RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 C4orf17Q53FE4 359 aa10□□□□□ -0.81
FOXN3-212ENST00000556541 TMEM201Q5SNT2 666 aa10□□□□□ -0.81
FOXN3-212ENST00000556541 ANKRD34AQ69YU3 496 aa10□□□□□ -0.81
FOXN3-212ENST00000556541 MEX3DQ86XN8 651 aaKnown RBP10□□□□□ -0.81
FOXN3-212ENST00000556541 TMEM123Q8N131 208 aa10□□□□□ -0.81
FOXN3-212ENST00000556541 POMGNT2Q8NAT1 580 aa10□□□□□ -0.81
FOXN3-212ENST00000556541 TRUB1Q8WWH5 349 aaKnown RBP10□□□□□ -0.81
FOXN3-212ENST00000556541 SLC25A44Q96H78 314 aaPredicted RBP10□□□□□ -0.81
FOXN3-212ENST00000556541 BOD1Q96IK1 185 aa10□□□□□ -0.81
FOXN3-212ENST00000556541 TSPAN32Q96QS1 320 aa10□□□□□ -0.81
FOXN3-212ENST00000556541 KCNK17Q96T54 332 aa10□□□□□ -0.81
FOXN3-212ENST00000556541 IFT27Q9BW83 186 aa10□□□□□ -0.81
FOXN3-212ENST00000556541 ENKD1Q9H0I2 346 aa10□□□□□ -0.81
FOXN3-212ENST00000556541 PIGMQ9H3S5 423 aa10□□□□□ -0.81
FOXN3-212ENST00000556541 TOR3AQ9H497 397 aa10□□□□□ -0.81
FOXN3-212ENST00000556541 CMC2Q9NRP2 79 aa10□□□□□ -0.81
FOXN3-212ENST00000556541 PLSCR4Q9NRQ2 329 aa10□□□□□ -0.81
FOXN3-212ENST00000556541 VSX1Q9NZR4 365 aaPredicted RBP10□□□□□ -0.81
FOXN3-212ENST00000556541 GRHPRQ9UBQ7 328 aa10□□□□□ -0.81
FOXN3-212ENST00000556541 FOXD3Q9UJU5 478 aaPredicted RBP10□□□□□ -0.81
FOXN3-212ENST00000556541 TINAGQ9UJW2 476 aa10□□□□□ -0.81
FOXN3-212ENST00000556541 HSPE1-MOB4S4R3N1 261 aa10□□□□□ -0.81
FOXN3-212ENST00000556541 HIVEP3Q5T1R4 2406 aa9.99□□□□□ -0.81
FOXN3-212ENST00000556541 C11orf98E9PRG8 122 aa9.99□□□□□ -0.81
FOXN3-212ENST00000556541 RPL36A-HNRNPH2H7BZ11 118 aa9.99□□□□□ -0.81
FOXN3-212ENST00000556541 M0R3G1 203 aa9.99□□□□□ -0.81
FOXN3-212ENST00000556541 MPZL2O60487 215 aa9.99□□□□□ -0.81
FOXN3-212ENST00000556541 TNFSF13O75888 250 aa9.99□□□□□ -0.81
FOXN3-212ENST00000556541 SOX14O95416 240 aa9.99□□□□□ -0.81
FOXN3-212ENST00000556541 SNAP29O95721 258 aa9.99□□□□□ -0.81
FOXN3-212ENST00000556541 PLGP00747 810 aaPredicted RBP9.99□□□□□ -0.81
FOXN3-212ENST00000556541 IFNGP01579 166 aa9.99□□□□□ -0.81
FOXN3-212ENST00000556541 IGHG1P01857 330 aa9.99□□□□□ -0.81
FOXN3-212ENST00000556541 F13BP05160 661 aa9.99□□□□□ -0.81
FOXN3-212ENST00000556541 PGA4P0DJD7 388 aa9.99□□□□□ -0.81
FOXN3-212ENST00000556541 PGA3P0DJD8 388 aa9.99□□□□□ -0.81
FOXN3-212ENST00000556541 TMIGD3P0DMS9 266 aaPredicted RBP9.99□□□□□ -0.81
FOXN3-212ENST00000556541 HLA-DOBP13765 273 aa9.99□□□□□ -0.81
FOXN3-212ENST00000556541 IFNGR1P15260 489 aa9.99□□□□□ -0.81
FOXN3-212ENST00000556541 ACADSP16219 412 aa9.99□□□□□ -0.81
FOXN3-212ENST00000556541 GGT2P36268 569 aa9.99□□□□□ -0.81
FOXN3-212ENST00000556541 KIR2DL2P43627 348 aaPredicted RBP9.99□□□□□ -0.81
FOXN3-212ENST00000556541 OR3A2P47893 321 aa9.99□□□□□ -0.81
FOXN3-212ENST00000556541 CENPAP49450 140 aa9.99□□□□□ -0.81
FOXN3-212ENST00000556541 ADARB1P78563 741 aaKnown RBP9.99□□□□□ -0.81
FOXN3-212ENST00000556541 TEKQ02763 1124 aa9.99□□□□□ -0.81
FOXN3-212ENST00000556541 KRR1Q13601 381 aaKnown RBP9.99□□□□□ -0.81
FOXN3-212ENST00000556541 GINS1Q14691 196 aa9.99□□□□□ -0.81
FOXN3-212ENST00000556541 SLC25A30Q5SVS4 291 aa9.99□□□□□ -0.81
FOXN3-212ENST00000556541 ZNF362Q5T0B9 420 aaPredicted RBP9.99□□□□□ -0.81
FOXN3-212ENST00000556541 GPAT4Q86UL3 456 aa9.99□□□□□ -0.81
FOXN3-212ENST00000556541 TUSC5Q8IXB3 177 aa9.99□□□□□ -0.81
FOXN3-212ENST00000556541 MARVELD2Q8N4S9 558 aa9.99□□□□□ -0.81
FOXN3-212ENST00000556541 DHRSXQ8N5I4 330 aa9.99□□□□□ -0.81
FOXN3-212ENST00000556541 OR4Q3Q8NH05 313 aa9.99□□□□□ -0.81
FOXN3-212ENST00000556541 RND1Q92730 232 aa9.99□□□□□ -0.81
FOXN3-212ENST00000556541 TMEM54Q969K7 222 aa9.99□□□□□ -0.81
FOXN3-212ENST00000556541 NMD3Q96D46 503 aaKnown RBP9.99□□□□□ -0.81
FOXN3-212ENST00000556541 ZNF570Q96NI8 536 aa9.99□□□□□ -0.81
FOXN3-212ENST00000556541 ZNF385AQ96PM9 386 aaKnown RBP9.99□□□□□ -0.81
FOXN3-212ENST00000556541 SLC38A2Q96QD8 506 aa9.99□□□□□ -0.81
FOXN3-212ENST00000556541 OR2M2Q96R28 347 aa9.99□□□□□ -0.81
FOXN3-212ENST00000556541 MBOAT4Q96T53 435 aa9.99□□□□□ -0.81
FOXN3-212ENST00000556541 DDOQ99489 341 aa9.99□□□□□ -0.81
FOXN3-212ENST00000556541 FAM118AQ9NWS6 357 aa9.99□□□□□ -0.81
FOXN3-212ENST00000556541 MALT1Q9UDY8 824 aa9.99□□□□□ -0.81
FOXN3-212ENST00000556541 ZNF346Q9UL40 294 aaKnown RBP9.99□□□□□ -0.81
FOXN3-212ENST00000556541 OSGIN2Q9Y236 505 aa9.99□□□□□ -0.81
FOXN3-212ENST00000556541 NOSIPQ9Y314 301 aaKnown RBP9.99□□□□□ -0.81
FOXN3-212ENST00000556541 ALPK2Q86TB3 2170 aa9.99□□□□□ -0.81
FOXN3-212ENST00000556541 FREM1Q5H8C1 2179 aa9.98□□□□□ -0.81
FOXN3-212ENST00000556541 TRGV8A0A0C4DH27 118 aa9.98□□□□□ -0.81
FOXN3-212ENST00000556541 LOC100130705A0A1B0GUX0 176 aa9.98□□□□□ -0.81
FOXN3-212ENST00000556541 PRSS37A4D1T9 235 aa9.98□□□□□ -0.81
FOXN3-212ENST00000556541 SLC35F4A4IF30 521 aa9.98□□□□□ -0.81
FOXN3-212ENST00000556541 ZNF726A6NNF4 738 aa9.98□□□□□ -0.81
FOXN3-212ENST00000556541 KDM4EB2RXH2 506 aaPredicted RBP9.98□□□□□ -0.81
FOXN3-212ENST00000556541 XKRYO14609 159 aa9.98□□□□□ -0.81
FOXN3-212ENST00000556541 MSTNO14793 375 aa9.98□□□□□ -0.81
FOXN3-212ENST00000556541 SURF4O15260 269 aa9.98□□□□□ -0.81
FOXN3-212ENST00000556541 ZNHIT1O43257 154 aa9.98□□□□□ -0.81
FOXN3-212ENST00000556541 SLC43A1O75387 559 aa9.98□□□□□ -0.81
FOXN3-212ENST00000556541 MRPL33O75394 65 aaKnown RBP9.98□□□□□ -0.81
FOXN3-212ENST00000556541 PPP1R3DO95685 299 aa9.98□□□□□ -0.81
FOXN3-212ENST00000556541 CGAP01215 116 aa9.98□□□□□ -0.81
FOXN3-212ENST00000556541 ZNF3P17036 446 aa9.98□□□□□ -0.81
FOXN3-212ENST00000556541 CAPGP40121 348 aa9.98□□□□□ -0.81
FOXN3-212ENST00000556541 SLC25A1P53007 311 aa9.98□□□□□ -0.81
FOXN3-212ENST00000556541 PER3P56645 1201 aa9.98□□□□□ -0.81
FOXN3-212ENST00000556541 CLDN17P56750 224 aa9.98□□□□□ -0.81
FOXN3-212ENST00000556541 CDC42P60953 191 aa9.98□□□□□ -0.81
FOXN3-212ENST00000556541 ERVK-25P63136 954 aa9.98□□□□□ -0.81
FOXN3-212ENST00000556541 MYBPC1Q00872 1141 aa9.98□□□□□ -0.81
FOXN3-212ENST00000556541 ITGADQ13349 1161 aa9.98□□□□□ -0.81
FOXN3-212ENST00000556541 MRPL49Q13405 166 aaKnown RBP9.98□□□□□ -0.81
FOXN3-212ENST00000556541 LRRC36Q1X8D7 754 aa9.98□□□□□ -0.81
FOXN3-212ENST00000556541 NRN1LQ496H8 165 aa9.98□□□□□ -0.81
FOXN3-212ENST00000556541 MESTQ5EB52 335 aa9.98□□□□□ -0.81
FOXN3-212ENST00000556541 THEM4Q5T1C6 240 aa9.98□□□□□ -0.81
FOXN3-212ENST00000556541 C10orf128Q5T292 105 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms