RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 KDM4EB2RXH2 506 aaPredicted RBP9.12□□□□□ -0.95
NEK9-205ENST00000555405 FTCDNL1E5RQL4 147 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 RGS10O43665 173 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 MTNR1AP48039 350 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 PER3P56645 1201 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 RPS3AP61247 264 aaKnown RBP9.12□□□□□ -0.95
NEK9-205ENST00000555405 RPL27P61353 136 aaKnown RBP9.12□□□□□ -0.95
NEK9-205ENST00000555405 FHL1Q13642 323 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 MEP1BQ16820 701 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 CMPK2Q5EBM0 449 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 FAM180AQ6UWF9 173 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 KCTD8Q6ZWB6 473 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 CNEP1R1Q8N9A8 125 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 HDAC2Q92769 488 aaKnown RBP9.12□□□□□ -0.95
NEK9-205ENST00000555405 MIB2Q96AX9 1013 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 TMIGD2Q96BF3 282 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 TIMP4Q99727 224 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 PSD2Q9BQI7 771 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 RBM24Q9BX46 236 aaKnown RBP9.12□□□□□ -0.95
NEK9-205ENST00000555405 NRIP3Q9NQ35 241 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 TIGARQ9NQ88 270 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 CMC2Q9NRP2 79 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 PAK1IP1Q9NWT1 392 aaPredicted RBP9.12□□□□□ -0.95
NEK9-205ENST00000555405 A0A1W2PPL8 197 aa9.11□□□□□ -0.95
NEK9-205ENST00000555405 AQP8O94778 261 aa9.11□□□□□ -0.95
NEK9-205ENST00000555405 UCNP55089 124 aa9.11□□□□□ -0.95
NEK9-205ENST00000555405 MESTQ5EB52 335 aa9.11□□□□□ -0.95
NEK9-205ENST00000555405 VASNQ6EMK4 673 aa9.11□□□□□ -0.95
NEK9-205ENST00000555405 ESPNLQ6ZVH7 1005 aa9.11□□□□□ -0.95
NEK9-205ENST00000555405 ARIH2OSQ8N7S6 290 aa9.11□□□□□ -0.95
NEK9-205ENST00000555405 NEIL3Q8TAT5 605 aa9.11□□□□□ -0.95
NEK9-205ENST00000555405 ZNRF4Q8WWF5 429 aa9.11□□□□□ -0.95
NEK9-205ENST00000555405 VCX3AQ9NNX9 186 aa9.11□□□□□ -0.95
NEK9-205ENST00000555405 SPRR3Q9UBC9 169 aa9.11□□□□□ -0.95
NEK9-205ENST00000555405 CLEC2DQ9UHP7 191 aa9.11□□□□□ -0.95
NEK9-205ENST00000555405 LHX6Q9UPM6 363 aa9.11□□□□□ -0.95
NEK9-205ENST00000555405 B3GALT5Q9Y2C3 310 aa9.11□□□□□ -0.95
NEK9-205ENST00000555405 ESPL1Q14674 2120 aa9.11□□□□□ -0.95
NEK9-205ENST00000555405 A0A087WXM4 84 aa9.11□□□□□ -0.95
NEK9-205ENST00000555405 MPZL1O95297 269 aa9.11□□□□□ -0.95
NEK9-205ENST00000555405 SDHAP31040 664 aa9.11□□□□□ -0.95
NEK9-205ENST00000555405 SGCAQ16586 387 aa9.11□□□□□ -0.95
NEK9-205ENST00000555405 CRTC2Q53ET0 693 aaPredicted RBP9.11□□□□□ -0.95
NEK9-205ENST00000555405 TMEM81Q6P7N7 255 aa9.11□□□□□ -0.95
NEK9-205ENST00000555405 PLEKHG7Q6ZR37 379 aa9.11□□□□□ -0.95
NEK9-205ENST00000555405 FCRLAQ7L513 359 aa9.11□□□□□ -0.95
NEK9-205ENST00000555405 ZFP41Q8N8Y5 198 aa9.11□□□□□ -0.95
NEK9-205ENST00000555405 SCAIQ8N9R8 606 aa9.11□□□□□ -0.95
NEK9-205ENST00000555405 OR6N2Q8NGY6 317 aa9.11□□□□□ -0.95
NEK9-205ENST00000555405 SLC25A19Q9HC21 320 aa9.11□□□□□ -0.95
NEK9-205ENST00000555405 MRPL39Q9NYK5 338 aaKnown RBP9.11□□□□□ -0.95
NEK9-205ENST00000555405 MCTS1Q9ULC4 181 aaKnown RBP9.11□□□□□ -0.95
NEK9-205ENST00000555405 ZMIZ1Q9ULJ6 1067 aa9.11□□□□□ -0.95
NEK9-205ENST00000555405 RPL36Q9Y3U8 105 aaKnown RBP9.11□□□□□ -0.95
NEK9-205ENST00000555405 SNTNA6NMZ2 147 aa9.1□□□□□ -0.95
NEK9-205ENST00000555405 MPZL2O60487 215 aa9.1□□□□□ -0.95
NEK9-205ENST00000555405 LCKP06239 509 aa9.1□□□□□ -0.95
NEK9-205ENST00000555405 ABOP16442 354 aa9.1□□□□□ -0.95
NEK9-205ENST00000555405 CDAP32320 146 aa9.1□□□□□ -0.95
NEK9-205ENST00000555405 LSM3P62310 102 aaKnown RBP9.1□□□□□ -0.95
NEK9-205ENST00000555405 SLC25A53Q5H9E4 307 aa9.1□□□□□ -0.95
NEK9-205ENST00000555405 C5orf46Q6UWT4 87 aa9.1□□□□□ -0.95
NEK9-205ENST00000555405 WDFY1Q8IWB7 410 aa9.1□□□□□ -0.95
NEK9-205ENST00000555405 SCMH1Q96GD3 660 aa9.1□□□□□ -0.95
NEK9-205ENST00000555405 RBP7Q96R05 134 aa9.1□□□□□ -0.95
NEK9-205ENST00000555405 OR2B2Q9GZK3 357 aa9.1□□□□□ -0.95
NEK9-205ENST00000555405 RNF32Q9H0A6 362 aa9.1□□□□□ -0.95
NEK9-205ENST00000555405 TXNIPQ9H3M7 391 aa9.1□□□□□ -0.95
NEK9-205ENST00000555405 COA3Q9Y2R0 106 aaPredicted RBP9.1□□□□□ -0.95
NEK9-205ENST00000555405 NBEAQ8NFP9 2946 aa9.1□□□□□ -0.95
NEK9-205ENST00000555405 CLCA1A8K7I4 914 aa9.1□□□□□ -0.95
NEK9-205ENST00000555405 SELENOFO60613 162 aa9.1□□□□□ -0.95
NEK9-205ENST00000555405 UQCRC1P31930 480 aa9.1□□□□□ -0.95
NEK9-205ENST00000555405 SELENOPP49908 381 aa9.1□□□□□ -0.95
NEK9-205ENST00000555405 GFRA1P56159 465 aa9.1□□□□□ -0.95
NEK9-205ENST00000555405 RAC3P60763 192 aa9.1□□□□□ -0.95
NEK9-205ENST00000555405 RBM48Q5RL73 367 aaKnown RBP9.1□□□□□ -0.95
NEK9-205ENST00000555405 ZNF362Q5T0B9 420 aaPredicted RBP9.1□□□□□ -0.95
NEK9-205ENST00000555405 OR2G6Q5TZ20 316 aa9.1□□□□□ -0.95
NEK9-205ENST00000555405 THEM6Q8WUY1 208 aa9.1□□□□□ -0.95
NEK9-205ENST00000555405 RFKQ969G6 155 aa9.1□□□□□ -0.95
NEK9-205ENST00000555405 DTNBP1Q96EV8 351 aa9.1□□□□□ -0.95
NEK9-205ENST00000555405 TEAD3Q99594 435 aa9.1□□□□□ -0.95
NEK9-205ENST00000555405 BRD7Q9NPI1 651 aa9.1□□□□□ -0.95
NEK9-205ENST00000555405 SMAD9O15198 467 aaKnown RBP9.1□□□□□ -0.95
NEK9-205ENST00000555405 PRODHO43272 600 aa9.1□□□□□ -0.95
NEK9-205ENST00000555405 EIF1BO60739 113 aaKnown RBP9.1□□□□□ -0.95
NEK9-205ENST00000555405 DBTP11182 482 aaKnown RBP9.1□□□□□ -0.95
NEK9-205ENST00000555405 MYL12AP19105 171 aa9.1□□□□□ -0.95
NEK9-205ENST00000555405 GRK5P34947 590 aa9.1□□□□□ -0.95
NEK9-205ENST00000555405 GUCA1AP43080 201 aaPredicted RBP9.1□□□□□ -0.95
NEK9-205ENST00000555405 LHX2P50458 406 aa9.1□□□□□ -0.95
NEK9-205ENST00000555405 MEPCEQ7L2J0 689 aaKnown RBP9.1□□□□□ -0.95
NEK9-205ENST00000555405 AAED1Q7RTV5 226 aa9.1□□□□□ -0.95
NEK9-205ENST00000555405 GGNQ86UU5 652 aa9.1□□□□□ -0.95
NEK9-205ENST00000555405 SATL1Q86VE3 508 aa9.1□□□□□ -0.95
NEK9-205ENST00000555405 TUSC5Q8IXB3 177 aa9.1□□□□□ -0.95
NEK9-205ENST00000555405 OR6V1Q8N148 313 aa9.1□□□□□ -0.95
NEK9-205ENST00000555405 NPEPL1Q8NDH3 523 aa9.1□□□□□ -0.95
NEK9-205ENST00000555405 TRUB1Q8WWH5 349 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms