RNA–Protein interactions for RNA: ENST00000557320.5

PAPOLA-223, Transcript of poly(A) polymerase alpha, human

TSL 1 (best) BASIC

Gene PAPOLA, Length 3,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAPOLA-223	ENST00000557320	OTUB2	Q96DC9	234 aa		13.7	□□□□□ -0.22
PAPOLA-223	ENST00000557320	KIRREL1	Q96J84	757 aa		13.7	□□□□□ -0.22
PAPOLA-223	ENST00000557320	LRFN5	Q96NI6	719 aa		13.7	□□□□□ -0.22
PAPOLA-223	ENST00000557320	TRIB3	Q96RU7	358 aa		13.7	□□□□□ -0.22
PAPOLA-223	ENST00000557320	SLC35A3	Q9Y2D2	325 aa		13.7	□□□□□ -0.22
PAPOLA-223	ENST00000557320		A0A087WUU8	490 aa		13.7	□□□□□ -0.22
PAPOLA-223	ENST00000557320	DCTN6	O00399	190 aa		13.7	□□□□□ -0.22
PAPOLA-223	ENST00000557320	FRS3	O43559	492 aa		13.7	□□□□□ -0.22
PAPOLA-223	ENST00000557320	IGHA1	P01876	353 aa		13.7	□□□□□ -0.22
PAPOLA-223	ENST00000557320	MANF	P55145	182 aa	Known RBP	13.7	□□□□□ -0.22
PAPOLA-223	ENST00000557320	HSPB3	Q12988	150 aa		13.7	□□□□□ -0.22
PAPOLA-223	ENST00000557320	RSPO2	Q6UXX9	243 aa	Predicted RBP	13.7	□□□□□ -0.22
PAPOLA-223	ENST00000557320	TRAPPC5	Q8IUR0	188 aa		13.7	□□□□□ -0.22
PAPOLA-223	ENST00000557320	GLB1L2	Q8IW92	636 aa		13.7	□□□□□ -0.22
PAPOLA-223	ENST00000557320	LINC00471	Q8N535	108 aa		13.7	□□□□□ -0.22
PAPOLA-223	ENST00000557320	EID2	Q8N6I1	236 aa		13.7	□□□□□ -0.22
PAPOLA-223	ENST00000557320	SDR9C7	Q8NEX9	313 aa		13.7	□□□□□ -0.22
PAPOLA-223	ENST00000557320	OR6T1	Q8NGN1	323 aa		13.7	□□□□□ -0.22
PAPOLA-223	ENST00000557320	GPBAR1	Q8TDU6	330 aa		13.7	□□□□□ -0.22
PAPOLA-223	ENST00000557320	CASTOR1	Q8WTX7	329 aa		13.7	□□□□□ -0.22
PAPOLA-223	ENST00000557320	RNF222	A6NCQ9	220 aa		13.7	□□□□□ -0.22
PAPOLA-223	ENST00000557320	ADAM10	O14672	748 aa		13.7	□□□□□ -0.22
PAPOLA-223	ENST00000557320	NPC1	O15118	1278 aa		13.7	□□□□□ -0.22
PAPOLA-223	ENST00000557320	TBX18	O95935	607 aa		13.7	□□□□□ -0.22
PAPOLA-223	ENST00000557320	CAV2	P51636	162 aa		13.7	□□□□□ -0.22
PAPOLA-223	ENST00000557320	C21orf58	P58505	322 aa		13.7	□□□□□ -0.22
PAPOLA-223	ENST00000557320	NKX6-1	P78426	367 aa	Predicted RBP	13.7	□□□□□ -0.22
PAPOLA-223	ENST00000557320	BDH1	Q02338	343 aa		13.7	□□□□□ -0.22
PAPOLA-223	ENST00000557320	GGTA1P	Q4G0N0	100 aa		13.7	□□□□□ -0.22
PAPOLA-223	ENST00000557320	TP53I3	Q53FA7	332 aa		13.7	□□□□□ -0.22
PAPOLA-223	ENST00000557320	HENMT1	Q5T8I9	393 aa	Known RBP	13.7	□□□□□ -0.22
PAPOLA-223	ENST00000557320	CDK20	Q8IZL9	346 aa		13.7	□□□□□ -0.22
PAPOLA-223	ENST00000557320	PIGX	Q8TBF5	258 aa		13.7	□□□□□ -0.22
PAPOLA-223	ENST00000557320	RBM18	Q96H35	190 aa	Known RBP	13.7	□□□□□ -0.22
PAPOLA-223	ENST00000557320	PLEKHA1	Q9HB21	404 aa		13.7	□□□□□ -0.22
PAPOLA-223	ENST00000557320	IL17B	Q9UHF5	180 aa		13.7	□□□□□ -0.22
PAPOLA-223	ENST00000557320	KPTN	Q9Y664	436 aa		13.7	□□□□□ -0.22
PAPOLA-223	ENST00000557320	ABLIM3	O94929	683 aa		13.69	□□□□□ -0.22
PAPOLA-223	ENST00000557320	OR4E1	P0C645	316 aa		13.69	□□□□□ -0.22
PAPOLA-223	ENST00000557320	TYRP1	P17643	537 aa		13.69	□□□□□ -0.22
PAPOLA-223	ENST00000557320	TAS2R43	P59537	309 aa		13.69	□□□□□ -0.22
PAPOLA-223	ENST00000557320	HNRNPK	P61978	463 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
PAPOLA-223	ENST00000557320	ZNF763	Q0D2J5	394 aa		13.69	□□□□□ -0.22
PAPOLA-223	ENST00000557320	ZNF345	Q14585	488 aa		13.69	□□□□□ -0.22
PAPOLA-223	ENST00000557320	LSR	Q86X29	649 aa	Predicted RBP	13.69	□□□□□ -0.22
PAPOLA-223	ENST00000557320	NEIL2	Q969S2	332 aa		13.69	□□□□□ -0.22
PAPOLA-223	ENST00000557320	SPACA1	Q9HBV2	294 aa		13.69	□□□□□ -0.22
PAPOLA-223	ENST00000557320	GDE1	Q9NZC3	331 aa		13.69	□□□□□ -0.22
PAPOLA-223	ENST00000557320	GXYLT2	A0PJZ3	443 aa		13.69	□□□□□ -0.22
PAPOLA-223	ENST00000557320	PLPP2	O43688	288 aa		13.69	□□□□□ -0.22
PAPOLA-223	ENST00000557320	TGFB1	P01137	390 aa		13.69	□□□□□ -0.22
PAPOLA-223	ENST00000557320	THBS1	P07996	1170 aa		13.69	□□□□□ -0.22
PAPOLA-223	ENST00000557320	ITPKB	P27987	946 aa		13.69	□□□□□ -0.22
PAPOLA-223	ENST00000557320	OMP	P47874	163 aa		13.69	□□□□□ -0.22
PAPOLA-223	ENST00000557320	EFNB1	P98172	346 aa		13.69	□□□□□ -0.22
PAPOLA-223	ENST00000557320	ENTPD8	Q5MY95	495 aa		13.69	□□□□□ -0.22
PAPOLA-223	ENST00000557320	SAMD8	Q96LT4	415 aa		13.69	□□□□□ -0.22
PAPOLA-223	ENST00000557320	UPB1	Q9UBR1	384 aa		13.69	□□□□□ -0.22
PAPOLA-223	ENST00000557320	CDHR4	A6H8M9	788 aa		13.68	□□□□□ -0.22
PAPOLA-223	ENST00000557320	SURF4	O15260	269 aa		13.68	□□□□□ -0.22
PAPOLA-223	ENST00000557320	FGF16	O43320	207 aa		13.68	□□□□□ -0.22
PAPOLA-223	ENST00000557320	PPP2R1B	P30154	601 aa		13.68	□□□□□ -0.22
PAPOLA-223	ENST00000557320	PRKAG1	P54619	331 aa		13.68	□□□□□ -0.22
PAPOLA-223	ENST00000557320	TAS2R20	P59543	309 aa		13.68	□□□□□ -0.22
PAPOLA-223	ENST00000557320	CSRP2	Q16527	193 aa		13.68	□□□□□ -0.22
PAPOLA-223	ENST00000557320	TPGS2	Q68CL5	300 aa		13.68	□□□□□ -0.22
PAPOLA-223	ENST00000557320	OR2T33	Q8NG76	320 aa		13.68	□□□□□ -0.22
PAPOLA-223	ENST00000557320	OR14K1	Q8NGZ2	314 aa		13.68	□□□□□ -0.22
PAPOLA-223	ENST00000557320	TEAD3	Q99594	435 aa		13.68	□□□□□ -0.22
PAPOLA-223	ENST00000557320	EXOG	Q9Y2C4	368 aa	Known RBP	13.68	□□□□□ -0.22
PAPOLA-223	ENST00000557320	PATJ	Q8NI35	1801 aa		13.68	□□□□□ -0.22
PAPOLA-223	ENST00000557320	CDH23	Q9H251	3354 aa		13.68	□□□□□ -0.22
PAPOLA-223	ENST00000557320	SMCO3	A2RU48	225 aa		13.68	□□□□□ -0.22
PAPOLA-223	ENST00000557320	ACOD1	A6NK06	481 aa		13.68	□□□□□ -0.22
PAPOLA-223	ENST00000557320	ZNF587B	E7ETH6	402 aa		13.68	□□□□□ -0.22
PAPOLA-223	ENST00000557320	GJA4	P35212	333 aa		13.68	□□□□□ -0.22
PAPOLA-223	ENST00000557320	MAP3K8	P41279	467 aa		13.68	□□□□□ -0.22
PAPOLA-223	ENST00000557320	NFATC2	Q13469	925 aa		13.68	□□□□□ -0.22
PAPOLA-223	ENST00000557320	SYPL1	Q16563	259 aa		13.68	□□□□□ -0.22
PAPOLA-223	ENST00000557320	PGGHG	Q32M88	737 aa		13.68	□□□□□ -0.22
PAPOLA-223	ENST00000557320	ZNF311	Q5JNZ3	666 aa		13.68	□□□□□ -0.22
PAPOLA-223	ENST00000557320	PARP12	Q9H0J9	701 aa	Known RBP	13.68	□□□□□ -0.22
PAPOLA-223	ENST00000557320	FAM212B	Q9NTI7	297 aa	Predicted RBP	13.68	□□□□□ -0.22
PAPOLA-223	ENST00000557320	HCFC2	Q9Y5Z7	792 aa		13.68	□□□□□ -0.22
PAPOLA-223	ENST00000557320	NYNRIN	Q9P2P1	1898 aa	Known RBP	13.68	□□□□□ -0.22
PAPOLA-223	ENST00000557320	DRGX	A6NNA5	263 aa		13.68	□□□□□ -0.22
PAPOLA-223	ENST00000557320	SEC14L6	B5MCN3	397 aa		13.68	□□□□□ -0.22
PAPOLA-223	ENST00000557320	IGLV3-25	P01717	112 aa		13.68	□□□□□ -0.22
PAPOLA-223	ENST00000557320	DCN	P07585	359 aa	Known RBP	13.68	□□□□□ -0.22
PAPOLA-223	ENST00000557320	LTBR	P36941	435 aa		13.68	□□□□□ -0.22
PAPOLA-223	ENST00000557320	SULT1A1	P50225	295 aa		13.68	□□□□□ -0.22
PAPOLA-223	ENST00000557320	MEF2D	Q14814	521 aa		13.68	□□□□□ -0.22
PAPOLA-223	ENST00000557320	CTXN3	Q4LDR2	81 aa		13.68	□□□□□ -0.22
PAPOLA-223	ENST00000557320	EXOSC6	Q5RKV6	272 aa	Known RBP	13.68	□□□□□ -0.22
PAPOLA-223	ENST00000557320	PIP5KL1	Q5T9C9	394 aa		13.68	□□□□□ -0.22
PAPOLA-223	ENST00000557320	HS6ST3	Q8IZP7	471 aa		13.68	□□□□□ -0.22
PAPOLA-223	ENST00000557320	SEMA6D	Q8NFY4	1073 aa		13.68	□□□□□ -0.22
PAPOLA-223	ENST00000557320	OR4K17	Q8NGC6	315 aa		13.68	□□□□□ -0.22
PAPOLA-223	ENST00000557320	C2orf15	Q8WU43	125 aa	Known RBP	13.68	□□□□□ -0.22
PAPOLA-223	ENST00000557320	NUDCD2	Q8WVJ2	157 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms