RNA–Protein interactions for RNA: ENST00000557933.5

LDLR-205, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LDLR, Length 2,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-205ENST00000557933 TMEM265A0A087WTH1 108 aa11.24□□□□□ -0.61
LDLR-205ENST00000557933 H0YGG7 62 aa11.24□□□□□ -0.61
LDLR-205ENST00000557933 OR2T7P0C7T2 308 aa11.24□□□□□ -0.61
LDLR-205ENST00000557933 GABRA1P14867 456 aa11.24□□□□□ -0.61
LDLR-205ENST00000557933 PPP3CBP16298 524 aa11.24□□□□□ -0.61
LDLR-205ENST00000557933 ZNF28P17035 718 aa11.24□□□□□ -0.61
LDLR-205ENST00000557933 TPMTP51580 245 aa11.24□□□□□ -0.61
LDLR-205ENST00000557933 ADPRHP54922 357 aa11.24□□□□□ -0.61
LDLR-205ENST00000557933 ARF3P61204 181 aaPredicted RBP11.24□□□□□ -0.61
LDLR-205ENST00000557933 SMAD2Q15796 467 aaKnown RBP11.24□□□□□ -0.61
LDLR-205ENST00000557933 RPL22L1Q6P5R6 122 aaKnown RBP11.24□□□□□ -0.61
LDLR-205ENST00000557933 CBLN3Q6UW01 205 aa11.24□□□□□ -0.61
LDLR-205ENST00000557933 UNQ6126/PRO20091Q6UXV3 157 aa11.24□□□□□ -0.61
LDLR-205ENST00000557933 CD163Q86VB7 1156 aa11.24□□□□□ -0.61
LDLR-205ENST00000557933 OR10K1Q8NGX5 313 aa11.24□□□□□ -0.61
LDLR-205ENST00000557933 OR2T27Q8NH04 317 aa11.24□□□□□ -0.61
LDLR-205ENST00000557933 LRRC46Q96FV0 321 aa11.24□□□□□ -0.61
LDLR-205ENST00000557933 TINAGL1Q9GZM7 467 aaPredicted RBP11.24□□□□□ -0.61
LDLR-205ENST00000557933 ZNF768Q9H5H4 540 aaKnown RBP11.24□□□□□ -0.61
LDLR-205ENST00000557933 CGGBP1Q9UFW8 167 aaPredicted RBP11.24□□□□□ -0.61
LDLR-205ENST00000557933 ZNF281Q9Y2X9 895 aa11.24□□□□□ -0.61
LDLR-205ENST00000557933 STON1Q9Y6Q2 735 aa11.24□□□□□ -0.61
LDLR-205ENST00000557933 TICRRQ7Z2Z1 1910 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 UBE2QL1A1L167 161 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 OR2M5A3KFT3 312 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 CDC14CA4D256 554 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 FITM1A5D6W6 292 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 GPR31O00270 319 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 OIP5O43482 229 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 ALOX12BO75342 701 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 NDUFB2O95178 105 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 KAT7O95251 611 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 GALP22466 123 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 MST1P26927 711 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 ACTC1P68032 377 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 ACTA1P68133 377 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 PSG6Q00889 435 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 TAF13Q15543 124 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 SLC22A6Q4U2R8 563 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 TANGO2Q6ICL3 276 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 PRR22Q8IZ63 422 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 BVESQ8NE79 360 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 OR2AK2Q8NG84 335 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 OR5AK2Q8NH90 309 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 TSEN15Q8WW01 171 aaKnown RBP11.23□□□□□ -0.61
LDLR-205ENST00000557933 OR1E3Q8WZA6 343 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 GAL3ST3Q96A11 431 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 OR2A5Q96R48 311 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 TEX101Q9BY14 249 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 PBX4Q9BYU1 374 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 PRO3102Q9H379 93 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 DNAJB12Q9NXW2 375 aaKnown RBP11.23□□□□□ -0.61
LDLR-205ENST00000557933 TAS2R5Q9NYW4 299 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 TAS2R3Q9NYW6 316 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 MRM2Q9UI43 246 aaKnown RBP11.23□□□□□ -0.61
LDLR-205ENST00000557933 C19orf53Q9UNZ5 99 aaPredicted RBP11.23□□□□□ -0.61
LDLR-205ENST00000557933 PLEKHA6Q9Y2H5 1048 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 DCDC2BA2VCK2 349 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 ELOA3DA6NLF2 546 aaPredicted RBP11.23□□□□□ -0.61
LDLR-205ENST00000557933 F5H5P2 479 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 RBBP9O75884 186 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 NDUFB6O95139 128 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 GK2Q14410 553 aaPredicted RBP11.23□□□□□ -0.61
LDLR-205ENST00000557933 OR7A5Q15622 319 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 MEP1BQ16820 701 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 ELOA3BQ3SY89 546 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 FAM69AQ5T7M9 428 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 RHOUQ7L0Q8 258 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 ELOA3Q8NG57 546 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 C3orf49Q96BT1 292 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 RPP25Q9BUL9 199 aaKnown RBP11.23□□□□□ -0.61
LDLR-205ENST00000557933 JAM3Q9BX67 310 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 POFUT1Q9H488 388 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 IFT46Q9NQC8 304 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 PRR13Q9NZ81 148 aa11.23□□□□□ -0.61
LDLR-205ENST00000557933 A0A1W2PPC1 479 aa11.22□□□□□ -0.61
LDLR-205ENST00000557933 BRINP1O60477 761 aa11.22□□□□□ -0.61
LDLR-205ENST00000557933 ITGA5P08648 1049 aa11.22□□□□□ -0.61
LDLR-205ENST00000557933 GIPP09681 153 aaPredicted RBP11.22□□□□□ -0.61
LDLR-205ENST00000557933 GAAP10253 952 aa11.22□□□□□ -0.61
LDLR-205ENST00000557933 POU3F4P49335 361 aa11.22□□□□□ -0.61
LDLR-205ENST00000557933 BTG2P78543 158 aa11.22□□□□□ -0.61
LDLR-205ENST00000557933 PRAMEF8Q5VWM4 474 aa11.22□□□□□ -0.61
LDLR-205ENST00000557933 C1QL3Q5VWW1 255 aa11.22□□□□□ -0.61
LDLR-205ENST00000557933 PRAMEF7Q5VXH5 474 aa11.22□□□□□ -0.61
LDLR-205ENST00000557933 PDZD9Q8IXQ8 264 aa11.22□□□□□ -0.61
LDLR-205ENST00000557933 CMIPQ8IY22 773 aa11.22□□□□□ -0.61
LDLR-205ENST00000557933 DND1Q8IYX4 353 aaKnown RBP11.22□□□□□ -0.61
LDLR-205ENST00000557933 KDM8Q8N371 416 aa11.22□□□□□ -0.61
LDLR-205ENST00000557933 CASTOR1Q8WTX7 329 aa11.22□□□□□ -0.61
LDLR-205ENST00000557933 FAM46BQ96A09 425 aa11.22□□□□□ -0.61
LDLR-205ENST00000557933 RNF166Q96A37 237 aaPredicted RBP11.22□□□□□ -0.61
LDLR-205ENST00000557933 MARVELD3Q96A59 401 aa11.22□□□□□ -0.61
LDLR-205ENST00000557933 MRPS24Q96EL2 167 aaKnown RBP11.22□□□□□ -0.61
LDLR-205ENST00000557933 SLC38A3Q99624 504 aa11.22□□□□□ -0.61
LDLR-205ENST00000557933 KXD1Q9BQD3 176 aa11.22□□□□□ -0.61
LDLR-205ENST00000557933 SLC17A9Q9BYT1 436 aa11.22□□□□□ -0.61
LDLR-205ENST00000557933 SYT4Q9H2B2 425 aa11.22□□□□□ -0.61
LDLR-205ENST00000557933 RXFP3Q9NSD7 469 aa11.22□□□□□ -0.61
LDLR-205ENST00000557933 ZNF337Q9Y3M9 751 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms