RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 SVEP1Q4LDE5 3571 aa10.95□□□□□ -0.66
SNX6-207ENST00000556303 CENPBD1B2RD01 187 aa10.95□□□□□ -0.66
SNX6-207ENST00000556303 INAFM1C9JVW0 142 aa10.95□□□□□ -0.66
SNX6-207ENST00000556303 M0R3G1 203 aa10.95□□□□□ -0.66
SNX6-207ENST00000556303 FXYD1O00168 92 aa10.95□□□□□ -0.66
SNX6-207ENST00000556303 NDUFS8O00217 210 aa10.95□□□□□ -0.66
SNX6-207ENST00000556303 MRASO14807 208 aa10.95□□□□□ -0.66
SNX6-207ENST00000556303 MGRN1O60291 552 aa10.95□□□□□ -0.66
SNX6-207ENST00000556303 LYPD3O95274 346 aa10.95□□□□□ -0.66
SNX6-207ENST00000556303 THY1P04216 161 aa10.95□□□□□ -0.66
SNX6-207ENST00000556303 ASAH2BP0C7U1 165 aa10.95□□□□□ -0.66
SNX6-207ENST00000556303 THRBP10828 461 aa10.95□□□□□ -0.66
SNX6-207ENST00000556303 PTNP21246 168 aa10.95□□□□□ -0.66
SNX6-207ENST00000556303 PCSK6P29122 969 aa10.95□□□□□ -0.66
SNX6-207ENST00000556303 KRTAP1-1Q07627 177 aa10.95□□□□□ -0.66
SNX6-207ENST00000556303 HSP90B2PQ58FF3 399 aa10.95□□□□□ -0.66
SNX6-207ENST00000556303 PIWIL3Q7Z3Z3 882 aaKnown RBP10.95□□□□□ -0.66
SNX6-207ENST00000556303 LSRQ86X29 649 aaPredicted RBP10.95□□□□□ -0.66
SNX6-207ENST00000556303 OR4D11Q8NGI4 311 aa10.95□□□□□ -0.66
SNX6-207ENST00000556303 OR6N1Q8NGY5 312 aa10.95□□□□□ -0.66
SNX6-207ENST00000556303 FAM168AQ92567 244 aa10.95□□□□□ -0.66
SNX6-207ENST00000556303 ZNF837Q96EG3 531 aaPredicted RBP10.95□□□□□ -0.66
SNX6-207ENST00000556303 TXNDC15Q96J42 360 aa10.95□□□□□ -0.66
SNX6-207ENST00000556303 ZNF583Q96ND8 569 aa10.95□□□□□ -0.66
SNX6-207ENST00000556303 ULBP2Q9BZM5 246 aa10.95□□□□□ -0.66
SNX6-207ENST00000556303 MED4Q9NPJ6 270 aa10.95□□□□□ -0.66
SNX6-207ENST00000556303 MED29Q9NX70 200 aa10.95□□□□□ -0.66
SNX6-207ENST00000556303 B3GNT2Q9NY97 397 aa10.95□□□□□ -0.66
SNX6-207ENST00000556303 TAS2R5Q9NYW4 299 aa10.95□□□□□ -0.66
SNX6-207ENST00000556303 SLC7A7Q9UM01 511 aa10.95□□□□□ -0.66
SNX6-207ENST00000556303 CR1P17927 2039 aa10.95□□□□□ -0.66
SNX6-207ENST00000556303 MXRA5Q9NR99 2828 aa10.95□□□□□ -0.66
SNX6-207ENST00000556303 IGHV4-30-2A0A087WSY4 118 aa10.94□□□□□ -0.66
SNX6-207ENST00000556303 A0A096LNT2 108 aa10.94□□□□□ -0.66
SNX6-207ENST00000556303 CRLF1O75462 422 aa10.94□□□□□ -0.66
SNX6-207ENST00000556303 OR5F1O95221 314 aa10.94□□□□□ -0.66
SNX6-207ENST00000556303 CH25HO95992 272 aa10.94□□□□□ -0.66
SNX6-207ENST00000556303 MT-ND1P03886 318 aa10.94□□□□□ -0.66
SNX6-207ENST00000556303 CALCRP30988 508 aa10.94□□□□□ -0.66
SNX6-207ENST00000556303 CSNK1A1P48729 337 aa10.94□□□□□ -0.66
SNX6-207ENST00000556303 EVX1P49640 407 aa10.94□□□□□ -0.66
SNX6-207ENST00000556303 PPOXP50336 477 aa10.94□□□□□ -0.66
SNX6-207ENST00000556303 CRYBA2P53672 197 aa10.94□□□□□ -0.66
SNX6-207ENST00000556303 ADIPOQQ15848 244 aa10.94□□□□□ -0.66
SNX6-207ENST00000556303 NRN1LQ496H8 165 aa10.94□□□□□ -0.66
SNX6-207ENST00000556303 PHYHD1Q5SRE7 291 aa10.94□□□□□ -0.66
SNX6-207ENST00000556303 REP15Q6BDI9 236 aa10.94□□□□□ -0.66
SNX6-207ENST00000556303 WDR88Q6ZMY6 472 aa10.94□□□□□ -0.66
SNX6-207ENST00000556303 ZNF813Q6ZN06 617 aa10.94□□□□□ -0.66
SNX6-207ENST00000556303 SLC35D2Q76EJ3 337 aa10.94□□□□□ -0.66
SNX6-207ENST00000556303 HDDC2Q7Z4H3 204 aa10.94□□□□□ -0.66
SNX6-207ENST00000556303 ARPINQ7Z6K5 226 aa10.94□□□□□ -0.66
SNX6-207ENST00000556303 DPPA2Q7Z7J5 298 aa10.94□□□□□ -0.66
SNX6-207ENST00000556303 MDP1Q86V88 176 aa10.94□□□□□ -0.66
SNX6-207ENST00000556303 RBM45Q8IUH3 476 aaKnown RBP10.94□□□□□ -0.66
SNX6-207ENST00000556303 ZNF540Q8NDQ6 660 aa10.94□□□□□ -0.66
SNX6-207ENST00000556303 RP9Q8TA86 221 aaKnown RBP10.94□□□□□ -0.66
SNX6-207ENST00000556303 VANGL1Q8TAA9 524 aaPredicted RBP10.94□□□□□ -0.66
SNX6-207ENST00000556303 C10orf105Q8TEF2 133 aa10.94□□□□□ -0.66
SNX6-207ENST00000556303 C10orf82Q8WW14 230 aa10.94□□□□□ -0.66
SNX6-207ENST00000556303 LIPHQ8WWY8 451 aa10.94□□□□□ -0.66
SNX6-207ENST00000556303 FBXO17Q96EF6 278 aa10.94□□□□□ -0.66
SNX6-207ENST00000556303 SLC25A44Q96H78 314 aaPredicted RBP10.94□□□□□ -0.66
SNX6-207ENST00000556303 TNFRSF13CQ96RJ3 184 aa10.94□□□□□ -0.66
SNX6-207ENST00000556303 FOXB1Q99853 325 aa10.94□□□□□ -0.66
SNX6-207ENST00000556303 EMC6Q9BV81 110 aa10.94□□□□□ -0.66
SNX6-207ENST00000556303 GLTPQ9NZD2 209 aa10.94□□□□□ -0.66
SNX6-207ENST00000556303 STX18Q9P2W9 335 aaKnown RBP10.94□□□□□ -0.66
SNX6-207ENST00000556303 SPEF1Q9Y4P9 236 aa10.94□□□□□ -0.66
SNX6-207ENST00000556303 CAPN7Q9Y6W3 813 aa10.94□□□□□ -0.66
SNX6-207ENST00000556303 CHD3Q12873 2000 aaKnown RBP10.93□□□□□ -0.66
SNX6-207ENST00000556303 IGHV2OR16-5A0A0B4J2B6 119 aa10.93□□□□□ -0.66
SNX6-207ENST00000556303 LOC100653049A0A140TA62 436 aa10.93□□□□□ -0.66
SNX6-207ENST00000556303 FAM220BPB1ANY3 271 aa10.93□□□□□ -0.66
SNX6-207ENST00000556303 LRRN3E7EW58 273 aa10.93□□□□□ -0.66
SNX6-207ENST00000556303 RNF13O43567 381 aa10.93□□□□□ -0.66
SNX6-207ENST00000556303 KRT34O76011 436 aa10.93□□□□□ -0.66
SNX6-207ENST00000556303 UBL3O95164 117 aa10.93□□□□□ -0.66
SNX6-207ENST00000556303 ERCC1P07992 297 aaPredicted RBP10.93□□□□□ -0.66
SNX6-207ENST00000556303 OR4A8P0C604 315 aa10.93□□□□□ -0.66
SNX6-207ENST00000556303 IFNGR1P15260 489 aa10.93□□□□□ -0.66
SNX6-207ENST00000556303 IFNA8P32881 189 aa10.93□□□□□ -0.66
SNX6-207ENST00000556303 PDLIM4P50479 330 aa10.93□□□□□ -0.66
SNX6-207ENST00000556303 BIDP55957 195 aa10.93□□□□□ -0.66
SNX6-207ENST00000556303 VLDLRP98155 873 aa10.93□□□□□ -0.66
SNX6-207ENST00000556303 HGFACQ04756 655 aa10.93□□□□□ -0.66
SNX6-207ENST00000556303 CAMK2DQ13557 499 aa10.93□□□□□ -0.66
SNX6-207ENST00000556303 GSG1Q2KHT4 349 aa10.93□□□□□ -0.66
SNX6-207ENST00000556303 RABL3Q5HYI8 236 aa10.93□□□□□ -0.66
SNX6-207ENST00000556303 CARD17Q5XLA6 110 aa10.93□□□□□ -0.66
SNX6-207ENST00000556303 CGB2Q6NT52 195 aa10.93□□□□□ -0.66
SNX6-207ENST00000556303 CARM1Q86X55 608 aa10.93□□□□□ -0.66
SNX6-207ENST00000556303 ZNF525Q8N782 197 aa10.93□□□□□ -0.66
SNX6-207ENST00000556303 TMEM54Q969K7 222 aa10.93□□□□□ -0.66
SNX6-207ENST00000556303 ZNF566Q969W8 418 aa10.93□□□□□ -0.66
SNX6-207ENST00000556303 PRSS27Q9BQR3 290 aa10.93□□□□□ -0.66
SNX6-207ENST00000556303 RAB1BQ9H0U4 201 aa10.93□□□□□ -0.66
SNX6-207ENST00000556303 TMEM160Q9NX00 188 aa10.93□□□□□ -0.66
SNX6-207ENST00000556303 SH3GLB1Q9Y371 365 aa10.93□□□□□ -0.66
SNX6-207ENST00000556303 LOC390937A0A1W2PQ73 354 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms