RNA–Protein interactions for RNA: ENST00000556078.1

EFCAB11-210, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-210ENST00000556078 B4GALT7Q9UBV7 327 aa2.46□□□□□ -2.02
EFCAB11-210ENST00000556078 GRID1Q9ULK0 1009 aa2.46□□□□□ -2.02
EFCAB11-210ENST00000556078 SLC9A8Q9Y2E8 581 aa2.46□□□□□ -2.02
EFCAB11-210ENST00000556078 MRPS7Q9Y2R9 242 aaKnown RBP2.46□□□□□ -2.02
EFCAB11-210ENST00000556078 IGHV4-61A0A0C4DH41 118 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 A0A1B0GU03 582 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 ATP6AP2A0A1C7CYW4 349 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 A0A1W2PS18 150 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 OR6C74A6NCV1 312 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 FAM166BA8MTA8 275 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 K7EQM0 130 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 SCAMP2O15127 329 aaKnown RBP2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 SAP30O75446 220 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 TRMUO75648 421 aaKnown RBP2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 PALMO75781 387 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 OR2B3O76000 313 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 KRT33AO76009 404 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 OR4F21O95013 312 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 TXNDC12O95881 172 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 NGFP01138 241 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 APOEP02649 317 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 OPN1MWP04001 364 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 UQCRHP07919 91 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 CTAGE8P0CG41 777 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 CT45A8P0DMV1 189 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 CT45A9P0DMV2 189 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 OPN1MW2P0DN77 364 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 OPN1MW3P0DN78 364 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 KRT3P12035 628 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 HNF1AP20823 631 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 GPX3P22352 226 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 OMGP23515 440 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 OR1E1P30953 314 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 CHI3L1P36222 383 aaPredicted RBP2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 PTGFRP43088 359 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 NPY2RP49146 381 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 SNRPD1P62314 119 aaKnown RBP2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 RPS4XP62701 263 aaKnown RBP2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 UBA52P62987 128 aaKnown RBP2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 IRX1P78414 480 aaPredicted RBP2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 CDKL1Q00532 357 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 GNA12Q03113 381 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 CYTH1Q15438 398 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 EXT1Q16394 746 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 SNRNP35Q16560 246 aaKnown RBP2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 ADPRMQ3LIE5 342 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 CT45A2Q5DJT8 189 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 C1orf220Q5T0J3 134 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 CAPN13Q6MZZ7 669 aaPredicted RBP2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 LRRC8BQ6P9F7 803 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 ZNF730Q6ZMV8 503 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 NDUFAF7Q7L592 441 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 SLC26A9Q7LBE3 791 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 SETD3Q86TU7 594 aaPredicted RBP2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 ZNF547Q8IVP9 402 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 ZDHHC21Q8IVQ6 265 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 DCUN1D3Q8IWE4 304 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 CTAGE4Q8IX94 777 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 KIRREL3Q8IZU9 778 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 PARP8Q8N3A8 854 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 FAM89BQ8N5H3 189 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 TEX26Q8N6G2 289 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 STPG4Q8N801 248 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 ATP6V0D2Q8N8Y2 350 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 TMEM178AQ8NBL3 297 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 DDHD1Q8NEL9 900 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 OR4C3Q8NH37 302 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 RAB3IL1Q8TBN0 382 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 CHPT1Q8WUD6 406 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 TUBGCP3Q96CW5 907 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 OMA1Q96E52 524 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 SCRN2Q96FV2 425 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 C1orf147Q96MC9 270 aaPredicted RBP2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 VPS35Q96QK1 796 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 ZNF607Q96SK3 696 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 S1PR3Q99500 378 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 RBM24Q9BX46 236 aaKnown RBP2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 WWP1Q9H0M0 922 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 SLITRK2Q9H156 845 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 EVA1AQ9H8M9 152 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 WDR54Q9H977 334 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 COG4Q9H9E3 785 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 VPS37BQ9H9H4 285 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 KLHL8Q9P2G9 620 aaPredicted RBP2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 EXTL2Q9UBQ6 330 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 KLHL21Q9UJP4 597 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 CLEC4AQ9UMR7 237 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 DIMT1Q9UNQ2 313 aaKnown RBP2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 PPP2R2CQ9Y2T4 447 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 PPIAL4AQ9Y536 164 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 ALMS1Q8TCU4 4167 aa2.45□□□□□ -2.02
EFCAB11-210ENST00000556078 IGLV3-10A0A075B6K4 115 aa2.44□□□□□ -2.02
EFCAB11-210ENST00000556078 A0A087WUV0 522 aaPredicted RBP2.44□□□□□ -2.02
EFCAB11-210ENST00000556078 A0A087WZ39 114 aa2.44□□□□□ -2.02
EFCAB11-210ENST00000556078 A0A0J9YVX5 310 aa2.44□□□□□ -2.02
EFCAB11-210ENST00000556078 A0A0U1RQV5 110 aa2.44□□□□□ -2.02
EFCAB11-210ENST00000556078 A0A1W2PQ72 361 aa2.44□□□□□ -2.02
EFCAB11-210ENST00000556078 SH3PXD2BA1X283 911 aa2.44□□□□□ -2.02
EFCAB11-210ENST00000556078 LRP5LA4QPB2 252 aa2.44□□□□□ -2.02
EFCAB11-210ENST00000556078 CCT8L1PA6NM43 557 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms