ 0.65
SNX1-206ENST00000559389 KRT33AO76009 404 aa19.09■□□□□ 0.65
SNX1-206ENST00000559389 PPP1R3DO95685 299 aa19.09■□□□□ 0.65
SNX1-206ENST00000559389 ACADSP16219 412 aa19.09■□□□□ 0.65
SNX1-206ENST00000559389 MPGP29372 298 aa19.09■□□□□ 0.65
SNX1-206ENST00000559389 SDHAP31040 664 aa19.09■□□□□ 0.65
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