RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 HSD17B1P14061 328 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 PAX7P23759 505 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 CD40P25942 277 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 CDH11P55287 796 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 PRPS1P60891 318 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 KRT72Q14CN4 511 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 CEACAM16Q2WEN9 425 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 SAMD4BQ5PRF9 694 aaKnown RBP10.09□□□□□ -0.79
SLIRP-205ENST00000556310 ANKRD16Q6P6B7 361 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 FKBP9P1Q75LS8 142 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 HIST3H2AQ7L7L0 130 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 C20orf196Q8IYI0 205 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 ALDH16A1Q8IZ83 802 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 LRRC75A-AS1Q8N1F1 130 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 LRRC17Q8N6Y2 441 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 RNF148Q8N7C7 305 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 LILRB1Q8NHL6 650 aaPredicted RBP10.09□□□□□ -0.79
SLIRP-205ENST00000556310 TMEM171Q8WVE6 324 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 LIPHQ8WWY8 451 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 BCL2L2Q92843 193 aaPredicted RBP10.09□□□□□ -0.79
SLIRP-205ENST00000556310 HIST1H2ACQ93077 130 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 SGTBQ96EQ0 304 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 TXNDC15Q96J42 360 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 RADILQ96JH8 1075 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 LRR1Q96L50 414 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 ADAD1Q96M93 576 aaKnown RBP10.09□□□□□ -0.79
SLIRP-205ENST00000556310 EMC6Q9BV81 110 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 NELFAQ9H3P2 528 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 CRLF2Q9HC73 371 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 GPR35Q9HC97 309 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 MOV10Q9HCE1 1003 aaKnown RBP10.09□□□□□ -0.79
SLIRP-205ENST00000556310 B3GAT2Q9NPZ5 323 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 C20orf141Q9NUB4 165 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 FAM53CQ9NYF3 392 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 TAS2R5Q9NYW4 299 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 EGFL7Q9UHF1 273 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 MAGEL2Q9UJ55 1249 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 SAMD4AQ9UPU9 718 aaKnown RBP10.09□□□□□ -0.79
SLIRP-205ENST00000556310 SNX13Q9Y5W8 968 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 ACANP16112 2415 aa10.08□□□□□ -0.8
SLIRP-205ENST00000556310 ZNF726A6NNF4 738 aa10.08□□□□□ -0.8
SLIRP-205ENST00000556310 ZNF99A8MXY4 864 aaPredicted RBP10.08□□□□□ -0.8
SLIRP-205ENST00000556310 RNF13O43567 381 aa10.08□□□□□ -0.8
SLIRP-205ENST00000556310 PIP5K1CO60331 668 aa10.08□□□□□ -0.8
SLIRP-205ENST00000556310 GMNNO75496 209 aa10.08□□□□□ -0.8
SLIRP-205ENST00000556310 PRSS23O95084 383 aa10.08□□□□□ -0.8
SLIRP-205ENST00000556310 IFNGR1P15260 489 aa10.08□□□□□ -0.8
SLIRP-205ENST00000556310 CSNK1A1P48729 337 aa10.08□□□□□ -0.8
SLIRP-205ENST00000556310 MNAT1P51948 309 aa10.08□□□□□ -0.8
SLIRP-205ENST00000556310 BIDP55957 195 aa10.08□□□□□ -0.8
SLIRP-205ENST00000556310 UBE2NP61088 152 aaKnown RBP10.08□□□□□ -0.8
SLIRP-205ENST00000556310 ARF1P84077 181 aaKnown RBP10.08□□□□□ -0.8
SLIRP-205ENST00000556310 RPL18Q07020 188 aaKnown RBP10.08□□□□□ -0.8
SLIRP-205ENST00000556310 SPOCK1Q08629 439 aa10.08□□□□□ -0.8
SLIRP-205ENST00000556310 CAMK2DQ13557 499 aa10.08□□□□□ -0.8
SLIRP-205ENST00000556310 TRAM2Q15035 370 aa10.08□□□□□ -0.8
SLIRP-205ENST00000556310 CARD17Q5XLA6 110 aa10.08□□□□□ -0.8
SLIRP-205ENST00000556310 GLYATQ6IB77 296 aa10.08□□□□□ -0.8
SLIRP-205ENST00000556310 C16orf89Q6UX73 402 aa10.08□□□□□ -0.8
SLIRP-205ENST00000556310 SLC35D2Q76EJ3 337 aa10.08□□□□□ -0.8
SLIRP-205ENST00000556310 TGIF2LYQ8IUE0 185 aa10.08□□□□□ -0.8
SLIRP-205ENST00000556310 FITM2Q8N6M3 262 aa10.08□□□□□ -0.8
SLIRP-205ENST00000556310 CCDC197Q8NCU1 140 aa10.08□□□□□ -0.8
SLIRP-205ENST00000556310 OR6X1Q8NH79 312 aa10.08□□□□□ -0.8
SLIRP-205ENST00000556310 NEUROG1Q92886 237 aa10.08□□□□□ -0.8
SLIRP-205ENST00000556310 FNDC11Q9BVV2 318 aa10.08□□□□□ -0.8
SLIRP-205ENST00000556310 ULBP2Q9BZM5 246 aa10.08□□□□□ -0.8
SLIRP-205ENST00000556310 CXorf56Q9H5V9 222 aa10.08□□□□□ -0.8
SLIRP-205ENST00000556310 GORASP2Q9H8Y8 452 aa10.08□□□□□ -0.8
SLIRP-205ENST00000556310 MAN2C1Q9NTJ4 1040 aa10.08□□□□□ -0.8
SLIRP-205ENST00000556310 DCAF13Q9NV06 445 aaKnown RBP10.08□□□□□ -0.8
SLIRP-205ENST00000556310 ENPP4Q9Y6X5 453 aa10.08□□□□□ -0.8
SLIRP-205ENST00000556310 USF3Q68DE3 2245 aa10.08□□□□□ -0.8
SLIRP-205ENST00000556310 A0A096LPE4 126 aa10.07□□□□□ -0.8
SLIRP-205ENST00000556310 A0A1W2PPZ6 126 aa10.07□□□□□ -0.8
SLIRP-205ENST00000556310 NPIPB13A6NJU9 1138 aa10.07□□□□□ -0.8
SLIRP-205ENST00000556310 NPIPB4C9JG80 1138 aa10.07□□□□□ -0.8
SLIRP-205ENST00000556310 J3KTA2 159 aa10.07□□□□□ -0.8
SLIRP-205ENST00000556310 M0R3G1 203 aa10.07□□□□□ -0.8
SLIRP-205ENST00000556310 FFAR1O14842 300 aa10.07□□□□□ -0.8
SLIRP-205ENST00000556310 TSPAN19P0C672 248 aa10.07□□□□□ -0.8
SLIRP-205ENST00000556310 DANCRP0C864 163 aa10.07□□□□□ -0.8
SLIRP-205ENST00000556310 PAX1P15863 534 aa10.07□□□□□ -0.8
SLIRP-205ENST00000556310 FUT1P19526 365 aa10.07□□□□□ -0.8
SLIRP-205ENST00000556310 YAP1P46937 504 aaKnown RBP10.07□□□□□ -0.8
SLIRP-205ENST00000556310 RPS4XP62701 263 aaKnown RBP10.07□□□□□ -0.8
SLIRP-205ENST00000556310 NKX6-1P78426 367 aaPredicted RBP10.07□□□□□ -0.8
SLIRP-205ENST00000556310 MXRA7P84157 204 aa10.07□□□□□ -0.8
SLIRP-205ENST00000556310 MELKQ14680 651 aa10.07□□□□□ -0.8
SLIRP-205ENST00000556310 C3orf36Q3SXR2 165 aa10.07□□□□□ -0.8
SLIRP-205ENST00000556310 SPATS1Q496A3 300 aa10.07□□□□□ -0.8
SLIRP-205ENST00000556310 PHYHD1Q5SRE7 291 aa10.07□□□□□ -0.8
SLIRP-205ENST00000556310 SHEQ5VZ18 495 aa10.07□□□□□ -0.8
SLIRP-205ENST00000556310 SLC22A25Q6T423 547 aa10.07□□□□□ -0.8
SLIRP-205ENST00000556310 ZNF627Q7L945 461 aa10.07□□□□□ -0.8
SLIRP-205ENST00000556310 HDDC2Q7Z4H3 204 aa10.07□□□□□ -0.8
SLIRP-205ENST00000556310 CYP4Z1Q86W10 505 aa10.07□□□□□ -0.8
SLIRP-205ENST00000556310 KRTAP1-3Q8IUG1 177 aa10.07□□□□□ -0.8
SLIRP-205ENST00000556310 WDFY1Q8IWB7 410 aa10.07□□□□□ -0.8
SLIRP-205ENST00000556310 FAM156AQ8NDB6 213 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms