RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 PRELID1Q9Y255 219 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 ADAM18Q9Y3Q7 739 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 TMEM184BQ9Y519 407 aaPredicted RBP7.55□□□□□ -1.2
SPG11-209ENST00000558253 MAU2Q9Y6X3 613 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 V9GY05 133 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 TMEM131Q92545 1883 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 SCN3AQ9NY46 2000 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 TRBV5-5A0A0J9YX44 114 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 TEX51A0A1B0GUA7 166 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 LINC00854A0A1B0GVQ3 168 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 A0A1W2PPC1 479 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 SMIM30A4D0T7 59 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 IFITM5A6NNB3 132 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 GNB5O14775 395 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 TFECO14948 347 aaPredicted RBP7.54□□□□□ -1.2
SPG11-209ENST00000558253 SSX4O60224 188 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 PRAF2O60831 178 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 ICOSLGO75144 302 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 NPIPB7O75200 414 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 ZNF254O75437 659 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 MTRF1O75570 445 aaKnown RBP7.54□□□□□ -1.2
SPG11-209ENST00000558253 AHSA1O95433 338 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 EIF4EP06730 217 aaKnown RBP7.54□□□□□ -1.2
SPG11-209ENST00000558253 PRKCAP17252 672 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 ALOX5APP20292 161 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 PTNP21246 168 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 ITPKBP27987 946 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 CRABP1P29762 137 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 NAA10P41227 235 aaPredicted RBP7.54□□□□□ -1.2
SPG11-209ENST00000558253 APOBEC1P41238 236 aaKnown RBP7.54□□□□□ -1.2
SPG11-209ENST00000558253 OR1D4P47884 311 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 CXCL12P48061 93 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 CSNK1EP49674 416 aaKnown RBP7.54□□□□□ -1.2
SPG11-209ENST00000558253 NR0B1P51843 470 aaKnown RBP7.54□□□□□ -1.2
SPG11-209ENST00000558253 PSMA6P60900 246 aaKnown RBP7.54□□□□□ -1.2
SPG11-209ENST00000558253 RPL27P61353 136 aaKnown RBP7.54□□□□□ -1.2
SPG11-209ENST00000558253 ZNF117Q03924 483 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 EGR4Q05215 589 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 C17orf67Q0P5P2 114 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 TNK1Q13470 666 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 GPR176Q14439 515 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 INSL4Q14641 139 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 TOMM20Q15388 145 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 NNATQ16517 81 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 NTRK2Q16620 822 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 NDUFAF6Q330K2 333 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 HDDC2Q7Z4H3 204 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 SLC7A5P1Q8MH63 180 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 GHDCQ8N2G8 530 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 YIPF7Q8N8F6 280 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 GPR148Q8TDV2 347 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 UBASH3BQ8TF42 649 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 SMIM4Q8WVI0 70 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 CAPSLQ8WWF8 208 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 METTL21AQ8WXB1 218 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 ZNF501Q96CX3 271 aaPredicted RBP7.54□□□□□ -1.2
SPG11-209ENST00000558253 RASD2Q96D21 266 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 OMA1Q96E52 524 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 HYLS1Q96M11 299 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 Q96M85 177 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 DERL3Q96Q80 235 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 OR2M2Q96R28 347 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 GTPBP2Q9BX10 602 aaKnown RBP7.54□□□□□ -1.2
SPG11-209ENST00000558253 SEMA4CQ9C0C4 833 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 TXNIPQ9H3M7 391 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 SLC17A5Q9NRA2 495 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 SDHAF3Q9NRP4 125 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 FGF21Q9NSA1 209 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 TAS2R8Q9NYW2 309 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 VSX1Q9NZR4 365 aaPredicted RBP7.54□□□□□ -1.2
SPG11-209ENST00000558253 NLKQ9UBE8 527 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 PISDQ9UG56 409 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 SUSD2Q9UGT4 822 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 ING4Q9UNL4 249 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 ALG5Q9Y673 324 aa7.54□□□□□ -1.2
SPG11-209ENST00000558253 TRBV5-7A0A0A0MS05 114 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 TMED7-TICAM2A0A0A6YYA0 188 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 C7orf66A4D0T2 115 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 PRSS37A4D1T9 235 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 MEGF11A6BM72 1044 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 TRABD2BA6NFA1 517 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 ANKUB1A6NFN9 424 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 B8ZZF3 427 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 GABARAPH6UMI1 98 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 GPR171O14626 319 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 ZNF208O43345 1280 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 SELENOFO60613 162 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 UPK3AO75631 287 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 ZFPL1O95159 310 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 CRYZL1O95825 349 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 FOLR1P15328 257 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 ARSBP15848 533 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 ATF1P18846 271 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 TCEA1P23193 301 aaKnown RBP7.53□□□□□ -1.2
SPG11-209ENST00000558253 MAOBP27338 520 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 ABCD3P28288 659 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 EVI2BP34910 448 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 DAP3P51398 398 aaKnown RBP7.53□□□□□ -1.2
SPG11-209ENST00000558253 ART1P52961 327 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 ROM1Q03395 351 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms