RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 LRIF1Q5T3J3 769 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 TMEM225Q6GV28 225 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 OR2A2Q6IF42 318 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 CLEC18BQ6UXF7 455 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 PLEKHM3Q6ZWE6 761 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 FCRLAQ7L513 359 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 SERPINA11Q86U17 422 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 P3H2Q8IVL5 708 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 MSRB3Q8IXL7 192 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 ZNF440Q8IYI8 595 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 ZNF100Q8IYN0 542 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 UBE2J2Q8N2K1 259 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 C10orf111Q8N326 155 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 GTPBP8Q8N3Z3 284 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-237ENST00000556274 RNF152Q8N8N0 203 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 CLEC18CQ8NCF0 446 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 C11orf65Q8NCR3 313 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 NAXEQ8NCW5 288 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 LINC01560Q8TB33 94 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 ST8SIA1Q92185 356 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 PMM1Q92871 262 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 DDIT4LQ96D03 193 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 CMTM5Q96DZ9 223 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 ZHX1-C8orf76Q96EF9 292 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 KLHL15Q96M94 604 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 HIST1H2AAQ96QV6 131 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 PRR25Q96S07 402 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 CCT8L2Q96SF2 557 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 ZNF559Q9BR84 538 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 NAA11Q9BSU3 229 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-237ENST00000556274 RBM24Q9BX46 236 aaKnown RBP4.14□□□□□ -1.75
ATXN3-237ENST00000556274 TAPBPLQ9BX59 468 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 OR11A1Q9GZK7 315 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 OPN3Q9H1Y3 402 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-237ENST00000556274 IKZF5Q9H5V7 419 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 CCDC134Q9H6E4 229 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 TMEM27Q9HBJ8 222 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 A4GALTQ9NPC4 353 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 SLC52A3Q9NQ40 469 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 HEYLQ9NQ87 328 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-237ENST00000556274 ACER3Q9NUN7 267 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 TMEM45AQ9NWC5 275 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 ADPRHL2Q9NX46 363 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 KLHL13Q9P2N7 655 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 DNAJB11Q9UBS4 358 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 ADAM21Q9UKJ8 722 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 PROCRQ9UNN8 238 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 ARL2BPQ9Y2Y0 163 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 SH3GLB1Q9Y371 365 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 SPIN1Q9Y657 262 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-237ENST00000556274 PTPN13Q12923 2485 aa4.14□□□□□ -1.75
ATXN3-237ENST00000556274 USP9XQ93008 2570 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-237ENST00000556274 CHD3Q12873 2000 aaKnown RBP4.13□□□□□ -1.75
ATXN3-237ENST00000556274 TMEM72A0PK05 275 aa4.13□□□□□ -1.75
ATXN3-237ENST00000556274 PRORSD1PA6NEY8 169 aa4.13□□□□□ -1.75
ATXN3-237ENST00000556274 TUBAL3A6NHL2 446 aa4.13□□□□□ -1.75
ATXN3-237ENST00000556274 CPSF4LA6NMK7 179 aaKnown RBP4.13□□□□□ -1.75
ATXN3-237ENST00000556274 BBIP1A8MTZ0 92 aa4.13□□□□□ -1.75
ATXN3-237ENST00000556274 M0R3H8 397 aa4.13□□□□□ -1.75
ATXN3-237ENST00000556274 HNRNPRO43390 633 aaKnown RBP4.13□□□□□ -1.75
ATXN3-237ENST00000556274 SNX3O60493 162 aa4.13□□□□□ -1.75
ATXN3-237ENST00000556274 DCTN3O75935 186 aa4.13□□□□□ -1.75
ATXN3-237ENST00000556274 KRT33AO76009 404 aa4.13□□□□□ -1.75
ATXN3-237ENST00000556274 ZNF682O95780 498 aa4.13□□□□□ -1.75
ATXN3-237ENST00000556274 NPPAP01160 153 aa4.13□□□□□ -1.75
ATXN3-237ENST00000556274 IFNA14P01570 189 aa4.13□□□□□ -1.75
ATXN3-237ENST00000556274 FCGR2AP12318 317 aa4.13□□□□□ -1.75
ATXN3-237ENST00000556274 POU2F1P14859 743 aa4.13□□□□□ -1.75
ATXN3-237ENST00000556274 ETS2P15036 469 aa4.13□□□□□ -1.75
ATXN3-237ENST00000556274 NCK1P16333 377 aa4.13□□□□□ -1.75
ATXN3-237ENST00000556274 ZNF17P17021 662 aa4.13□□□□□ -1.75
ATXN3-237ENST00000556274 TCN1P20061 433 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-237ENST00000556274 AGAP20933 346 aa4.13□□□□□ -1.75
ATXN3-237ENST00000556274 TNFSF4P23510 183 aa4.13□□□□□ -1.75
ATXN3-237ENST00000556274 GTF2E2P29084 291 aaKnown RBP4.13□□□□□ -1.75
ATXN3-237ENST00000556274 CEACAM8P31997 349 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-237ENST00000556274 SLC1A3P43003 542 aa4.13□□□□□ -1.75
ATXN3-237ENST00000556274 MAGEA8P43361 318 aa4.13□□□□□ -1.75
ATXN3-237ENST00000556274 RPS5P46782 204 aaKnown RBP4.13□□□□□ -1.75
ATXN3-237ENST00000556274 YAP1P46937 504 aaKnown RBP4.13□□□□□ -1.75
ATXN3-237ENST00000556274 MRPL19P49406 292 aaKnown RBP4.13□□□□□ -1.75
ATXN3-237ENST00000556274 DIO1P49895 249 aa4.13□□□□□ -1.75
ATXN3-237ENST00000556274 ASCL1P50553 236 aa4.13□□□□□ -1.75
ATXN3-237ENST00000556274 TIRAPP58753 221 aa4.13□□□□□ -1.75
ATXN3-237ENST00000556274 PSME3P61289 254 aa4.13□□□□□ -1.75
ATXN3-237ENST00000556274 CSNK2A1P68400 391 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-237ENST00000556274 SLC35A1P78382 337 aa4.13□□□□□ -1.75
ATXN3-237ENST00000556274 LIPEQ05469 1076 aa4.13□□□□□ -1.75
ATXN3-237ENST00000556274 EPS8Q12929 822 aa4.13□□□□□ -1.75
ATXN3-237ENST00000556274 SELENBP1Q13228 472 aa4.13□□□□□ -1.75
ATXN3-237ENST00000556274 CEACAM7Q14002 265 aa4.13□□□□□ -1.75
ATXN3-237ENST00000556274 OR1Q1Q15612 314 aa4.13□□□□□ -1.75
ATXN3-237ENST00000556274 OR7A5Q15622 319 aa4.13□□□□□ -1.75
ATXN3-237ENST00000556274 MAPK11Q15759 364 aa4.13□□□□□ -1.75
ATXN3-237ENST00000556274 ZSWIM7Q19AV6 140 aa4.13□□□□□ -1.75
ATXN3-237ENST00000556274 TRMT5Q32P41 509 aaKnown RBP4.13□□□□□ -1.75
ATXN3-237ENST00000556274 SLC25A35Q3KQZ1 300 aa4.13□□□□□ -1.75
ATXN3-237ENST00000556274 LRRC23Q53EV4 343 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-237ENST00000556274 INTS11Q5TA45 600 aaKnown RBP4.13□□□□□ -1.75
ATXN3-237ENST00000556274 GKAP1Q5VSY0 366 aaPredicted RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms