RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 COMMD4Q9H0A8 199 aa10.77□□□□□ -0.69
VIPAS39-211ENST00000557658 EXO5Q9H790 373 aa10.77□□□□□ -0.69
VIPAS39-211ENST00000557658 DPP7Q9UHL4 492 aa10.77□□□□□ -0.69
VIPAS39-211ENST00000557658 SPTBP11277 2137 aa10.77□□□□□ -0.69
VIPAS39-211ENST00000557658 GRXCR1A8MXD5 290 aa10.76□□□□□ -0.69
VIPAS39-211ENST00000557658 APOC3P02656 99 aa10.76□□□□□ -0.69
VIPAS39-211ENST00000557658 SLC35E2P0CK97 266 aa10.76□□□□□ -0.69
VIPAS39-211ENST00000557658 CCL5P13501 91 aa10.76□□□□□ -0.69
VIPAS39-211ENST00000557658 MPGP29372 298 aa10.76□□□□□ -0.69
VIPAS39-211ENST00000557658 CSF2RBP32927 897 aa10.76□□□□□ -0.69
VIPAS39-211ENST00000557658 ADH7P40394 386 aa10.76□□□□□ -0.69
VIPAS39-211ENST00000557658 CDKN2AP42771 156 aaKnown RBP10.76□□□□□ -0.69
VIPAS39-211ENST00000557658 MNX1P50219 401 aaPredicted RBP10.76□□□□□ -0.69
VIPAS39-211ENST00000557658 SORDQ00796 357 aa10.76□□□□□ -0.69
VIPAS39-211ENST00000557658 ZNF676Q8N7Q3 588 aa10.76□□□□□ -0.69
VIPAS39-211ENST00000557658 PXT1Q8NFP0 134 aa10.76□□□□□ -0.69
VIPAS39-211ENST00000557658 OR4D10Q8NGI6 311 aa10.76□□□□□ -0.69
VIPAS39-211ENST00000557658 OR51S1Q8NGJ8 323 aa10.76□□□□□ -0.69
VIPAS39-211ENST00000557658 OR10G6Q8NH81 332 aa10.76□□□□□ -0.69
VIPAS39-211ENST00000557658 RSC1A1Q92681 617 aa10.76□□□□□ -0.69
VIPAS39-211ENST00000557658 ANKRD9Q96BM1 317 aaPredicted RBP10.76□□□□□ -0.69
VIPAS39-211ENST00000557658 MRPS24Q96EL2 167 aaKnown RBP10.76□□□□□ -0.69
VIPAS39-211ENST00000557658 KLHDC2Q9Y2U9 406 aa10.76□□□□□ -0.69
VIPAS39-211ENST00000557658 LAMA2P24043 3122 aaKnown RBP10.76□□□□□ -0.69
VIPAS39-211ENST00000557658 TRAV8-7A0A075B6U6 113 aa10.76□□□□□ -0.69
VIPAS39-211ENST00000557658 TRBV5-7A0A0A0MS05 114 aa10.76□□□□□ -0.69
VIPAS39-211ENST00000557658 RFPL4AA6NLU0 287 aa10.76□□□□□ -0.69
VIPAS39-211ENST00000557658 RFPL4AL1F8VTS6 287 aa10.76□□□□□ -0.69
VIPAS39-211ENST00000557658 PRAMEF2O60811 474 aa10.76□□□□□ -0.69
VIPAS39-211ENST00000557658 ZNF254O75437 659 aa10.76□□□□□ -0.69
VIPAS39-211ENST00000557658 CTAG2O75638 210 aa10.76□□□□□ -0.69
VIPAS39-211ENST00000557658 CDC123O75794 336 aaPredicted RBP10.76□□□□□ -0.69
VIPAS39-211ENST00000557658 KDM4BO94953 1096 aa10.76□□□□□ -0.69
VIPAS39-211ENST00000557658 UBBP0CG47 229 aa10.76□□□□□ -0.69
VIPAS39-211ENST00000557658 UBCP0CG48 685 aaKnown RBP10.76□□□□□ -0.69
VIPAS39-211ENST00000557658 GRK6P43250 576 aa10.76□□□□□ -0.69
VIPAS39-211ENST00000557658 PSMD4P55036 377 aaKnown RBP10.76□□□□□ -0.69
VIPAS39-211ENST00000557658 RPS27AP62979 156 aaKnown RBP10.76□□□□□ -0.69
VIPAS39-211ENST00000557658 UBA52P62987 128 aaKnown RBP10.76□□□□□ -0.69
VIPAS39-211ENST00000557658 DGAT2L6Q6ZPD8 337 aa10.76□□□□□ -0.69
VIPAS39-211ENST00000557658 CCDC107Q8WV48 283 aa10.76□□□□□ -0.69
VIPAS39-211ENST00000557658 SLC38A3Q99624 504 aa10.76□□□□□ -0.69
VIPAS39-211ENST00000557658 SLC19A3Q9BZV2 496 aa10.76□□□□□ -0.69
VIPAS39-211ENST00000557658 SLC6A15Q9H2J7 730 aa10.76□□□□□ -0.69
VIPAS39-211ENST00000557658 ACTR10Q9NZ32 417 aa10.76□□□□□ -0.69
VIPAS39-211ENST00000557658 IKZF2Q9UKS7 526 aa10.76□□□□□ -0.69
VIPAS39-211ENST00000557658 HEATR5AQ86XA9 2040 aa10.76□□□□□ -0.69
VIPAS39-211ENST00000557658 TMEM272A0A1B0GTI8 110 aa10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 OR4C45A6NMZ5 311 aa10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 ABHD16AO95870 558 aa10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 CSTAP01040 98 aa10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 IGF2P01344 180 aa10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 RLN2P04090 185 aa10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 POU2F2P09086 479 aa10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 CSRP1P21291 193 aaKnown RBP10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 PRSS3P35030 304 aa10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 GJA4P35212 333 aa10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 EIF2B5Q13144 721 aaKnown RBP10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 MELKQ14680 651 aa10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 ETFDHQ16134 617 aa10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 ZNF776Q68DI1 518 aaPredicted RBP10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 LRFN4Q6PJG9 635 aa10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 RD3Q7Z3Z2 195 aa10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 GPR148Q8TDV2 347 aa10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 ZNF296Q8WUU4 475 aaPredicted RBP10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 TMEM106AQ96A25 262 aa10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 TSSK2Q96PF2 358 aa10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 ALX4Q9H161 411 aaPredicted RBP10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 UPB1Q9UBR1 384 aa10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 LAMP5Q9UJQ1 280 aa10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 ZNF346Q9UL40 294 aaKnown RBP10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 SLC6A5Q9Y345 797 aa10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 MPDZO75970 2070 aa10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 TRAV18A0A075B6X5 111 aa10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 TMEM212A6NML5 194 aa10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 BLOC1S5-TXNDC5H3BN57 136 aa10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 SLC31A1O15431 190 aa10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 FCER2P06734 321 aa10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 CD14P08571 375 aa10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 MGMTP16455 207 aa10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 AQP2P41181 271 aa10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 GUCA2AQ02747 115 aa10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 SSBP1Q04837 148 aaKnown RBP10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 ENPP2Q13822 863 aa10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 YOD1Q5VVQ6 348 aaPredicted RBP10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 CDC20BQ86Y33 519 aa10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 C12orf76Q8N812 135 aaPredicted RBP10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 EXD3Q8N9H8 876 aa10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 OR51D1Q8NGF3 324 aa10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 OR2G2Q8NGZ5 317 aa10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 OR8K3Q8NH51 312 aa10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 FAM3CQ92520 227 aa10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 FGF13Q92913 245 aa10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 C3orf49Q96BT1 292 aa10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 G6PC3Q9BUM1 346 aa10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 DNTTIP1Q9H147 329 aa10.75□□□□□ -0.69
VIPAS39-211ENST00000557658 A0A1B0GTH9 108 aa10.74□□□□□ -0.69
VIPAS39-211ENST00000557658 OR6C74A6NCV1 312 aa10.74□□□□□ -0.69
VIPAS39-211ENST00000557658 NPIPB9F8W1W9 429 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms