RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 CD79BP40259 229 aa9.59□□□□□ -0.87
TPM1-217ENST00000559108 DAPP51397 102 aa9.59□□□□□ -0.87
TPM1-217ENST00000559108 CTXN1P60606 82 aa9.59□□□□□ -0.87
TPM1-217ENST00000559108 LCN6P62502 163 aa9.59□□□□□ -0.87
TPM1-217ENST00000559108 FMODQ06828 376 aa9.59□□□□□ -0.87
TPM1-217ENST00000559108 FAPQ12884 760 aa9.59□□□□□ -0.87
TPM1-217ENST00000559108 TSPAN31Q12999 210 aa9.59□□□□□ -0.87
TPM1-217ENST00000559108 C1DQ13901 141 aaKnown RBP9.59□□□□□ -0.87
TPM1-217ENST00000559108 MESTQ5EB52 335 aa9.59□□□□□ -0.87
TPM1-217ENST00000559108 FBXW9Q5XUX1 488 aa9.59□□□□□ -0.87
TPM1-217ENST00000559108 FAHD1Q6P587 224 aa9.59□□□□□ -0.87
TPM1-217ENST00000559108 SHQ1Q6PI26 577 aaKnown RBP9.59□□□□□ -0.87
TPM1-217ENST00000559108 LRFN4Q6PJG9 635 aa9.59□□□□□ -0.87
TPM1-217ENST00000559108 Q6ZT83 130 aa9.59□□□□□ -0.87
TPM1-217ENST00000559108 C20orf196Q8IYI0 205 aa9.59□□□□□ -0.87
TPM1-217ENST00000559108 ZNF100Q8IYN0 542 aa9.59□□□□□ -0.87
TPM1-217ENST00000559108 ZNF433Q8N7K0 673 aaPredicted RBP9.59□□□□□ -0.87
TPM1-217ENST00000559108 ANKK1Q8NFD2 765 aa9.59□□□□□ -0.87
TPM1-217ENST00000559108 OR4Q3Q8NH05 313 aa9.59□□□□□ -0.87
TPM1-217ENST00000559108 LINC01560Q8TB33 94 aa9.59□□□□□ -0.87
TPM1-217ENST00000559108 GNPDA2Q8TDQ7 276 aa9.59□□□□□ -0.87
TPM1-217ENST00000559108 GIPC3Q8TF64 312 aa9.59□□□□□ -0.87
TPM1-217ENST00000559108 POP5Q969H6 163 aaKnown RBP9.59□□□□□ -0.87
TPM1-217ENST00000559108 TMEM54Q969K7 222 aa9.59□□□□□ -0.87
TPM1-217ENST00000559108 RASD2Q96D21 266 aa9.59□□□□□ -0.87
TPM1-217ENST00000559108 RAB3IPQ96QF0 476 aaPredicted RBP9.59□□□□□ -0.87
TPM1-217ENST00000559108 GPX7Q96SL4 187 aaPredicted RBP9.59□□□□□ -0.87
TPM1-217ENST00000559108 TACO1Q9BSH4 297 aaKnown RBP9.59□□□□□ -0.87
TPM1-217ENST00000559108 DGCR6LQ9BY27 220 aa9.59□□□□□ -0.87
TPM1-217ENST00000559108 MRPL13Q9BYD1 178 aaKnown RBP9.59□□□□□ -0.87
TPM1-217ENST00000559108 SLCO5A1Q9H2Y9 848 aa9.59□□□□□ -0.87
TPM1-217ENST00000559108 SMURF2Q9HAU4 748 aa9.59□□□□□ -0.87
TPM1-217ENST00000559108 NRIP3Q9NQ35 241 aa9.59□□□□□ -0.87
TPM1-217ENST00000559108 ZNF346Q9UL40 294 aaKnown RBP9.59□□□□□ -0.87
TPM1-217ENST00000559108 PKDREJQ9NTG1 2253 aa9.58□□□□□ -0.88
TPM1-217ENST00000559108 FBN2P35556 2912 aa9.58□□□□□ -0.88
TPM1-217ENST00000559108 HTR3EA5X5Y0 456 aa9.58□□□□□ -0.88
TPM1-217ENST00000559108 ZNF503-AS2A6NEH8 195 aa9.58□□□□□ -0.88
TPM1-217ENST00000559108 ARRDC5A6NEK1 342 aa9.58□□□□□ -0.88
TPM1-217ENST00000559108 SAC3D1A6NKF1 404 aa9.58□□□□□ -0.88
TPM1-217ENST00000559108 HNRNPRO43390 633 aaKnown RBP9.58□□□□□ -0.88
TPM1-217ENST00000559108 DEAF1O75398 565 aaPredicted RBP9.58□□□□□ -0.88
TPM1-217ENST00000559108 TRMUO75648 421 aaKnown RBP9.58□□□□□ -0.88
TPM1-217ENST00000559108 NDUFB2O95178 105 aa9.58□□□□□ -0.88
TPM1-217ENST00000559108 OR6A2O95222 327 aa9.58□□□□□ -0.88
TPM1-217ENST00000559108 HIST1H2ABP04908 130 aa9.58□□□□□ -0.88
TPM1-217ENST00000559108 FASP25445 335 aa9.58□□□□□ -0.88
TPM1-217ENST00000559108 EPHA2P29317 976 aa9.58□□□□□ -0.88
TPM1-217ENST00000559108 MYBPC1Q00872 1141 aa9.58□□□□□ -0.88
TPM1-217ENST00000559108 HIST3H3Q16695 136 aa9.58□□□□□ -0.88
TPM1-217ENST00000559108 RFX4Q33E94 735 aa9.58□□□□□ -0.88
TPM1-217ENST00000559108 CLEC12AQ5QGZ9 265 aa9.58□□□□□ -0.88
TPM1-217ENST00000559108 OTPQ5XKR4 325 aa9.58□□□□□ -0.88
TPM1-217ENST00000559108 ZNF787Q6DD87 383 aa9.58□□□□□ -0.88
TPM1-217ENST00000559108 PTCHD4Q6ZW05 846 aa9.58□□□□□ -0.88
TPM1-217ENST00000559108 HIST3H2AQ7L7L0 130 aa9.58□□□□□ -0.88
TPM1-217ENST00000559108 RRM2BQ7LG56 351 aa9.58□□□□□ -0.88
TPM1-217ENST00000559108 IQCF1Q8N6M8 205 aa9.58□□□□□ -0.88
TPM1-217ENST00000559108 OR6X1Q8NH79 312 aa9.58□□□□□ -0.88
TPM1-217ENST00000559108 FANK1Q8TC84 345 aa9.58□□□□□ -0.88
TPM1-217ENST00000559108 HIST1H2ACQ93077 130 aa9.58□□□□□ -0.88
TPM1-217ENST00000559108 KCNK17Q96T54 332 aa9.58□□□□□ -0.88
TPM1-217ENST00000559108 GABARAPL1Q9H0R8 117 aa9.58□□□□□ -0.88
TPM1-217ENST00000559108 TXNIPQ9H3M7 391 aa9.58□□□□□ -0.88
TPM1-217ENST00000559108 GPR35Q9HC97 309 aa9.58□□□□□ -0.88
TPM1-217ENST00000559108 TMEFF2Q9UIK5 374 aaPredicted RBP9.58□□□□□ -0.88
TPM1-217ENST00000559108 OAZ3Q9UMX2 235 aa9.58□□□□□ -0.88
TPM1-217ENST00000559108 UGT2A1Q9Y4X1 527 aa9.58□□□□□ -0.88
TPM1-217ENST00000559108 ANKHD1Q8IWZ3 2542 aaKnown RBP9.58□□□□□ -0.88
TPM1-217ENST00000559108 A0A1W2PR80 420 aa9.57□□□□□ -0.88
TPM1-217ENST00000559108 NPIPB13A6NJU9 1138 aa9.57□□□□□ -0.88
TPM1-217ENST00000559108 NPIPB4C9JG80 1138 aa9.57□□□□□ -0.88
TPM1-217ENST00000559108 M0R3G1 203 aa9.57□□□□□ -0.88
TPM1-217ENST00000559108 DCTN6O00399 190 aa9.57□□□□□ -0.88
TPM1-217ENST00000559108 BHLHE40O14503 412 aa9.57□□□□□ -0.88
TPM1-217ENST00000559108 GNGT2O14610 69 aa9.57□□□□□ -0.88
TPM1-217ENST00000559108 SLC43A1O75387 559 aa9.57□□□□□ -0.88
TPM1-217ENST00000559108 E2F6O75461 281 aa9.57□□□□□ -0.88
TPM1-217ENST00000559108 RAD51DO75771 328 aa9.57□□□□□ -0.88
TPM1-217ENST00000559108 SLC2A10O95528 541 aa9.57□□□□□ -0.88
TPM1-217ENST00000559108 CD14P08571 375 aa9.57□□□□□ -0.88
TPM1-217ENST00000559108 PSMB1P20618 241 aaKnown RBP9.57□□□□□ -0.88
TPM1-217ENST00000559108 RPL27P61353 136 aaKnown RBP9.57□□□□□ -0.88
TPM1-217ENST00000559108 ELF3P78545 371 aaPredicted RBP9.57□□□□□ -0.88
TPM1-217ENST00000559108 PPP2R2BQ00005 443 aa9.57□□□□□ -0.88
TPM1-217ENST00000559108 ROR2Q01974 943 aaKnown RBP9.57□□□□□ -0.88
TPM1-217ENST00000559108 GABRA6Q16445 453 aa9.57□□□□□ -0.88
TPM1-217ENST00000559108 CEACAM16Q2WEN9 425 aa9.57□□□□□ -0.88
TPM1-217ENST00000559108 SLC36A3Q495N2 470 aa9.57□□□□□ -0.88
TPM1-217ENST00000559108 ZNF362Q5T0B9 420 aaPredicted RBP9.57□□□□□ -0.88
TPM1-217ENST00000559108 SFRP5Q5T4F7 317 aa9.57□□□□□ -0.88
TPM1-217ENST00000559108 SMARCD3Q6STE5 483 aa9.57□□□□□ -0.88
TPM1-217ENST00000559108 CD300LDQ6UXZ3 194 aa9.57□□□□□ -0.88
TPM1-217ENST00000559108 MEX3BQ6ZN04 569 aaKnown RBP9.57□□□□□ -0.88
TPM1-217ENST00000559108 RASSF6Q6ZTQ3 369 aa9.57□□□□□ -0.88
TPM1-217ENST00000559108 DMRTC2Q8IXT2 367 aaPredicted RBP9.57□□□□□ -0.88
TPM1-217ENST00000559108 ZNF295-AS1Q8N0V1 137 aa9.57□□□□□ -0.88
TPM1-217ENST00000559108 SYT14Q8NB59 555 aa9.57□□□□□ -0.88
TPM1-217ENST00000559108 NOXO1Q8NFA2 376 aa9.57□□□□□ -0.88
TPM1-217ENST00000559108 OR5K1Q8NHB7 308 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms