RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 HDAC3O15379 428 aa12.07□□□□□ -0.48
SLIRP-210ENST00000557431 AKAP8O43823 692 aaKnown RBP12.07□□□□□ -0.48
SLIRP-210ENST00000557431 IL6P05231 212 aa12.07□□□□□ -0.48
SLIRP-210ENST00000557431 MSMBP08118 114 aa12.07□□□□□ -0.48
SLIRP-210ENST00000557431 ZCCHC18P0CG32 403 aa12.07□□□□□ -0.48
SLIRP-210ENST00000557431 FAM157BP0CG42 384 aa12.07□□□□□ -0.48
SLIRP-210ENST00000557431 EGR1P18146 543 aa12.07□□□□□ -0.48
SLIRP-210ENST00000557431 ADRA2CP18825 462 aa12.07□□□□□ -0.48
SLIRP-210ENST00000557431 GLRXP35754 106 aa12.07□□□□□ -0.48
SLIRP-210ENST00000557431 RAB1AP62820 205 aa12.07□□□□□ -0.48
SLIRP-210ENST00000557431 MVKQ03426 396 aa12.07□□□□□ -0.48
SLIRP-210ENST00000557431 LRRC74AQ0VAA2 488 aa12.07□□□□□ -0.48
SLIRP-210ENST00000557431 TRMT5Q32P41 509 aaKnown RBP12.07□□□□□ -0.48
SLIRP-210ENST00000557431 GKAP1Q5VSY0 366 aaPredicted RBP12.07□□□□□ -0.48
SLIRP-210ENST00000557431 HHATQ5VTY9 493 aa12.07□□□□□ -0.48
SLIRP-210ENST00000557431 FAHD2BQ6P2I3 314 aaPredicted RBP12.07□□□□□ -0.48
SLIRP-210ENST00000557431 C6orf89Q6UWU4 347 aa12.07□□□□□ -0.48
SLIRP-210ENST00000557431 ZNF584Q8IVC4 421 aa12.07□□□□□ -0.48
SLIRP-210ENST00000557431 PAQR4Q8N4S7 273 aaPredicted RBP12.07□□□□□ -0.48
SLIRP-210ENST00000557431 GLB1L3Q8NCI6 653 aaPredicted RBP12.07□□□□□ -0.48
SLIRP-210ENST00000557431 ANKK1Q8NFD2 765 aa12.07□□□□□ -0.48
SLIRP-210ENST00000557431 OR6N1Q8NGY5 312 aa12.07□□□□□ -0.48
SLIRP-210ENST00000557431 RDH5Q92781 318 aa12.07□□□□□ -0.48
SLIRP-210ENST00000557431 FAHD2AQ96GK7 314 aa12.07□□□□□ -0.48
SLIRP-210ENST00000557431 ITCHQ96J02 903 aa12.07□□□□□ -0.48
SLIRP-210ENST00000557431 FOXB1Q99853 325 aa12.07□□□□□ -0.48
SLIRP-210ENST00000557431 ULBP2Q9BZM5 246 aa12.07□□□□□ -0.48
SLIRP-210ENST00000557431 RACGAP1Q9H0H5 632 aa12.07□□□□□ -0.48
SLIRP-210ENST00000557431 SPEF1Q9Y4P9 236 aa12.07□□□□□ -0.48
SLIRP-210ENST00000557431 TMEM247A6NEH6 219 aa12.06□□□□□ -0.48
SLIRP-210ENST00000557431 C5orf58C9J3I9 102 aa12.06□□□□□ -0.48
SLIRP-210ENST00000557431 CLIC1O00299 241 aa12.06□□□□□ -0.48
SLIRP-210ENST00000557431 OR2T1O43869 369 aa12.06□□□□□ -0.48
SLIRP-210ENST00000557431 TPST2O60704 377 aa12.06□□□□□ -0.48
SLIRP-210ENST00000557431 RP2O75695 350 aa12.06□□□□□ -0.48
SLIRP-210ENST00000557431 RAB36O95755 333 aa12.06□□□□□ -0.48
SLIRP-210ENST00000557431 IDO1P14902 403 aa12.06□□□□□ -0.48
SLIRP-210ENST00000557431 HOXB9P17482 250 aaPredicted RBP12.06□□□□□ -0.48
SLIRP-210ENST00000557431 ACHEP22303 614 aa12.06□□□□□ -0.48
SLIRP-210ENST00000557431 RBMXP38159 391 aaKnown RBP12.06□□□□□ -0.48
SLIRP-210ENST00000557431 POLR2JP52435 117 aaKnown RBP12.06□□□□□ -0.48
SLIRP-210ENST00000557431 LMO4P61968 165 aa12.06□□□□□ -0.48
SLIRP-210ENST00000557431 GALK2Q01415 458 aa12.06□□□□□ -0.48
SLIRP-210ENST00000557431 FXNQ16595 210 aa12.06□□□□□ -0.48
SLIRP-210ENST00000557431 NHLRC1Q6VVB1 395 aa12.06□□□□□ -0.48
SLIRP-210ENST00000557431 SKA3Q8IX90 412 aa12.06□□□□□ -0.48
SLIRP-210ENST00000557431 MSRB3Q8IXL7 192 aa12.06□□□□□ -0.48
SLIRP-210ENST00000557431 C10orf53Q8N6V4 93 aa12.06□□□□□ -0.48
SLIRP-210ENST00000557431 BBS10Q8TAM1 723 aa12.06□□□□□ -0.48
SLIRP-210ENST00000557431 GTF2H4Q92759 462 aa12.06□□□□□ -0.48
SLIRP-210ENST00000557431 ARMC7Q9H6L4 198 aa12.06□□□□□ -0.48
SLIRP-210ENST00000557431 RMND5AQ9H871 391 aa12.06□□□□□ -0.48
SLIRP-210ENST00000557431 MOV10Q9HCE1 1003 aaKnown RBP12.06□□□□□ -0.48
SLIRP-210ENST00000557431 A4GALTQ9NPC4 353 aa12.06□□□□□ -0.48
SLIRP-210ENST00000557431 SLC25A37Q9NYZ2 338 aa12.06□□□□□ -0.48
SLIRP-210ENST00000557431 SLAMF8Q9P0V8 285 aa12.06□□□□□ -0.48
SLIRP-210ENST00000557431 FBXO9Q9UK97 447 aaPredicted RBP12.06□□□□□ -0.48
SLIRP-210ENST00000557431 GRIP1Q9Y3R0 1128 aa12.06□□□□□ -0.48
SLIRP-210ENST00000557431 SNNO75324 88 aaPredicted RBP12.05□□□□□ -0.48
SLIRP-210ENST00000557431 EPHA1P21709 976 aa12.05□□□□□ -0.48
SLIRP-210ENST00000557431 AHCYP23526 432 aa12.05□□□□□ -0.48
SLIRP-210ENST00000557431 AQP1P29972 269 aa12.05□□□□□ -0.48
SLIRP-210ENST00000557431 GLO1Q04760 184 aa12.05□□□□□ -0.48
SLIRP-210ENST00000557431 PMS2P3Q13401 168 aa12.05□□□□□ -0.48
SLIRP-210ENST00000557431 MELKQ14680 651 aa12.05□□□□□ -0.48
SLIRP-210ENST00000557431 WDR88Q6ZMY6 472 aa12.05□□□□□ -0.48
SLIRP-210ENST00000557431 PEG10Q86TG7 708 aaKnown RBP12.05□□□□□ -0.48
SLIRP-210ENST00000557431 IL17RDQ8NFM7 739 aa12.05□□□□□ -0.48
SLIRP-210ENST00000557431 OR51F2Q8NH61 342 aa12.05□□□□□ -0.48
SLIRP-210ENST00000557431 GCDHQ92947 438 aaPredicted RBP12.05□□□□□ -0.48
SLIRP-210ENST00000557431 SLC41A3Q96GZ6 507 aa12.05□□□□□ -0.48
SLIRP-210ENST00000557431 MAELQ96JY0 434 aaKnown RBP12.05□□□□□ -0.48
SLIRP-210ENST00000557431 MS4A5Q9H3V2 200 aa12.05□□□□□ -0.48
SLIRP-210ENST00000557431 BCL2L10Q9HD36 194 aa12.05□□□□□ -0.48
SLIRP-210ENST00000557431 ZIM2Q9NZV7 527 aa12.05□□□□□ -0.48
SLIRP-210ENST00000557431 TAAR3PQ9P1P4 343 aa12.05□□□□□ -0.48
SLIRP-210ENST00000557431 PCDHB10Q9UN67 800 aa12.05□□□□□ -0.48
SLIRP-210ENST00000557431 CACNG2Q9Y698 323 aa12.05□□□□□ -0.48
SLIRP-210ENST00000557431 TRPC5OSA6NMA1 111 aa12.04□□□□□ -0.48
SLIRP-210ENST00000557431 ZNF726A6NNF4 738 aa12.04□□□□□ -0.48
SLIRP-210ENST00000557431 TFP02787 698 aa12.04□□□□□ -0.48
SLIRP-210ENST00000557431 ARAFP10398 606 aa12.04□□□□□ -0.48
SLIRP-210ENST00000557431 PCMT1P22061 227 aa12.04□□□□□ -0.48
SLIRP-210ENST00000557431 CSNK1A1P48729 337 aa12.04□□□□□ -0.48
SLIRP-210ENST00000557431 EVX1P49640 407 aa12.04□□□□□ -0.48
SLIRP-210ENST00000557431 BIDP55957 195 aa12.04□□□□□ -0.48
SLIRP-210ENST00000557431 RGS8P57771 180 aaPredicted RBP12.04□□□□□ -0.48
SLIRP-210ENST00000557431 NCALDP61601 193 aa12.04□□□□□ -0.48
SLIRP-210ENST00000557431 CCL8P80075 99 aa12.04□□□□□ -0.48
SLIRP-210ENST00000557431 PUDPQ08623 228 aa12.04□□□□□ -0.48
SLIRP-210ENST00000557431 OR1Q1Q15612 314 aa12.04□□□□□ -0.48
SLIRP-210ENST00000557431 NKPD1Q17RQ9 610 aa12.04□□□□□ -0.48
SLIRP-210ENST00000557431 CCDC36Q8IYA8 594 aa12.04□□□□□ -0.48
SLIRP-210ENST00000557431 KIRREL3Q8IZU9 778 aa12.04□□□□□ -0.48
SLIRP-210ENST00000557431 C3orf56Q8N813 242 aa12.04□□□□□ -0.48
SLIRP-210ENST00000557431 LSMEM1Q8N8F7 131 aa12.04□□□□□ -0.48
SLIRP-210ENST00000557431 ICA1LQ8NDH6 482 aa12.04□□□□□ -0.48
SLIRP-210ENST00000557431 ADPRHL1Q8NDY3 354 aa12.04□□□□□ -0.48
SLIRP-210ENST00000557431 ZNF418Q8TF45 676 aaPredicted RBP12.04□□□□□ -0.48
SLIRP-210ENST00000557431 C22orf15Q8WYQ4 148 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms