RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 HLA-HP01893 362 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 ELK1P19419 428 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 NPY4RP50391 375 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 MSMO1Q15800 293 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 ZNF239Q16600 458 aaKnown RBP12.93□□□□□ -0.34
SPG11-210ENST00000558319 PLK5Q496M5 336 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 LILRA2Q8N149 483 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 HLA-CQ95604 372 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 DNMT3BQ9UBC3 853 aaKnown RBP12.93□□□□□ -0.34
SPG11-210ENST00000558319 ALX3O95076 343 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 EDN1P05305 212 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 SCG5P05408 212 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 PSMB3P49720 205 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 RAB35Q15286 201 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 MARCH8Q5T0T0 291 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 ZNF574Q6ZN55 896 aaPredicted RBP12.93□□□□□ -0.34
SPG11-210ENST00000558319 GTF2H5Q6ZYL4 71 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 OR1S2Q8NGQ3 325 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 SLC6A18Q96N87 628 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 ULBP2Q9BZM5 246 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 GAREM1Q9H706 876 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 NPFFR2Q9Y5X5 522 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 ADRB1P08588 477 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 AADACP22760 399 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 IDUAP35475 653 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 C21orf62-AS1Q17RA5 79 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 C1orf220Q5T0J3 134 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 OR8G2PQ6IF36 304 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 ABHD4Q8TB40 342 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 NOSIPQ9Y314 301 aaKnown RBP12.93□□□□□ -0.34
SPG11-210ENST00000558319 SNX11Q9Y5W9 270 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 HS3ST1O14792 307 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 GLYR1Q49A26 553 aaPredicted RBP12.92□□□□□ -0.34
SPG11-210ENST00000558319 SOWAHCQ53LP3 525 aaPredicted RBP12.92□□□□□ -0.34
SPG11-210ENST00000558319 SIRT6Q8N6T7 355 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 DEFB127Q9H1M4 99 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 CXCL16Q9H2A7 254 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 CLEC2DQ9UHP7 191 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 CNMDO75829 334 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 DRD1P21728 446 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 CD38P28907 300 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 SLC16A14Q7RTX9 510 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 UBE2FQ969M7 185 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 CCDC74AQ96AQ1 378 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 LIN7BQ9HAP6 207 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 ARNT2Q9HBZ2 717 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 ZNF724A8MTY0 619 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 LALBAP00709 142 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 ACTBL2Q562R1 376 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 UNC5DQ6UXZ4 953 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 OR5M8Q8NGP6 311 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 OR2G3Q8NGZ4 309 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 CYB5BO43169 146 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 C1SP09871 688 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 CYBAP13498 195 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 PRPH2P23942 346 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 BLVRBP30043 206 aaPredicted RBP12.92□□□□□ -0.34
SPG11-210ENST00000558319 PDE7AQ13946 482 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 ACKR1Q16570 336 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 LRRC26Q2I0M4 334 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 MPEG1Q2M385 716 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 ADPRMQ3LIE5 342 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 CTSL3PQ5NE16 218 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 GLCCI1Q86VQ1 547 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 MKXQ8IYA7 352 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 CPXM2Q8N436 756 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 CDRT4Q8N9R6 151 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 OR52I1Q8NGK6 324 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 INSM2Q96T92 566 aaPredicted RBP12.92□□□□□ -0.34
SPG11-210ENST00000558319 EXOSC3Q9NQT5 275 aaKnown RBP12.92□□□□□ -0.34
SPG11-210ENST00000558319 SPHK1Q9NYA1 384 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 SERTM2A0A1B0GWG4 89 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 ANKUB1A6NFN9 424 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 MAKP20794 623 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 HTR2CP28335 458 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 IAH1Q2TAA2 248 aaPredicted RBP12.92□□□□□ -0.34
SPG11-210ENST00000558319 OR13F1Q8NGS4 319 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 OR4A16Q8NH70 328 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 MUCL1Q96DR8 90 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 NRIP3Q9NQ35 241 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 PSORS1C1Q9UIG5 152 aa12.92□□□□□ -0.34
SPG11-210ENST00000558319 BIDP55957 195 aa12.91□□□□□ -0.34
SPG11-210ENST00000558319 FLI1Q01543 452 aaPredicted RBP12.91□□□□□ -0.34
SPG11-210ENST00000558319 RING1Q06587 406 aa12.91□□□□□ -0.34
SPG11-210ENST00000558319 Q6ZNX1 250 aa12.91□□□□□ -0.34
SPG11-210ENST00000558319 KHSRPQ92945 711 aaKnown RBP eCLIP12.91□□□□□ -0.342e-6■■■□□ 17.9
SPG11-210ENST00000558319 CLMPQ9H6B4 373 aa12.91□□□□□ -0.34
SPG11-210ENST00000558319 NRG2O14511 850 aaPredicted RBP12.91□□□□□ -0.34
SPG11-210ENST00000558319 HBQ1P09105 142 aa12.91□□□□□ -0.34
SPG11-210ENST00000558319 MTCP1P56278 107 aa12.91□□□□□ -0.34
SPG11-210ENST00000558319 CYS1Q717R9 158 aa12.91□□□□□ -0.34
SPG11-210ENST00000558319 UBAC2Q8NBM4 344 aa12.91□□□□□ -0.34
SPG11-210ENST00000558319 TSSK2Q96PF2 358 aa12.91□□□□□ -0.34
SPG11-210ENST00000558319 DCLRE1CQ96SD1 692 aaKnown RBP12.91□□□□□ -0.34
SPG11-210ENST00000558319 METTL9Q9H1A3 318 aa12.91□□□□□ -0.34
SPG11-210ENST00000558319 NXT1Q9UKK6 140 aaKnown RBP12.91□□□□□ -0.34
SPG11-210ENST00000558319 SLC6A14Q9UN76 642 aa12.91□□□□□ -0.34
SPG11-210ENST00000558319 DDOSTP39656 456 aa12.91□□□□□ -0.34
SPG11-210ENST00000558319 AKR1C3P42330 323 aa12.91□□□□□ -0.34
SPG11-210ENST00000558319 HBA1P69905 142 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms