RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 ARHGDIAP52565 204 aa15.39■□□□□ 0.05
TPM1-214ENST00000558544 FOXG1P55316 489 aaPredicted RBP15.39■□□□□ 0.05
TPM1-214ENST00000558544 TAF11Q15544 211 aa15.39■□□□□ 0.05
TPM1-214ENST00000558544 TSC22D1Q15714 1073 aa15.39■□□□□ 0.05
TPM1-214ENST00000558544 SHQ1Q6PI26 577 aaKnown RBP15.39■□□□□ 0.05
TPM1-214ENST00000558544 SMARCD3Q6STE5 483 aa15.39■□□□□ 0.05
TPM1-214ENST00000558544 ZNF620Q6ZNG0 422 aa15.39■□□□□ 0.05
TPM1-214ENST00000558544 POMGNT2Q8NAT1 580 aa15.39■□□□□ 0.05
TPM1-214ENST00000558544 OR5K1Q8NHB7 308 aa15.39■□□□□ 0.05
TPM1-214ENST00000558544 ADAD1Q96M93 576 aaKnown RBP15.39■□□□□ 0.05
TPM1-214ENST00000558544 TSPAN32Q96QS1 320 aa15.39■□□□□ 0.05
TPM1-214ENST00000558544 FEVQ99581 238 aa15.39■□□□□ 0.05
TPM1-214ENST00000558544 NIPSNAP1Q9BPW8 284 aa15.39■□□□□ 0.05
TPM1-214ENST00000558544 KATNB1Q9BVA0 655 aa15.39■□□□□ 0.05
TPM1-214ENST00000558544 DGCR6LQ9BY27 220 aa15.39■□□□□ 0.05
TPM1-214ENST00000558544 NDEL1Q9GZM8 345 aa15.39■□□□□ 0.05
TPM1-214ENST00000558544 OR52D1Q9H346 318 aa15.39■□□□□ 0.05
TPM1-214ENST00000558544 TXNIPQ9H3M7 391 aa15.39■□□□□ 0.05
TPM1-214ENST00000558544 S100A14Q9HCY8 104 aa15.39■□□□□ 0.05
TPM1-214ENST00000558544 ASB6Q9NWX5 421 aa15.39■□□□□ 0.05
TPM1-214ENST00000558544 PLEKHB1Q9UF11 243 aaPredicted RBP15.39■□□□□ 0.05
TPM1-214ENST00000558544 ZNF346Q9UL40 294 aaKnown RBP15.39■□□□□ 0.05
TPM1-214ENST00000558544 ADAM18Q9Y3Q7 739 aa15.39■□□□□ 0.05
TPM1-214ENST00000558544 NPIPB13A6NJU9 1138 aa15.38■□□□□ 0.05
TPM1-214ENST00000558544 NPIPB4C9JG80 1138 aa15.38■□□□□ 0.05
TPM1-214ENST00000558544 LYZL6O75951 148 aa15.38■□□□□ 0.05
TPM1-214ENST00000558544 IGHMP01871 453 aa15.38■□□□□ 0.05
TPM1-214ENST00000558544 ZNF23P17027 643 aa15.38■□□□□ 0.05
TPM1-214ENST00000558544 PRKACGP22612 351 aa15.38■□□□□ 0.05
TPM1-214ENST00000558544 IGHV1-2P23083 117 aa15.38■□□□□ 0.05
TPM1-214ENST00000558544 UGT2B10P36537 528 aa15.38■□□□□ 0.05
TPM1-214ENST00000558544 ERVK-25P63136 954 aa15.38■□□□□ 0.05
TPM1-214ENST00000558544 RIPK1Q13546 671 aa15.38■□□□□ 0.05
TPM1-214ENST00000558544 PHYHD1Q5SRE7 291 aa15.38■□□□□ 0.05
TPM1-214ENST00000558544 C9orf135Q5VTT2 229 aa15.38■□□□□ 0.05
TPM1-214ENST00000558544 STAC2Q6ZMT1 411 aa15.38■□□□□ 0.05
TPM1-214ENST00000558544 LINGO2Q7L985 606 aa15.38■□□□□ 0.05
TPM1-214ENST00000558544 KIF18BQ86Y91 864 aa15.38■□□□□ 0.05
TPM1-214ENST00000558544 GPR137CQ8N3F9 429 aa15.38■□□□□ 0.05
TPM1-214ENST00000558544 OR6X1Q8NH79 312 aa15.38■□□□□ 0.05
TPM1-214ENST00000558544 SAMD8Q96LT4 415 aa15.38■□□□□ 0.05
TPM1-214ENST00000558544 PKP2Q99959 881 aa15.38■□□□□ 0.05
TPM1-214ENST00000558544 LINC00470Q9BZP3 86 aa15.38■□□□□ 0.05
TPM1-214ENST00000558544 EGLN3Q9H6Z9 239 aa15.38■□□□□ 0.05
TPM1-214ENST00000558544 OR6C65A6NJZ3 312 aa15.37■□□□□ 0.05
TPM1-214ENST00000558544 ZNF587BE7ETH6 402 aa15.37■□□□□ 0.05
TPM1-214ENST00000558544 M0R3G1 203 aa15.37■□□□□ 0.05
TPM1-214ENST00000558544 CD14P08571 375 aa15.37■□□□□ 0.05
TPM1-214ENST00000558544 ITGA5P08648 1049 aa15.37■□□□□ 0.05
TPM1-214ENST00000558544 COX5AP20674 150 aa15.37■□□□□ 0.05
TPM1-214ENST00000558544 GSTM3P21266 225 aa15.37■□□□□ 0.05
TPM1-214ENST00000558544 COL8A1P27658 744 aa15.37■□□□□ 0.05
TPM1-214ENST00000558544 CSNK1A1P48729 337 aa15.37■□□□□ 0.05
TPM1-214ENST00000558544 RPL27P61353 136 aaKnown RBP15.37■□□□□ 0.05
TPM1-214ENST00000558544 SORDQ00796 357 aa15.37■□□□□ 0.05
TPM1-214ENST00000558544 RUNX1T1Q06455 604 aa15.37■□□□□ 0.05
TPM1-214ENST00000558544 ITGADQ13349 1161 aa15.37■□□□□ 0.05
TPM1-214ENST00000558544 RFX4Q33E94 735 aa15.37■□□□□ 0.05
TPM1-214ENST00000558544 ARMC4Q5T2S8 1044 aa15.37■□□□□ 0.05
TPM1-214ENST00000558544 ANKRD34AQ69YU3 496 aa15.37■□□□□ 0.05
TPM1-214ENST00000558544 RASSF6Q6ZTQ3 369 aa15.37■□□□□ 0.05
TPM1-214ENST00000558544 C20orf196Q8IYI0 205 aa15.37■□□□□ 0.05
TPM1-214ENST00000558544 ICA1LQ8NDH6 482 aa15.37■□□□□ 0.05
TPM1-214ENST00000558544 OR6N1Q8NGY5 312 aa15.37■□□□□ 0.05
TPM1-214ENST00000558544 STMN2Q93045 179 aa15.37■□□□□ 0.05
TPM1-214ENST00000558544 ZNF566Q969W8 418 aa15.37■□□□□ 0.05
TPM1-214ENST00000558544 NRBF2Q96F24 287 aa15.37■□□□□ 0.05
TPM1-214ENST00000558544 SLC25A44Q96H78 314 aaPredicted RBP15.37■□□□□ 0.05
TPM1-214ENST00000558544 GPX7Q96SL4 187 aaPredicted RBP15.37■□□□□ 0.05
TPM1-214ENST00000558544 KIF17Q9P2E2 1029 aa15.37■□□□□ 0.05
TPM1-214ENST00000558544 CDH10Q9Y6N8 788 aa15.37■□□□□ 0.05
TPM1-214ENST00000558544 G3V2T6 193 aa15.36■□□□□ 0.05
TPM1-214ENST00000558544 C16orf97H3BN30 126 aa15.36■□□□□ 0.05
TPM1-214ENST00000558544 PDLIM1O00151 329 aa15.36■□□□□ 0.05
TPM1-214ENST00000558544 TRMUO75648 421 aaKnown RBP15.36■□□□□ 0.05
TPM1-214ENST00000558544 SOX14O95416 240 aa15.36■□□□□ 0.05
TPM1-214ENST00000558544 ATP6V1G2O95670 118 aa15.36■□□□□ 0.05
TPM1-214ENST00000558544 PPP1R3DO95685 299 aa15.36■□□□□ 0.05
TPM1-214ENST00000558544 IGHG1P01857 330 aa15.36■□□□□ 0.05
TPM1-214ENST00000558544 IGFBP1P08833 259 aaPredicted RBP15.36■□□□□ 0.05
TPM1-214ENST00000558544 PGA4P0DJD7 388 aa15.36■□□□□ 0.05
TPM1-214ENST00000558544 PGA3P0DJD8 388 aa15.36■□□□□ 0.05
TPM1-214ENST00000558544 IGFBP2P18065 325 aa15.36■□□□□ 0.05
TPM1-214ENST00000558544 PSMB1P20618 241 aaKnown RBP15.36■□□□□ 0.05
TPM1-214ENST00000558544 SLC6A6P31641 620 aa15.36■□□□□ 0.05
TPM1-214ENST00000558544 ACVR1BP36896 505 aa15.36■□□□□ 0.05
TPM1-214ENST00000558544 CLRN1P58418 232 aa15.36■□□□□ 0.05
TPM1-214ENST00000558544 P2RY6Q15077 328 aa15.36■□□□□ 0.05
TPM1-214ENST00000558544 SFRP5Q5T4F7 317 aa15.36■□□□□ 0.05
TPM1-214ENST00000558544 KLHL17Q6TDP4 642 aa15.36■□□□□ 0.05
TPM1-214ENST00000558544 MEX3BQ6ZN04 569 aaKnown RBP15.36■□□□□ 0.05
TPM1-214ENST00000558544 HDDC2Q7Z4H3 204 aa15.36■□□□□ 0.05
TPM1-214ENST00000558544 ABHD12BQ7Z5M8 362 aaPredicted RBP15.36■□□□□ 0.05
TPM1-214ENST00000558544 HIPK1Q86Z02 1210 aa15.36■□□□□ 0.05
TPM1-214ENST00000558544 ZNF433Q8N7K0 673 aaPredicted RBP15.36■□□□□ 0.05
TPM1-214ENST00000558544 ATG16L2Q8NAA4 619 aa15.36■□□□□ 0.05
TPM1-214ENST00000558544 NOXO1Q8NFA2 376 aa15.36■□□□□ 0.05
TPM1-214ENST00000558544 ZNF519Q8TB69 540 aa15.36■□□□□ 0.05
TPM1-214ENST00000558544 KISS1RQ969F8 398 aaPredicted RBP15.36■□□□□ 0.05
TPM1-214ENST00000558544 CENPNQ96H22 339 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms