RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 C6orf89Q6UWU4 347 aa12.7□□□□□ -0.38
CHD8-211ENST00000556833 MEX3DQ86XN8 651 aaKnown RBP12.7□□□□□ -0.38
CHD8-211ENST00000556833 FGFBP3Q8TAT2 258 aa12.7□□□□□ -0.38
CHD8-211ENST00000556833 ASPNQ9BXN1 380 aa12.7□□□□□ -0.38
CHD8-211ENST00000556833 PLA2G12AQ9BZM1 189 aa12.7□□□□□ -0.38
CHD8-211ENST00000556833 MOV10Q9HCE1 1003 aaKnown RBP12.7□□□□□ -0.38
CHD8-211ENST00000556833 B3GAT2Q9NPZ5 323 aa12.7□□□□□ -0.38
CHD8-211ENST00000556833 SDR39U1Q9NRG7 319 aaPredicted RBP12.7□□□□□ -0.38
CHD8-211ENST00000556833 ZNF275Q9NSD4 429 aaPredicted RBP12.7□□□□□ -0.38
CHD8-211ENST00000556833 SLC25A37Q9NYZ2 338 aa12.7□□□□□ -0.38
CHD8-211ENST00000556833 ZNF224Q9NZL3 707 aa12.7□□□□□ -0.38
CHD8-211ENST00000556833 SELENONQ9NZV5 590 aa12.7□□□□□ -0.38
CHD8-211ENST00000556833 SLAMF8Q9P0V8 285 aa12.7□□□□□ -0.38
CHD8-211ENST00000556833 WNK2Q9Y3S1 2297 aa12.69□□□□□ -0.38
CHD8-211ENST00000556833 B4DSR2 109 aa12.69□□□□□ -0.38
CHD8-211ENST00000556833 OR2T1O43869 369 aa12.69□□□□□ -0.38
CHD8-211ENST00000556833 CDC14BO60729 498 aa12.69□□□□□ -0.38
CHD8-211ENST00000556833 FAM157BP0CG42 384 aa12.69□□□□□ -0.38
CHD8-211ENST00000556833 CCL2P13500 99 aa12.69□□□□□ -0.38
CHD8-211ENST00000556833 TNFAIP8L3Q5GJ75 292 aa12.69□□□□□ -0.38
CHD8-211ENST00000556833 AVPI1Q5T686 147 aa12.69□□□□□ -0.38
CHD8-211ENST00000556833 DEF8Q6ZN54 512 aa12.69□□□□□ -0.38
CHD8-211ENST00000556833 MSRB3Q8IXL7 192 aa12.69□□□□□ -0.38
CHD8-211ENST00000556833 GOLGA6L1Q8N7Z2 621 aa12.69□□□□□ -0.38
CHD8-211ENST00000556833 ICA1LQ8NDH6 482 aa12.69□□□□□ -0.38
CHD8-211ENST00000556833 ANKK1Q8NFD2 765 aa12.69□□□□□ -0.38
CHD8-211ENST00000556833 MAELQ96JY0 434 aaKnown RBP12.69□□□□□ -0.38
CHD8-211ENST00000556833 LRRC37BQ96QE4 947 aa12.69□□□□□ -0.38
CHD8-211ENST00000556833 TSPAN32Q96QS1 320 aa12.69□□□□□ -0.38
CHD8-211ENST00000556833 FOXB1Q99853 325 aa12.69□□□□□ -0.38
CHD8-211ENST00000556833 BCL2L10Q9HD36 194 aa12.69□□□□□ -0.38
CHD8-211ENST00000556833 THUMPD1Q9NXG2 353 aaKnown RBP12.69□□□□□ -0.38
CHD8-211ENST00000556833 ARHGAP32A7KAX9 2087 aa12.68□□□□□ -0.38
CHD8-211ENST00000556833 ZNF726A6NNF4 738 aa12.68□□□□□ -0.38
CHD8-211ENST00000556833 M0R3H8 397 aa12.68□□□□□ -0.38
CHD8-211ENST00000556833 CLPTM1O96005 669 aa12.68□□□□□ -0.38
CHD8-211ENST00000556833 ARAFP10398 606 aa12.68□□□□□ -0.38
CHD8-211ENST00000556833 ZNF35P13682 527 aa12.68□□□□□ -0.38
CHD8-211ENST00000556833 PRKAR1BP31321 381 aa12.68□□□□□ -0.38
CHD8-211ENST00000556833 MAGEB1P43366 347 aa12.68□□□□□ -0.38
CHD8-211ENST00000556833 CSNK1A1P48729 337 aa12.68□□□□□ -0.38
CHD8-211ENST00000556833 BIDP55957 195 aa12.68□□□□□ -0.38
CHD8-211ENST00000556833 ERVS71-1P61550 626 aa12.68□□□□□ -0.38
CHD8-211ENST00000556833 RAB1AP62820 205 aa12.68□□□□□ -0.38
CHD8-211ENST00000556833 CDK6Q00534 326 aa12.68□□□□□ -0.38
CHD8-211ENST00000556833 GLO1Q04760 184 aa12.68□□□□□ -0.38
CHD8-211ENST00000556833 PUDPQ08623 228 aa12.68□□□□□ -0.38
CHD8-211ENST00000556833 MELKQ14680 651 aa12.68□□□□□ -0.38
CHD8-211ENST00000556833 OR1Q1Q15612 314 aa12.68□□□□□ -0.38
CHD8-211ENST00000556833 FAHD2BQ6P2I3 314 aaPredicted RBP12.68□□□□□ -0.38
CHD8-211ENST00000556833 MSANTD1Q6ZTZ1 278 aa12.68□□□□□ -0.38
CHD8-211ENST00000556833 PAQR4Q8N4S7 273 aaPredicted RBP12.68□□□□□ -0.38
CHD8-211ENST00000556833 IL17RDQ8NFM7 739 aa12.68□□□□□ -0.38
CHD8-211ENST00000556833 SEMA6DQ8NFY4 1073 aa12.68□□□□□ -0.38
CHD8-211ENST00000556833 DNAJA4Q8WW22 397 aaPredicted RBP12.68□□□□□ -0.38
CHD8-211ENST00000556833 GTF3AQ92664 365 aaKnown RBP12.68□□□□□ -0.38
CHD8-211ENST00000556833 TMEM186Q96B77 213 aa12.68□□□□□ -0.38
CHD8-211ENST00000556833 SLC47A1Q96FL8 570 aa12.68□□□□□ -0.38
CHD8-211ENST00000556833 FAHD2AQ96GK7 314 aa12.68□□□□□ -0.38
CHD8-211ENST00000556833 ZNF75AQ96N20 296 aa12.68□□□□□ -0.38
CHD8-211ENST00000556833 SH3GL3Q99963 347 aa12.68□□□□□ -0.38
CHD8-211ENST00000556833 IKZF5Q9H5V7 419 aa12.68□□□□□ -0.38
CHD8-211ENST00000556833 FBXO9Q9UK97 447 aaPredicted RBP12.68□□□□□ -0.38
CHD8-211ENST00000556833 SPEF1Q9Y4P9 236 aa12.68□□□□□ -0.38
CHD8-211ENST00000556833 LOC105371242A0A075B767 164 aa12.67□□□□□ -0.38
CHD8-211ENST00000556833 KPNA4O00629 521 aaPredicted RBP12.67□□□□□ -0.38
CHD8-211ENST00000556833 ZNF500O60304 480 aaPredicted RBP12.67□□□□□ -0.38
CHD8-211ENST00000556833 TPST2O60704 377 aa12.67□□□□□ -0.38
CHD8-211ENST00000556833 OPN1SWP03999 348 aa12.67□□□□□ -0.38
CHD8-211ENST00000556833 MSMBP08118 114 aa12.67□□□□□ -0.38
CHD8-211ENST00000556833 ADORA3P0DMS8 318 aa12.67□□□□□ -0.38
CHD8-211ENST00000556833 GAAP10253 952 aa12.67□□□□□ -0.38
CHD8-211ENST00000556833 HOXB9P17482 250 aaPredicted RBP12.67□□□□□ -0.38
CHD8-211ENST00000556833 GLRXP35754 106 aa12.67□□□□□ -0.38
CHD8-211ENST00000556833 CDH12P55289 794 aa12.67□□□□□ -0.38
CHD8-211ENST00000556833 MVKQ03426 396 aa12.67□□□□□ -0.38
CHD8-211ENST00000556833 HNRNPA0Q13151 305 aaKnown RBP12.67□□□□□ -0.38
CHD8-211ENST00000556833 FADDQ13158 208 aa12.67□□□□□ -0.38
CHD8-211ENST00000556833 SCARB2Q14108 478 aa12.67□□□□□ -0.38
CHD8-211ENST00000556833 NKPD1Q17RQ9 610 aa12.67□□□□□ -0.38
CHD8-211ENST00000556833 REEP3Q6NUK4 255 aa12.67□□□□□ -0.38
CHD8-211ENST00000556833 ULK3Q6PHR2 472 aa12.67□□□□□ -0.38
CHD8-211ENST00000556833 DHRS4L2Q6PKH6 230 aa12.67□□□□□ -0.38
CHD8-211ENST00000556833 ZNF584Q8IVC4 421 aa12.67□□□□□ -0.38
CHD8-211ENST00000556833 SKA3Q8IX90 412 aa12.67□□□□□ -0.38
CHD8-211ENST00000556833 CCDC36Q8IYA8 594 aa12.67□□□□□ -0.38
CHD8-211ENST00000556833 LSMEM1Q8N8F7 131 aa12.67□□□□□ -0.38
CHD8-211ENST00000556833 SMYD1Q8NB12 490 aa12.67□□□□□ -0.38
CHD8-211ENST00000556833 ADPRHL1Q8NDY3 354 aa12.67□□□□□ -0.38
CHD8-211ENST00000556833 RDH5Q92781 318 aa12.67□□□□□ -0.38
CHD8-211ENST00000556833 EPYCQ99645 322 aa12.67□□□□□ -0.38
CHD8-211ENST00000556833 RAD21L1Q9H4I0 556 aa12.67□□□□□ -0.38
CHD8-211ENST00000556833 C12orf10Q9HB07 376 aa12.67□□□□□ -0.38
CHD8-211ENST00000556833 TMEM27Q9HBJ8 222 aa12.67□□□□□ -0.38
CHD8-211ENST00000556833 TAAR3PQ9P1P4 343 aa12.67□□□□□ -0.38
CHD8-211ENST00000556833 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.67□□□□□ -0.38
CHD8-211ENST00000556833 TESQ9UGI8 421 aaKnown RBP12.67□□□□□ -0.38
CHD8-211ENST00000556833 SLC13A4Q9UKG4 626 aa12.67□□□□□ -0.38
CHD8-211ENST00000556833 A0A0B4J2E0 115 aa12.66□□□□□ -0.38
CHD8-211ENST00000556833 A0A1B0GX12 115 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms