RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 ZSCAN5BA6NJL1 495 aa10.43□□□□□ -0.74
PSEN1-220ENST00000557037 ZNF43P17038 809 aa10.43□□□□□ -0.74
PSEN1-220ENST00000557037 CXCR1P25024 350 aa10.43□□□□□ -0.74
PSEN1-220ENST00000557037 PKNOX1P55347 436 aa10.43□□□□□ -0.74
PSEN1-220ENST00000557037 CAMK2DQ13557 499 aa10.43□□□□□ -0.74
PSEN1-220ENST00000557037 KIAA0040Q15053 153 aa10.43□□□□□ -0.74
PSEN1-220ENST00000557037 MOGQ16653 247 aa10.43□□□□□ -0.74
PSEN1-220ENST00000557037 TTMPQ5BVD1 217 aa10.43□□□□□ -0.74
PSEN1-220ENST00000557037 GDPGP1Q6ZNW5 385 aa10.43□□□□□ -0.74
PSEN1-220ENST00000557037 C16orf62Q7Z3J2 963 aa10.43□□□□□ -0.74
PSEN1-220ENST00000557037 TRIM46Q7Z4K8 759 aa10.43□□□□□ -0.74
PSEN1-220ENST00000557037 RNF130Q86XS8 419 aa10.43□□□□□ -0.74
PSEN1-220ENST00000557037 DDIASQ8IXT1 998 aa10.43□□□□□ -0.74
PSEN1-220ENST00000557037 CPEB3Q8NE35 698 aaKnown RBP10.43□□□□□ -0.74
PSEN1-220ENST00000557037 SLC30A7Q8NEW0 376 aa10.43□□□□□ -0.74
PSEN1-220ENST00000557037 OR7A2PQ8NGA2 310 aa10.43□□□□□ -0.74
PSEN1-220ENST00000557037 SLC25A36Q96CQ1 311 aa10.43□□□□□ -0.74
PSEN1-220ENST00000557037 OR2M2Q96R28 347 aa10.43□□□□□ -0.74
PSEN1-220ENST00000557037 SSBP3Q9BWW4 388 aaPredicted RBP10.43□□□□□ -0.74
PSEN1-220ENST00000557037 ZNF350Q9GZX5 532 aa10.43□□□□□ -0.74
PSEN1-220ENST00000557037 DPH5Q9H2P9 285 aa10.43□□□□□ -0.74
PSEN1-220ENST00000557037 CDH20Q9HBT6 801 aa10.43□□□□□ -0.74
PSEN1-220ENST00000557037 RRAGDQ9NQL2 400 aaPredicted RBP10.43□□□□□ -0.74
PSEN1-220ENST00000557037 EXOSC3Q9NQT5 275 aaKnown RBP10.43□□□□□ -0.74
PSEN1-220ENST00000557037 TMEM106BQ9NUM4 274 aa10.43□□□□□ -0.74
PSEN1-220ENST00000557037 RYR1P21817 5038 aa10.42□□□□□ -0.74
PSEN1-220ENST00000557037 DNAH7Q8WXX0 4024 aa10.42□□□□□ -0.74
PSEN1-220ENST00000557037 LCE6AA0A183 80 aa10.42□□□□□ -0.74
PSEN1-220ENST00000557037 CEACAM18A8MTB9 384 aa10.42□□□□□ -0.74
PSEN1-220ENST00000557037 TNFRSF13BO14836 293 aaPredicted RBP10.42□□□□□ -0.74
PSEN1-220ENST00000557037 C6orf47O95873 294 aa10.42□□□□□ -0.74
PSEN1-220ENST00000557037 SERPINA5P05154 406 aa10.42□□□□□ -0.74
PSEN1-220ENST00000557037 LAMP1P11279 417 aa10.42□□□□□ -0.74
PSEN1-220ENST00000557037 IGLL1P15814 213 aa10.42□□□□□ -0.74
PSEN1-220ENST00000557037 IER3P46695 156 aa10.42□□□□□ -0.74
PSEN1-220ENST00000557037 BTG1P62324 171 aa10.42□□□□□ -0.74
PSEN1-220ENST00000557037 ETF1P62495 437 aaKnown RBP10.42□□□□□ -0.74
PSEN1-220ENST00000557037 KCNJ10P78508 379 aa10.42□□□□□ -0.74
PSEN1-220ENST00000557037 CDK5R2Q13319 367 aa10.42□□□□□ -0.74
PSEN1-220ENST00000557037 C1DQ13901 141 aaKnown RBP10.42□□□□□ -0.74
PSEN1-220ENST00000557037 MFSD13AQ14CX5 517 aa10.42□□□□□ -0.74
PSEN1-220ENST00000557037 CHI3L2Q15782 390 aa10.42□□□□□ -0.74
PSEN1-220ENST00000557037 ARHGAP11BQ3KRB8 267 aa10.42□□□□□ -0.74
PSEN1-220ENST00000557037 TYW3Q6IPR3 259 aaKnown RBP10.42□□□□□ -0.74
PSEN1-220ENST00000557037 TMEM123Q8N131 208 aa10.42□□□□□ -0.74
PSEN1-220ENST00000557037 CLEC4FQ8N1N0 589 aa10.42□□□□□ -0.74
PSEN1-220ENST00000557037 PIK3C3Q8NEB9 887 aa10.42□□□□□ -0.74
PSEN1-220ENST00000557037 OR4S1Q8NGB4 309 aa10.42□□□□□ -0.74
PSEN1-220ENST00000557037 DACT3Q96B18 629 aaPredicted RBP10.42□□□□□ -0.74
PSEN1-220ENST00000557037 CCT7Q99832 543 aa10.42□□□□□ -0.74
PSEN1-220ENST00000557037 NUDT16L1Q9BRJ7 211 aaKnown RBP10.42□□□□□ -0.74
PSEN1-220ENST00000557037 PCGF1Q9BSM1 259 aa10.42□□□□□ -0.74
PSEN1-220ENST00000557037 MMP28Q9H239 520 aa10.42□□□□□ -0.74
PSEN1-220ENST00000557037 TMEM165Q9HC07 324 aa10.42□□□□□ -0.74
PSEN1-220ENST00000557037 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.42□□□□□ -0.74
PSEN1-220ENST00000557037 LRCH1Q9Y2L9 728 aa10.42□□□□□ -0.74
PSEN1-220ENST00000557037 U3KQK5 164 aa10.42□□□□□ -0.74
PSEN1-220ENST00000557037 KIR2DS1A0A191URI9 304 aa10.41□□□□□ -0.74
PSEN1-220ENST00000557037 PLSCR5A0PG75 271 aa10.41□□□□□ -0.74
PSEN1-220ENST00000557037 CRCPO75575 148 aa10.41□□□□□ -0.74
PSEN1-220ENST00000557037 TSPAN9O75954 239 aa10.41□□□□□ -0.74
PSEN1-220ENST00000557037 UBL3O95164 117 aa10.41□□□□□ -0.74
PSEN1-220ENST00000557037 AK1P00568 194 aa10.41□□□□□ -0.74
PSEN1-220ENST00000557037 IGHV3-13P01766 116 aa10.41□□□□□ -0.74
PSEN1-220ENST00000557037 WNT2P09544 360 aa10.41□□□□□ -0.74
PSEN1-220ENST00000557037 PNMTP11086 282 aa10.41□□□□□ -0.74
PSEN1-220ENST00000557037 MATN1P21941 496 aa10.41□□□□□ -0.74
PSEN1-220ENST00000557037 SOAT1P35610 550 aa10.41□□□□□ -0.74
PSEN1-220ENST00000557037 MAGEA4P43358 317 aa10.41□□□□□ -0.74
PSEN1-220ENST00000557037 MAP2K6P52564 334 aa10.41□□□□□ -0.74
PSEN1-220ENST00000557037 BPIFB3P59826 476 aa10.41□□□□□ -0.74
PSEN1-220ENST00000557037 PMS2P3Q13401 168 aa10.41□□□□□ -0.74
PSEN1-220ENST00000557037 DMRTC1Q5HYR2 192 aa10.41□□□□□ -0.74
PSEN1-220ENST00000557037 TMEM255AQ5JRV8 349 aa10.41□□□□□ -0.74
PSEN1-220ENST00000557037 SPATA46Q5T0L3 261 aa10.41□□□□□ -0.74
PSEN1-220ENST00000557037 CASC10Q5T4H9 136 aa10.41□□□□□ -0.74
PSEN1-220ENST00000557037 C1orf140Q5VVS0 124 aa10.41□□□□□ -0.74
PSEN1-220ENST00000557037 PGBD2Q6P3X8 592 aa10.41□□□□□ -0.74
PSEN1-220ENST00000557037 SKA3Q8IX90 412 aa10.41□□□□□ -0.74
PSEN1-220ENST00000557037 SFXN5Q8TD22 340 aa10.41□□□□□ -0.74
PSEN1-220ENST00000557037 OR5P2Q8WZ92 322 aa10.41□□□□□ -0.74
PSEN1-220ENST00000557037 C1orf109Q9NX04 203 aa10.41□□□□□ -0.74
PSEN1-220ENST00000557037 B3GAT1Q9P2W7 334 aa10.41□□□□□ -0.74
PSEN1-220ENST00000557037 FBXL3Q9UKT7 428 aa10.41□□□□□ -0.74
PSEN1-220ENST00000557037 STK38LQ9Y2H1 464 aa10.41□□□□□ -0.74
PSEN1-220ENST00000557037 WDR45Q9Y484 360 aa10.41□□□□□ -0.74
PSEN1-220ENST00000557037 CCL27Q9Y4X3 112 aa10.41□□□□□ -0.74
PSEN1-220ENST00000557037 LYSTQ99698 3801 aa10.4□□□□□ -0.74
PSEN1-220ENST00000557037 HERC2O95714 4834 aa10.4□□□□□ -0.74
PSEN1-220ENST00000557037 A0A0U1RQK1 487 aa10.4□□□□□ -0.74
PSEN1-220ENST00000557037 A8MVM7 634 aa10.4□□□□□ -0.74
PSEN1-220ENST00000557037 CFLARO15519 480 aa10.4□□□□□ -0.74
PSEN1-220ENST00000557037 MGRN1O60291 552 aa10.4□□□□□ -0.74
PSEN1-220ENST00000557037 TAC1P20366 129 aa10.4□□□□□ -0.74
PSEN1-220ENST00000557037 IMPDH1P20839 514 aa10.4□□□□□ -0.74
PSEN1-220ENST00000557037 UQCRC2P22695 453 aa10.4□□□□□ -0.74
PSEN1-220ENST00000557037 MPV17P39210 176 aa10.4□□□□□ -0.74
PSEN1-220ENST00000557037 MAGEA12P43365 314 aa10.4□□□□□ -0.74
PSEN1-220ENST00000557037 MMP15P51511 669 aa10.4□□□□□ -0.74
PSEN1-220ENST00000557037 UCP2P55851 309 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms