RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 MEPEQ9NQ76 525 aaPredicted RBP10.89□□□□□ -0.67
SMAD3-208ENST00000558827 NANSQ9NR45 359 aa10.89□□□□□ -0.67
SMAD3-208ENST00000558827 TAS2R5Q9NYW4 299 aa10.89□□□□□ -0.67
SMAD3-208ENST00000558827 RHCGQ9UBD6 479 aa10.89□□□□□ -0.67
SMAD3-208ENST00000558827 RIMS3Q9UJD0 308 aa10.89□□□□□ -0.67
SMAD3-208ENST00000558827 NOX1Q9Y5S8 564 aa10.89□□□□□ -0.67
SMAD3-208ENST00000558827 IGHV4-30-2A0A087WSY4 118 aa10.88□□□□□ -0.67
SMAD3-208ENST00000558827 LOC102725191A0A1B0GVB3 256 aa10.88□□□□□ -0.67
SMAD3-208ENST00000558827 PIP5K1CO60331 668 aa10.88□□□□□ -0.67
SMAD3-208ENST00000558827 TMCC2O75069 709 aa10.88□□□□□ -0.67
SMAD3-208ENST00000558827 FZD7O75084 574 aa10.88□□□□□ -0.67
SMAD3-208ENST00000558827 CRYAAP02489 173 aa10.88□□□□□ -0.67
SMAD3-208ENST00000558827 F13BP05160 661 aa10.88□□□□□ -0.67
SMAD3-208ENST00000558827 APOBEC3AP31941 199 aaPredicted RBP10.88□□□□□ -0.67
SMAD3-208ENST00000558827 KDELR2P33947 212 aa10.88□□□□□ -0.67
SMAD3-208ENST00000558827 CSNK1A1P48729 337 aa10.88□□□□□ -0.67
SMAD3-208ENST00000558827 MYBPC1Q00872 1141 aa10.88□□□□□ -0.67
SMAD3-208ENST00000558827 NAAAQ02083 359 aa10.88□□□□□ -0.67
SMAD3-208ENST00000558827 HGFACQ04756 655 aa10.88□□□□□ -0.67
SMAD3-208ENST00000558827 LIPEQ05469 1076 aa10.88□□□□□ -0.67
SMAD3-208ENST00000558827 CARTPTQ16568 116 aa10.88□□□□□ -0.67
SMAD3-208ENST00000558827 MST1LQ2TV78 715 aa10.88□□□□□ -0.67
SMAD3-208ENST00000558827 SWT1Q5T5J6 900 aaKnown RBP10.88□□□□□ -0.67
SMAD3-208ENST00000558827 VTCN1Q7Z7D3 282 aa10.88□□□□□ -0.67
SMAD3-208ENST00000558827 ZNF525Q8N782 197 aa10.88□□□□□ -0.67
SMAD3-208ENST00000558827 ANKS4BQ8N8V4 417 aa10.88□□□□□ -0.67
SMAD3-208ENST00000558827 OR6S1Q8NH40 331 aa10.88□□□□□ -0.67
SMAD3-208ENST00000558827 MS4A3Q96HJ5 214 aa10.88□□□□□ -0.67
SMAD3-208ENST00000558827 VRK1Q99986 396 aaPredicted RBP10.88□□□□□ -0.67
SMAD3-208ENST00000558827 CCDC134Q9H6E4 229 aa10.88□□□□□ -0.67
SMAD3-208ENST00000558827 EVA1AQ9H8M9 152 aa10.88□□□□□ -0.67
SMAD3-208ENST00000558827 MED4Q9NPJ6 270 aa10.88□□□□□ -0.67
SMAD3-208ENST00000558827 C20orf141Q9NUB4 165 aa10.88□□□□□ -0.67
SMAD3-208ENST00000558827 BAG5Q9UL15 447 aa10.88□□□□□ -0.67
SMAD3-208ENST00000558827 SNX13Q9Y5W8 968 aa10.88□□□□□ -0.67
SMAD3-208ENST00000558827 ARPC4-TTLL3A0A0A6YYG9 625 aa10.87□□□□□ -0.67
SMAD3-208ENST00000558827 ELOVL7A1L3X0 281 aa10.87□□□□□ -0.67
SMAD3-208ENST00000558827 SH3PXD2BA1X283 911 aa10.87□□□□□ -0.67
SMAD3-208ENST00000558827 ZNF99A8MXY4 864 aaPredicted RBP10.87□□□□□ -0.67
SMAD3-208ENST00000558827 FAM220BPB1ANY3 271 aa10.87□□□□□ -0.67
SMAD3-208ENST00000558827 RPL36A-HNRNPH2H7BZ11 118 aa10.87□□□□□ -0.67
SMAD3-208ENST00000558827 J3KTA2 159 aa10.87□□□□□ -0.67
SMAD3-208ENST00000558827 GSTA4O15217 222 aa10.87□□□□□ -0.67
SMAD3-208ENST00000558827 GPRIN2O60269 458 aa10.87□□□□□ -0.67
SMAD3-208ENST00000558827 ZNF682O95780 498 aa10.87□□□□□ -0.67
SMAD3-208ENST00000558827 MT-ATP6P00846 226 aa10.87□□□□□ -0.67
SMAD3-208ENST00000558827 CBR1P16152 277 aa10.87□□□□□ -0.67
SMAD3-208ENST00000558827 NCK1P16333 377 aa10.87□□□□□ -0.67
SMAD3-208ENST00000558827 THBS4P35443 961 aa10.87□□□□□ -0.67
SMAD3-208ENST00000558827 AQP2P41181 271 aa10.87□□□□□ -0.67
SMAD3-208ENST00000558827 SLC7A2P52569 658 aa10.87□□□□□ -0.67
SMAD3-208ENST00000558827 SH3BGRP55822 239 aaPredicted RBP10.87□□□□□ -0.67
SMAD3-208ENST00000558827 RUNX1T1Q06455 604 aa10.87□□□□□ -0.67
SMAD3-208ENST00000558827 COQ5Q5HYK3 327 aa10.87□□□□□ -0.67
SMAD3-208ENST00000558827 ZNF544Q6NX49 715 aa10.87□□□□□ -0.67
SMAD3-208ENST00000558827 ERICH5Q6P6B1 374 aa10.87□□□□□ -0.67
SMAD3-208ENST00000558827 SLC46A3Q7Z3Q1 461 aa10.87□□□□□ -0.67
SMAD3-208ENST00000558827 NANOGNBQ7Z5D8 188 aa10.87□□□□□ -0.67
SMAD3-208ENST00000558827 PXKQ7Z7A4 578 aa10.87□□□□□ -0.67
SMAD3-208ENST00000558827 SLC15A3Q8IY34 581 aa10.87□□□□□ -0.67
SMAD3-208ENST00000558827 ZCCHC24Q8N2G6 241 aaKnown RBP10.87□□□□□ -0.67
SMAD3-208ENST00000558827 MOSPD2Q8NHP6 518 aa10.87□□□□□ -0.67
SMAD3-208ENST00000558827 FGFBP3Q8TAT2 258 aa10.87□□□□□ -0.67
SMAD3-208ENST00000558827 RHNO1Q9BSD3 238 aa10.87□□□□□ -0.67
SMAD3-208ENST00000558827 OBP2BQ9NPH6 170 aa10.87□□□□□ -0.67
SMAD3-208ENST00000558827 B3GAT2Q9NPZ5 323 aa10.87□□□□□ -0.67
SMAD3-208ENST00000558827 ANK3Q12955 4377 aaKnown RBP10.87□□□□□ -0.67
SMAD3-208ENST00000558827 NME4O00746 187 aa10.86□□□□□ -0.67
SMAD3-208ENST00000558827 NPPAP01160 153 aa10.86□□□□□ -0.67
SMAD3-208ENST00000558827 OR4A8P0C604 315 aa10.86□□□□□ -0.67
SMAD3-208ENST00000558827 SERPINF1P36955 418 aa10.86□□□□□ -0.67
SMAD3-208ENST00000558827 PTDSS1P48651 473 aaKnown RBP10.86□□□□□ -0.67
SMAD3-208ENST00000558827 CHRNB3Q05901 458 aa10.86□□□□□ -0.67
SMAD3-208ENST00000558827 KRTAP1-1Q07627 177 aa10.86□□□□□ -0.67
SMAD3-208ENST00000558827 LAPTM4AQ15012 233 aa10.86□□□□□ -0.67
SMAD3-208ENST00000558827 KRT80Q6KB66 452 aa10.86□□□□□ -0.67
SMAD3-208ENST00000558827 SYT14Q8NB59 555 aa10.86□□□□□ -0.67
SMAD3-208ENST00000558827 RBM15BQ8NDT2 890 aaKnown RBP10.86□□□□□ -0.67
SMAD3-208ENST00000558827 RP9Q8TA86 221 aaKnown RBP10.86□□□□□ -0.67
SMAD3-208ENST00000558827 MAGEE2Q8TD90 523 aaPredicted RBP10.86□□□□□ -0.67
SMAD3-208ENST00000558827 TMEM239Q8WW34 195 aa10.86□□□□□ -0.67
SMAD3-208ENST00000558827 RASSF5Q8WWW0 418 aa10.86□□□□□ -0.67
SMAD3-208ENST00000558827 NANOS1Q8WY41 292 aaKnown RBP10.86□□□□□ -0.67
SMAD3-208ENST00000558827 SGTBQ96EQ0 304 aa10.86□□□□□ -0.67
SMAD3-208ENST00000558827 MPP4Q96JB8 637 aa10.86□□□□□ -0.67
SMAD3-208ENST00000558827 ZNF347Q96SE7 839 aa10.86□□□□□ -0.67
SMAD3-208ENST00000558827 SH3GL3Q99963 347 aa10.86□□□□□ -0.67
SMAD3-208ENST00000558827 BARX1Q9HBU1 254 aaPredicted RBP10.86□□□□□ -0.67
SMAD3-208ENST00000558827 CA10Q9NS85 328 aa10.86□□□□□ -0.67
SMAD3-208ENST00000558827 GLTPQ9NZD2 209 aa10.86□□□□□ -0.67
SMAD3-208ENST00000558827 PMF1-BGLAPU3KQ54 211 aa10.86□□□□□ -0.67
SMAD3-208ENST00000558827 IGHV2OR16-5A0A0B4J2B6 119 aa10.85□□□□□ -0.67
SMAD3-208ENST00000558827 FAM171A2A8MVW0 826 aa10.85□□□□□ -0.67
SMAD3-208ENST00000558827 CXCR6O00574 342 aa10.85□□□□□ -0.67
SMAD3-208ENST00000558827 CCDC22O60826 627 aa10.85□□□□□ -0.67
SMAD3-208ENST00000558827 OR7A10O76100 309 aa10.85□□□□□ -0.67
SMAD3-208ENST00000558827 OR5F1O95221 314 aa10.85□□□□□ -0.67
SMAD3-208ENST00000558827 BCL10O95999 233 aa10.85□□□□□ -0.67
SMAD3-208ENST00000558827 IFNA14P01570 189 aa10.85□□□□□ -0.67
SMAD3-208ENST00000558827 IGLV1-44P01699 117 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms