RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 CRYBB2P43320 205 aa11.85□□□□□ -0.51
ACTN1-219ENST00000556432 GLO1Q04760 184 aa11.85□□□□□ -0.51
ACTN1-219ENST00000556432 CAMK2DQ13557 499 aa11.85□□□□□ -0.51
ACTN1-219ENST00000556432 MFSD13AQ14CX5 517 aa11.85□□□□□ -0.51
ACTN1-219ENST00000556432 WHAMMP3Q1A5X7 153 aa11.85□□□□□ -0.51
ACTN1-219ENST00000556432 SNX32Q86XE0 403 aa11.85□□□□□ -0.51
ACTN1-219ENST00000556432 UEVLDQ8IX04 471 aa11.85□□□□□ -0.51
ACTN1-219ENST00000556432 BCL6BQ8N143 479 aaPredicted RBP11.85□□□□□ -0.51
ACTN1-219ENST00000556432 MIER2Q8N344 545 aa11.85□□□□□ -0.51
ACTN1-219ENST00000556432 SYT14Q8NB59 555 aa11.85□□□□□ -0.51
ACTN1-219ENST00000556432 GLB1L3Q8NCI6 653 aaPredicted RBP11.85□□□□□ -0.51
ACTN1-219ENST00000556432 OR6N1Q8NGY5 312 aa11.85□□□□□ -0.51
ACTN1-219ENST00000556432 ZNF417Q8TAU3 575 aa11.85□□□□□ -0.51
ACTN1-219ENST00000556432 SYNPRQ8TBG9 265 aa11.85□□□□□ -0.51
ACTN1-219ENST00000556432 PNPT1Q8TCS8 783 aaKnown RBP11.85□□□□□ -0.51
ACTN1-219ENST00000556432 POP5Q969H6 163 aaKnown RBP11.85□□□□□ -0.51
ACTN1-219ENST00000556432 KTI12Q96EK9 354 aaPredicted RBP11.85□□□□□ -0.51
ACTN1-219ENST00000556432 C1orf147Q96MC9 270 aaPredicted RBP11.85□□□□□ -0.51
ACTN1-219ENST00000556432 ZNF587Q96SQ5 575 aaPredicted RBP11.85□□□□□ -0.51
ACTN1-219ENST00000556432 PTDSS2Q9BVG9 487 aa11.85□□□□□ -0.51
ACTN1-219ENST00000556432 ULBP2Q9BZM5 246 aa11.85□□□□□ -0.51
ACTN1-219ENST00000556432 PLEK2Q9NYT0 353 aa11.85□□□□□ -0.51
ACTN1-219ENST00000556432 SRSF4Q08170 494 aaKnown RBP11.84□□□□□ -0.51
ACTN1-219ENST00000556432 RBBP4Q09028 425 aa11.84□□□□□ -0.51
ACTN1-219ENST00000556432 C20orf196Q8IYI0 205 aa11.84□□□□□ -0.51
ACTN1-219ENST00000556432 LRRC34Q8IZ02 419 aa11.84□□□□□ -0.51
ACTN1-219ENST00000556432 TRIML2Q8N7C3 387 aa11.84□□□□□ -0.51
ACTN1-219ENST00000556432 C11orf40Q8WZ69 217 aa11.84□□□□□ -0.51
ACTN1-219ENST00000556432 CCL17Q92583 94 aa11.84□□□□□ -0.51
ACTN1-219ENST00000556432 GTF3AQ92664 365 aaKnown RBP11.84□□□□□ -0.51
ACTN1-219ENST00000556432 TMIGD2Q96BF3 282 aa11.84□□□□□ -0.51
ACTN1-219ENST00000556432 ZNF75AQ96N20 296 aa11.84□□□□□ -0.51
ACTN1-219ENST00000556432 FOXB1Q99853 325 aa11.84□□□□□ -0.51
ACTN1-219ENST00000556432 EMC6Q9BV81 110 aa11.84□□□□□ -0.51
ACTN1-219ENST00000556432 MS4A7Q9GZW8 240 aaPredicted RBP11.84□□□□□ -0.51
ACTN1-219ENST00000556432 DENND2DQ9H6A0 471 aaPredicted RBP11.84□□□□□ -0.51
ACTN1-219ENST00000556432 CDH20Q9HBT6 801 aa11.84□□□□□ -0.51
ACTN1-219ENST00000556432 RPS6KB2Q9UBS0 482 aa11.84□□□□□ -0.51
ACTN1-219ENST00000556432 ZNF443Q9Y2A4 671 aaPredicted RBP11.84□□□□□ -0.51
ACTN1-219ENST00000556432 AUP1Q9Y679 476 aa11.84□□□□□ -0.51
ACTN1-219ENST00000556432 CCDC154A6NI56 674 aa11.83□□□□□ -0.52
ACTN1-219ENST00000556432 TRAF3IP2O43734 574 aaPredicted RBP11.83□□□□□ -0.52
ACTN1-219ENST00000556432 FOXH1O75593 365 aa11.83□□□□□ -0.52
ACTN1-219ENST00000556432 GPANK1O95872 356 aa11.83□□□□□ -0.52
ACTN1-219ENST00000556432 PATE4P0C8F1 98 aa11.83□□□□□ -0.52
ACTN1-219ENST00000556432 GRPRP30550 384 aa11.83□□□□□ -0.52
ACTN1-219ENST00000556432 S100A3P33764 101 aa11.83□□□□□ -0.52
ACTN1-219ENST00000556432 ERVS71-1P61550 626 aa11.83□□□□□ -0.52
ACTN1-219ENST00000556432 CASP8Q14790 479 aa11.83□□□□□ -0.52
ACTN1-219ENST00000556432 LARS2Q15031 903 aaKnown RBP11.83□□□□□ -0.52
ACTN1-219ENST00000556432 SLC9A3R2Q15599 337 aa11.83□□□□□ -0.52
ACTN1-219ENST00000556432 OCLNQ16625 522 aa11.83□□□□□ -0.52
ACTN1-219ENST00000556432 SPANXN4Q5MJ08 99 aa11.83□□□□□ -0.52
ACTN1-219ENST00000556432 COX20Q5RI15 118 aa11.83□□□□□ -0.52
ACTN1-219ENST00000556432 BRICD5Q6PL45 260 aa11.83□□□□□ -0.52
ACTN1-219ENST00000556432 H1FNTQ75WM6 255 aaPredicted RBP11.83□□□□□ -0.52
ACTN1-219ENST00000556432 SERPINA11Q86U17 422 aa11.83□□□□□ -0.52
ACTN1-219ENST00000556432 MNS1Q8NEH6 495 aa11.83□□□□□ -0.52
ACTN1-219ENST00000556432 DEFB108BQ8NET1 73 aa11.83□□□□□ -0.52
ACTN1-219ENST00000556432 SLC30A7Q8NEW0 376 aa11.83□□□□□ -0.52
ACTN1-219ENST00000556432 UBE2FQ969M7 185 aa11.83□□□□□ -0.52
ACTN1-219ENST00000556432 TRIM44Q96DX7 344 aaPredicted RBP11.83□□□□□ -0.52
ACTN1-219ENST00000556432 ELMOD3Q96FG2 381 aa11.83□□□□□ -0.52
ACTN1-219ENST00000556432 ZNF48Q96MX3 618 aaPredicted RBP11.83□□□□□ -0.52
ACTN1-219ENST00000556432 PANX1Q96RD7 426 aa11.83□□□□□ -0.52
ACTN1-219ENST00000556432 MRI1Q9BV20 369 aa11.83□□□□□ -0.52
ACTN1-219ENST00000556432 MMP27Q9H306 513 aa11.83□□□□□ -0.52
ACTN1-219ENST00000556432 ARMC7Q9H6L4 198 aa11.83□□□□□ -0.52
ACTN1-219ENST00000556432 ASIC5Q9NY37 505 aa11.83□□□□□ -0.52
ACTN1-219ENST00000556432 NKIRAS2Q9NYR9 191 aa11.83□□□□□ -0.52
ACTN1-219ENST00000556432 ZNF224Q9NZL3 707 aa11.83□□□□□ -0.52
ACTN1-219ENST00000556432 PDP1Q9P0J1 537 aaPredicted RBP11.83□□□□□ -0.52
ACTN1-219ENST00000556432 PURGQ9UJV8 347 aaKnown RBP11.83□□□□□ -0.52
ACTN1-219ENST00000556432 PRDM4Q9UKN5 801 aa11.83□□□□□ -0.52
ACTN1-219ENST00000556432 NBEAL2Q6ZNJ1 2754 aa11.82□□□□□ -0.52
ACTN1-219ENST00000556432 ZNF726A6NNF4 738 aa11.82□□□□□ -0.52
ACTN1-219ENST00000556432 M0QZ24 198 aa11.82□□□□□ -0.52
ACTN1-219ENST00000556432 OR2T1O43869 369 aa11.82□□□□□ -0.52
ACTN1-219ENST00000556432 SERPINI2O75830 405 aa11.82□□□□□ -0.52
ACTN1-219ENST00000556432 ALX3O95076 343 aa11.82□□□□□ -0.52
ACTN1-219ENST00000556432 SHBGP04278 402 aa11.82□□□□□ -0.52
ACTN1-219ENST00000556432 SERPINA5P05154 406 aa11.82□□□□□ -0.52
ACTN1-219ENST00000556432 FAM153BP0C7A2 387 aa11.82□□□□□ -0.52
ACTN1-219ENST00000556432 OR8G3PP0DMU2 310 aa11.82□□□□□ -0.52
ACTN1-219ENST00000556432 CCL2P13500 99 aa11.82□□□□□ -0.52
ACTN1-219ENST00000556432 MAKP20794 623 aa11.82□□□□□ -0.52
ACTN1-219ENST00000556432 MTNR1AP48039 350 aa11.82□□□□□ -0.52
ACTN1-219ENST00000556432 CLNS1AP54105 237 aaKnown RBP11.82□□□□□ -0.52
ACTN1-219ENST00000556432 TXNL4AP83876 142 aaKnown RBP11.82□□□□□ -0.52
ACTN1-219ENST00000556432 HOXC5Q00444 222 aa11.82□□□□□ -0.52
ACTN1-219ENST00000556432 EGR4Q05215 589 aa11.82□□□□□ -0.52
ACTN1-219ENST00000556432 MOGQ16653 247 aa11.82□□□□□ -0.52
ACTN1-219ENST00000556432 FAM69AQ5T7M9 428 aa11.82□□□□□ -0.52
ACTN1-219ENST00000556432 ZNF621Q6ZSS3 439 aa11.82□□□□□ -0.52
ACTN1-219ENST00000556432 C1QL4Q86Z23 238 aa11.82□□□□□ -0.52
ACTN1-219ENST00000556432 CLIP4Q8N3C7 705 aa11.82□□□□□ -0.52
ACTN1-219ENST00000556432 SLC38A4Q969I6 547 aa11.82□□□□□ -0.52
ACTN1-219ENST00000556432 TAAR8Q969N4 342 aa11.82□□□□□ -0.52
ACTN1-219ENST00000556432 TESCQ96BS2 214 aa11.82□□□□□ -0.52
ACTN1-219ENST00000556432 CCDC115Q96NT0 180 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms