RNA–Protein interactions for RNA: ENST00000556846.1

PCNX1-213, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 506 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-213ENST00000556846 MED29Q9NX70 200 aa6.24□□□□□ -1.41
PCNX1-213ENST00000556846 KLHL14Q9P2G3 628 aa6.24□□□□□ -1.41
PCNX1-213ENST00000556846 FBXO9Q9UK97 447 aaPredicted RBP6.24□□□□□ -1.41
PCNX1-213ENST00000556846 USP22Q9UPT9 525 aa6.24□□□□□ -1.41
PCNX1-213ENST00000556846 SPEF1Q9Y4P9 236 aa6.24□□□□□ -1.41
PCNX1-213ENST00000556846 GMEB1Q9Y692 573 aa6.24□□□□□ -1.41
PCNX1-213ENST00000556846 RAI1Q7Z5J4 1906 aaPredicted RBP6.24□□□□□ -1.41
PCNX1-213ENST00000556846 TRBV5-3A0A0A0MS03 114 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 LOC390937A0A1W2PQ73 354 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 CPSF4LA6NMK7 179 aaKnown RBP6.23□□□□□ -1.41
PCNX1-213ENST00000556846 LRRN3E7EW58 273 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 hCG_2039718K7EN88 272 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 NDUFS8O00217 210 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 KPNA4O00629 521 aaPredicted RBP6.23□□□□□ -1.41
PCNX1-213ENST00000556846 PLPP3O14495 311 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 RNF13O43567 381 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 TPST2O60704 377 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 ZNF432O94892 652 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 CH25HO95992 272 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 HPRP00739 348 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 MT-ATP6P00846 226 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 HLA-HP01893 362 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 BGLAPP02818 100 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 C8BP07358 591 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 CELA3BP08861 270 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 UMPSP11172 480 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 APEHP13798 732 aaKnown RBP6.23□□□□□ -1.41
PCNX1-213ENST00000556846 CD247P20963 164 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 CALCRP30988 508 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 LSP1P33241 339 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 THBS4P35443 961 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 CSNK1A1P48729 337 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 BIDP55957 195 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 VLDLRP98155 873 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 GALK2Q01415 458 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 PUDPQ08623 228 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 DAG1Q14118 895 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 SELPLGQ14242 412 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 ADIPOQQ15848 244 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 DUSP7Q16829 419 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 GSG1Q2KHT4 349 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 TRMT5Q32P41 509 aaKnown RBP6.23□□□□□ -1.41
PCNX1-213ENST00000556846 MMEL1Q495T6 779 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 ENTPD8Q5MY95 495 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 PHYHD1Q5SRE7 291 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 C6orf52Q5T4I8 152 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 INTS11Q5TA45 600 aaKnown RBP6.23□□□□□ -1.41
PCNX1-213ENST00000556846 GKAP1Q5VSY0 366 aaPredicted RBP6.23□□□□□ -1.41
PCNX1-213ENST00000556846 METTL21CQ5VZV1 264 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 KRT80Q6KB66 452 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 ZNF813Q6ZN06 617 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 PXKQ7Z7A4 578 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 PATL1Q86TB9 770 aaKnown RBP6.23□□□□□ -1.41
PCNX1-213ENST00000556846 MDP1Q86V88 176 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 SLC30A8Q8IWU4 369 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 C20orf196Q8IYI0 205 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 TMEM123Q8N131 208 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 DPP10Q8N608 796 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 SCAIQ8N9R8 606 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 ZNF540Q8NDQ6 660 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 ADPRHL1Q8NDY3 354 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 NUP37Q8NFH4 326 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 OR6T1Q8NGN1 323 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 OR5J2Q8NH18 312 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 OR10A6Q8NH74 314 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 TSPEARQ8WU66 669 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 RASSF5Q8WWW0 418 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 SLC41A3Q96GZ6 507 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 LRR1Q96L50 414 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 FOXN4Q96NZ1 517 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 MOGAT1Q96PD6 335 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 SORCS2Q96PQ0 1159 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 ARHGDIGQ99819 225 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 SH3GL1Q99961 368 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 ECSITQ9BQ95 431 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 WFDC6Q9BQY6 131 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 CPPED1Q9BRF8 314 aaPredicted RBP6.23□□□□□ -1.41
PCNX1-213ENST00000556846 SIKE1Q9BRV8 207 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 TMEM43Q9BTV4 400 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 RSPO3Q9BXY4 272 aaPredicted RBP6.23□□□□□ -1.41
PCNX1-213ENST00000556846 SHARPINQ9H0F6 387 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 PLK3Q9H4B4 646 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 SEC61A2Q9H9S3 476 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 MYOZ1Q9NP98 299 aaPredicted RBP6.23□□□□□ -1.41
PCNX1-213ENST00000556846 MRPL39Q9NYK5 338 aaKnown RBP6.23□□□□□ -1.41
PCNX1-213ENST00000556846 CRNNQ9UBG3 495 aaPredicted RBP6.23□□□□□ -1.41
PCNX1-213ENST00000556846 CDC42EP3Q9UKI2 254 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 HEATR5AQ86XA9 2040 aa6.23□□□□□ -1.41
PCNX1-213ENST00000556846 USF3Q68DE3 2245 aa6.22□□□□□ -1.41
PCNX1-213ENST00000556846 ARID1AO14497 2285 aa6.22□□□□□ -1.41
PCNX1-213ENST00000556846 IGHV2OR16-5A0A0B4J2B6 119 aa6.22□□□□□ -1.41
PCNX1-213ENST00000556846 LOC100289279A0A1B0GTE1 492 aa6.22□□□□□ -1.41
PCNX1-213ENST00000556846 TRAPPC13A5PLN9 417 aa6.22□□□□□ -1.41
PCNX1-213ENST00000556846 RNF212BA8MTL3 300 aa6.22□□□□□ -1.41
PCNX1-213ENST00000556846 BLOC1S5-TXNDC5H3BN57 136 aa6.22□□□□□ -1.41
PCNX1-213ENST00000556846 TRAF3IP2O43734 574 aaPredicted RBP6.22□□□□□ -1.41
PCNX1-213ENST00000556846 CHP2O43745 196 aa6.22□□□□□ -1.41
PCNX1-213ENST00000556846 FMO6PO60774 539 aa6.22□□□□□ -1.41
PCNX1-213ENST00000556846 EDF1O60869 148 aaKnown RBP6.22□□□□□ -1.41
PCNX1-213ENST00000556846 ENTPD5O75356 428 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms