RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, human

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHMT2-223	ENST00000556689	RP2	O75695	350 aa		10.84	□□□□□ -0.67
SHMT2-223	ENST00000556689	MPZL1	O95297	269 aa		10.84	□□□□□ -0.67
SHMT2-223	ENST00000556689	HNRNPCL4	P0DMR1	293 aa		10.84	□□□□□ -0.67
SHMT2-223	ENST00000556689	NAT2	P11245	290 aa		10.84	□□□□□ -0.67
SHMT2-223	ENST00000556689	ETFA	P13804	333 aa		10.84	□□□□□ -0.67
SHMT2-223	ENST00000556689	CRAT	P43155	626 aa		10.84	□□□□□ -0.67
SHMT2-223	ENST00000556689	PTDSS1	P48651	473 aa	Known RBP	10.84	□□□□□ -0.67
SHMT2-223	ENST00000556689	AQP5	P55064	265 aa		10.84	□□□□□ -0.67
SHMT2-223	ENST00000556689	RAB1A	P62820	205 aa		10.84	□□□□□ -0.67
SHMT2-223	ENST00000556689	BST1	Q10588	318 aa		10.84	□□□□□ -0.67
SHMT2-223	ENST00000556689	FXN	Q16595	210 aa		10.84	□□□□□ -0.67
SHMT2-223	ENST00000556689	GLIPR1L2	Q4G1C9	344 aa		10.84	□□□□□ -0.67
SHMT2-223	ENST00000556689	FAM69A	Q5T7M9	428 aa		10.84	□□□□□ -0.67
SHMT2-223	ENST00000556689	CARD17	Q5XLA6	110 aa		10.84	□□□□□ -0.67
SHMT2-223	ENST00000556689	SHISA2	Q6UWI4	295 aa		10.84	□□□□□ -0.67
SHMT2-223	ENST00000556689	ZNF627	Q7L945	461 aa		10.84	□□□□□ -0.67
SHMT2-223	ENST00000556689	C1QL2	Q7Z5L3	287 aa		10.84	□□□□□ -0.67
SHMT2-223	ENST00000556689	UEVLD	Q8IX04	471 aa		10.84	□□□□□ -0.67
SHMT2-223	ENST00000556689	OR4M2	Q8NGB6	313 aa		10.84	□□□□□ -0.67
SHMT2-223	ENST00000556689	ZNF417	Q8TAU3	575 aa		10.84	□□□□□ -0.67
SHMT2-223	ENST00000556689	SLC38A5	Q8WUX1	472 aa		10.84	□□□□□ -0.67
SHMT2-223	ENST00000556689	TAAR8	Q969N4	342 aa		10.84	□□□□□ -0.67
SHMT2-223	ENST00000556689	ZNF587	Q96SQ5	575 aa	Predicted RBP	10.84	□□□□□ -0.67
SHMT2-223	ENST00000556689	SIKE1	Q9BRV8	207 aa		10.84	□□□□□ -0.67
SHMT2-223	ENST00000556689	ZNF747	Q9BV97	191 aa		10.84	□□□□□ -0.67
SHMT2-223	ENST00000556689	NUF2	Q9BZD4	464 aa		10.84	□□□□□ -0.67
SHMT2-223	ENST00000556689	ZNF665	Q9H7R5	613 aa		10.84	□□□□□ -0.67
SHMT2-223	ENST00000556689	ZNF696	Q9H7X3	374 aa		10.84	□□□□□ -0.67
SHMT2-223	ENST00000556689	B3GAT2	Q9NPZ5	323 aa		10.84	□□□□□ -0.67
SHMT2-223	ENST00000556689	MYEF2	Q9P2K5	600 aa	Known RBP	10.84	□□□□□ -0.67
SHMT2-223	ENST00000556689	GPR160	Q9UJ42	338 aa		10.84	□□□□□ -0.67
SHMT2-223	ENST00000556689	CHST2	Q9Y4C5	530 aa		10.84	□□□□□ -0.67
SHMT2-223	ENST00000556689	PCDHGB1	Q9Y5G3	927 aa		10.84	□□□□□ -0.67
SHMT2-223	ENST00000556689		A0A1W2PPW3	197 aa		10.83	□□□□□ -0.68
SHMT2-223	ENST00000556689	MS4A18	H0YCH9	400 aa		10.83	□□□□□ -0.68
SHMT2-223	ENST00000556689		J3QLI3	93 aa		10.83	□□□□□ -0.68
SHMT2-223	ENST00000556689	TMPRSS2	O15393	492 aa		10.83	□□□□□ -0.68
SHMT2-223	ENST00000556689	PLPP2	O43688	288 aa		10.83	□□□□□ -0.68
SHMT2-223	ENST00000556689	TRAF3IP2	O43734	574 aa	Predicted RBP	10.83	□□□□□ -0.68
SHMT2-223	ENST00000556689	FZD7	O75084	574 aa		10.83	□□□□□ -0.68
SHMT2-223	ENST00000556689	NCR1	O76036	304 aa		10.83	□□□□□ -0.68
SHMT2-223	ENST00000556689	RAB36	O95755	333 aa		10.83	□□□□□ -0.68
SHMT2-223	ENST00000556689	BCHE	P06276	602 aa		10.83	□□□□□ -0.68
SHMT2-223	ENST00000556689	CBL	P22681	906 aa		10.83	□□□□□ -0.68
SHMT2-223	ENST00000556689	IL12A	P29459	219 aa		10.83	□□□□□ -0.68
SHMT2-223	ENST00000556689	GRPR	P30550	384 aa		10.83	□□□□□ -0.68
SHMT2-223	ENST00000556689	LSP1	P33241	339 aa		10.83	□□□□□ -0.68
SHMT2-223	ENST00000556689	SELENOV	P59797	346 aa		10.83	□□□□□ -0.68
SHMT2-223	ENST00000556689	DSTN	P60981	165 aa		10.83	□□□□□ -0.68
SHMT2-223	ENST00000556689	HOXC5	Q00444	222 aa		10.83	□□□□□ -0.68
SHMT2-223	ENST00000556689	MVK	Q03426	396 aa		10.83	□□□□□ -0.68
SHMT2-223	ENST00000556689	FOXL1	Q12952	345 aa		10.83	□□□□□ -0.68
SHMT2-223	ENST00000556689	MS4A18	Q3C1V0	323 aa		10.83	□□□□□ -0.68
SHMT2-223	ENST00000556689	MMEL1	Q495T6	779 aa		10.83	□□□□□ -0.68
SHMT2-223	ENST00000556689	C5orf46	Q6UWT4	87 aa		10.83	□□□□□ -0.68
SHMT2-223	ENST00000556689	CPLX4	Q7Z7G2	160 aa		10.83	□□□□□ -0.68
SHMT2-223	ENST00000556689	SNX32	Q86XE0	403 aa		10.83	□□□□□ -0.68
SHMT2-223	ENST00000556689	BPIFB2	Q8N4F0	458 aa		10.83	□□□□□ -0.68
SHMT2-223	ENST00000556689	ZDHHC22	Q8N966	263 aa		10.83	□□□□□ -0.68
SHMT2-223	ENST00000556689	SLC38A4	Q969I6	547 aa		10.83	□□□□□ -0.68
SHMT2-223	ENST00000556689	SLC35B4	Q969S0	331 aa		10.83	□□□□□ -0.68
SHMT2-223	ENST00000556689	C7orf26	Q96N11	449 aa		10.83	□□□□□ -0.68
SHMT2-223	ENST00000556689	ZBTB18	Q99592	522 aa		10.83	□□□□□ -0.68
SHMT2-223	ENST00000556689	SLC6A7	Q99884	636 aa		10.83	□□□□□ -0.68
SHMT2-223	ENST00000556689	EMC6	Q9BV81	110 aa		10.83	□□□□□ -0.68
SHMT2-223	ENST00000556689	TMPRSS13	Q9BYE2	586 aa		10.83	□□□□□ -0.68
SHMT2-223	ENST00000556689	C20orf27	Q9GZN8	174 aa		10.83	□□□□□ -0.68
SHMT2-223	ENST00000556689	C12orf10	Q9HB07	376 aa		10.83	□□□□□ -0.68
SHMT2-223	ENST00000556689	NTN4	Q9HB63	628 aa		10.83	□□□□□ -0.68
SHMT2-223	ENST00000556689	DDX28	Q9NUL7	540 aa	Known RBP	10.83	□□□□□ -0.68
SHMT2-223	ENST00000556689	TAAR3P	Q9P1P4	343 aa		10.83	□□□□□ -0.68
SHMT2-223	ENST00000556689	RPS6KB2	Q9UBS0	482 aa		10.83	□□□□□ -0.68
SHMT2-223	ENST00000556689	FBXL3	Q9UKT7	428 aa		10.83	□□□□□ -0.68
SHMT2-223	ENST00000556689	TRAV36DV7	A0A075B6V5	113 aa		10.82	□□□□□ -0.68
SHMT2-223	ENST00000556689	TMEM247	A6NEH6	219 aa		10.82	□□□□□ -0.68
SHMT2-223	ENST00000556689	TRPC5OS	A6NMA1	111 aa		10.82	□□□□□ -0.68
SHMT2-223	ENST00000556689	ZNF726	A6NNF4	738 aa		10.82	□□□□□ -0.68
SHMT2-223	ENST00000556689	CDC14B	O60729	498 aa		10.82	□□□□□ -0.68
SHMT2-223	ENST00000556689	HLA-DOB	P13765	273 aa		10.82	□□□□□ -0.68
SHMT2-223	ENST00000556689	NQO1	P15559	274 aa	Known RBP	10.82	□□□□□ -0.68
SHMT2-223	ENST00000556689	FPR2	P25090	351 aa		10.82	□□□□□ -0.68
SHMT2-223	ENST00000556689	MAGEB1	P43366	347 aa		10.82	□□□□□ -0.68
SHMT2-223	ENST00000556689	GIPR	P48546	466 aa		10.82	□□□□□ -0.68
SHMT2-223	ENST00000556689	MVD	P53602	400 aa		10.82	□□□□□ -0.68
SHMT2-223	ENST00000556689	TEK	Q02763	1124 aa		10.82	□□□□□ -0.68
SHMT2-223	ENST00000556689	RAB39A	Q14964	217 aa		10.82	□□□□□ -0.68
SHMT2-223	ENST00000556689	MFSD13A	Q14CX5	517 aa		10.82	□□□□□ -0.68
SHMT2-223	ENST00000556689	NKPD1	Q17RQ9	610 aa		10.82	□□□□□ -0.68
SHMT2-223	ENST00000556689	ALKBH6	Q3KRA9	238 aa		10.82	□□□□□ -0.68
SHMT2-223	ENST00000556689	PDLIM3	Q53GG5	364 aa	Predicted RBP	10.82	□□□□□ -0.68
SHMT2-223	ENST00000556689	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	10.82	□□□□□ -0.68
SHMT2-223	ENST00000556689	OGFOD2	Q6N063	350 aa		10.82	□□□□□ -0.68
SHMT2-223	ENST00000556689	TMEM154	Q6P9G4	183 aa		10.82	□□□□□ -0.68
SHMT2-223	ENST00000556689	C6orf89	Q6UWU4	347 aa		10.82	□□□□□ -0.68
SHMT2-223	ENST00000556689	ADPRHL1	Q8NDY3	354 aa		10.82	□□□□□ -0.68
SHMT2-223	ENST00000556689	RAB39B	Q96DA2	213 aa		10.82	□□□□□ -0.68
SHMT2-223	ENST00000556689	MEAF6	Q9HAF1	191 aa		10.82	□□□□□ -0.68
SHMT2-223	ENST00000556689	ESM1	Q9NQ30	184 aa		10.82	□□□□□ -0.68
SHMT2-223	ENST00000556689	HINT3	Q9NQE9	182 aa	Known RBP	10.82	□□□□□ -0.68
SHMT2-223	ENST00000556689	AIG1	Q9NVV5	245 aa		10.82	□□□□□ -0.68

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