RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 DFNA5O60443 496 aa3.74□□□□□ -1.81
VRK1-205ENST00000555402 TNFSF13O75888 250 aa3.74□□□□□ -1.81
VRK1-205ENST00000555402 IGHV2-5P01817 119 aa3.74□□□□□ -1.81
VRK1-205ENST00000555402 CT62P0C5K7 136 aa3.74□□□□□ -1.81
VRK1-205ENST00000555402 CHTF8P0CG12 524 aa3.74□□□□□ -1.81
VRK1-205ENST00000555402 HPGDP15428 266 aa3.74□□□□□ -1.81
VRK1-205ENST00000555402 ACLYP53396 1101 aa3.74□□□□□ -1.81
VRK1-205ENST00000555402 MRPS22P82650 360 aaKnown RBP3.74□□□□□ -1.81
VRK1-205ENST00000555402 ARHGAP19Q14CB8 494 aa3.74□□□□□ -1.81
VRK1-205ENST00000555402 IL17AQ16552 155 aa3.74□□□□□ -1.81
VRK1-205ENST00000555402 CCDC14Q49A88 953 aa3.74□□□□□ -1.81
VRK1-205ENST00000555402 SLC25A48Q6ZT89 311 aaKnown RBP3.74□□□□□ -1.81
VRK1-205ENST00000555402 RFLNAQ6ZTI6 216 aa3.74□□□□□ -1.81
VRK1-205ENST00000555402 NIPA1Q7RTP0 329 aa3.74□□□□□ -1.81
VRK1-205ENST00000555402 RALGPS2Q86X27 583 aaPredicted RBP3.74□□□□□ -1.81
VRK1-205ENST00000555402 PUSL1Q8N0Z8 303 aaKnown RBP3.74□□□□□ -1.81
VRK1-205ENST00000555402 FAM81AQ8TBF8 368 aa3.74□□□□□ -1.81
VRK1-205ENST00000555402 ZIM3Q96PE6 472 aa3.74□□□□□ -1.81
VRK1-205ENST00000555402 SH3GL1Q99961 368 aa3.74□□□□□ -1.81
VRK1-205ENST00000555402 NEK6Q9HC98 313 aa3.74□□□□□ -1.81
VRK1-205ENST00000555402 EXD2Q9NVH0 621 aa3.74□□□□□ -1.81
VRK1-205ENST00000555402 ADAM22Q9P0K1 906 aa3.74□□□□□ -1.81
VRK1-205ENST00000555402 NEUROG3Q9Y4Z2 214 aa3.74□□□□□ -1.81
VRK1-205ENST00000555402 ARPC4-TTLL3A0A0A6YYG9 625 aa3.73□□□□□ -1.81
VRK1-205ENST00000555402 A0A0G2JLM5 398 aa3.73□□□□□ -1.81
VRK1-205ENST00000555402 GJE1A6NN92 205 aa3.73□□□□□ -1.81
VRK1-205ENST00000555402 IGLV1-47P01700 117 aa3.73□□□□□ -1.81
VRK1-205ENST00000555402 ALDOBP05062 364 aa3.73□□□□□ -1.81
VRK1-205ENST00000555402 SYKP43405 635 aa3.73□□□□□ -1.81
VRK1-205ENST00000555402 NUP107P57740 925 aa3.73□□□□□ -1.81
VRK1-205ENST00000555402 CAVIN4Q5BKX8 364 aa3.73□□□□□ -1.81
VRK1-205ENST00000555402 CASC10Q5T4H9 136 aa3.73□□□□□ -1.81
VRK1-205ENST00000555402 LRRC66Q68CR7 880 aa3.73□□□□□ -1.81
VRK1-205ENST00000555402 SLC8B1Q6J4K2 584 aa3.73□□□□□ -1.81
VRK1-205ENST00000555402 OTUD6AQ7L8S5 288 aa3.73□□□□□ -1.81
VRK1-205ENST00000555402 ASCL5Q7RTU5 278 aa3.73□□□□□ -1.81
VRK1-205ENST00000555402 THOC6Q86W42 341 aaKnown RBP3.73□□□□□ -1.81
VRK1-205ENST00000555402 TMEM61Q8N0U2 210 aa3.73□□□□□ -1.81
VRK1-205ENST00000555402 ZNF557Q8N988 423 aaPredicted RBP3.73□□□□□ -1.81
VRK1-205ENST00000555402 CCDC54Q8NEL0 328 aa3.73□□□□□ -1.81
VRK1-205ENST00000555402 SLC22A8Q8TCC7 542 aa3.73□□□□□ -1.81
VRK1-205ENST00000555402 AGR3Q8TD06 166 aa3.73□□□□□ -1.81
VRK1-205ENST00000555402 GPR151Q8TDV0 419 aa3.73□□□□□ -1.81
VRK1-205ENST00000555402 NDRG1Q92597 394 aaKnown RBP3.73□□□□□ -1.81
VRK1-205ENST00000555402 FGF14Q92915 247 aa3.73□□□□□ -1.81
VRK1-205ENST00000555402 RARRES2Q99969 163 aa3.73□□□□□ -1.81
VRK1-205ENST00000555402 KCTD14Q9BQ13 255 aaPredicted RBP3.73□□□□□ -1.81
VRK1-205ENST00000555402 NRIP2Q9BQI9 281 aa3.73□□□□□ -1.81
VRK1-205ENST00000555402 SRMSQ9H3Y6 488 aa3.73□□□□□ -1.81
VRK1-205ENST00000555402 NANOGQ9H9S0 305 aa3.73□□□□□ -1.81
VRK1-205ENST00000555402 CRLF2Q9HC73 371 aa3.73□□□□□ -1.81
VRK1-205ENST00000555402 PITPNC1Q9UKF7 332 aa3.73□□□□□ -1.81
VRK1-205ENST00000555402 ZNF256Q9Y2P7 627 aaPredicted RBP3.73□□□□□ -1.81
VRK1-205ENST00000555402 ARHGAP23Q9P227 1491 aa3.73□□□□□ -1.81
VRK1-205ENST00000555402 WDR19Q8NEZ3 1342 aa3.72□□□□□ -1.81
VRK1-205ENST00000555402 SMCO2A6NFE2 343 aa3.72□□□□□ -1.81
VRK1-205ENST00000555402 OR2AG2A6NM03 316 aa3.72□□□□□ -1.81
VRK1-205ENST00000555402 KLLNB2CW77 178 aa3.72□□□□□ -1.81
VRK1-205ENST00000555402 TCP11X1B4DZS4 312 aa3.72□□□□□ -1.81
VRK1-205ENST00000555402 CLOCKO15516 846 aa3.72□□□□□ -1.81
VRK1-205ENST00000555402 FAM189A1O60320 539 aa3.72□□□□□ -1.81
VRK1-205ENST00000555402 NPIPB7O75200 414 aa3.72□□□□□ -1.81
VRK1-205ENST00000555402 KRT14P02533 472 aa3.72□□□□□ -1.81
VRK1-205ENST00000555402 FGGP02679 453 aa3.72□□□□□ -1.81
VRK1-205ENST00000555402 FTH1P02794 183 aa3.72□□□□□ -1.81
VRK1-205ENST00000555402 GNB2P62879 340 aa3.72□□□□□ -1.81
VRK1-205ENST00000555402 DMTNQ08495 405 aa3.72□□□□□ -1.81
VRK1-205ENST00000555402 LCN12Q6JVE5 192 aa3.72□□□□□ -1.81
VRK1-205ENST00000555402 C6orf89Q6UWU4 347 aa3.72□□□□□ -1.81
VRK1-205ENST00000555402 IL34Q6ZMJ4 242 aa3.72□□□□□ -1.81
VRK1-205ENST00000555402 ZNF836Q6ZNA1 936 aa3.72□□□□□ -1.81
VRK1-205ENST00000555402 CENPQQ7L2Z9 268 aaPredicted RBP3.72□□□□□ -1.81
VRK1-205ENST00000555402 SDR42E1Q8WUS8 393 aa3.72□□□□□ -1.81
VRK1-205ENST00000555402 KIFAP3Q92845 792 aa3.72□□□□□ -1.81
VRK1-205ENST00000555402 CCDC126Q96EE4 140 aa3.72□□□□□ -1.81
VRK1-205ENST00000555402 GSDMAQ96QA5 445 aa3.72□□□□□ -1.81
VRK1-205ENST00000555402 CHP1Q99653 195 aa3.72□□□□□ -1.81
VRK1-205ENST00000555402 ATP5SQ99766 215 aa3.72□□□□□ -1.81
VRK1-205ENST00000555402 OR11A1Q9GZK7 315 aa3.72□□□□□ -1.81
VRK1-205ENST00000555402 CLSTN2Q9H4D0 955 aa3.72□□□□□ -1.81
VRK1-205ENST00000555402 CLMPQ9H6B4 373 aa3.72□□□□□ -1.81
VRK1-205ENST00000555402 ANKRA2Q9H9E1 313 aa3.72□□□□□ -1.81
VRK1-205ENST00000555402 CLCF1Q9UBD9 225 aa3.72□□□□□ -1.81
VRK1-205ENST00000555402 MSH6P52701 1360 aa3.72□□□□□ -1.81
VRK1-205ENST00000555402 PIK3R4Q99570 1358 aa3.72□□□□□ -1.81
VRK1-205ENST00000555402 RLFQ13129 1914 aa3.72□□□□□ -1.81
VRK1-205ENST00000555402 TTC41PQ6P2S7 1318 aa3.71□□□□□ -1.81
VRK1-205ENST00000555402 LRRIQ3A6PVS8 624 aaPredicted RBP3.71□□□□□ -1.82
VRK1-205ENST00000555402 AIM2O14862 343 aa3.71□□□□□ -1.82
VRK1-205ENST00000555402 OR2J3O76001 311 aa3.71□□□□□ -1.82
VRK1-205ENST00000555402 ASGR1P07306 291 aa3.71□□□□□ -1.82
VRK1-205ENST00000555402 ANXA5P08758 320 aa3.71□□□□□ -1.82
VRK1-205ENST00000555402 SLC26A3P40879 764 aa3.71□□□□□ -1.82
VRK1-205ENST00000555402 GPR6P46095 362 aaPredicted RBP3.71□□□□□ -1.82
VRK1-205ENST00000555402 NPBWR2P48146 333 aa3.71□□□□□ -1.82
VRK1-205ENST00000555402 SUB1P53999 127 aaKnown RBP eCLIP3.71□□□□□ -1.826e-12■■■□□ 19.1
VRK1-205ENST00000555402 UGT2B15P54855 530 aa3.71□□□□□ -1.82
VRK1-205ENST00000555402 RGS8P57771 180 aaPredicted RBP3.71□□□□□ -1.82
VRK1-205ENST00000555402 YWHAGP61981 247 aaKnown RBP eCLIP3.71□□□□□ -1.82
VRK1-205ENST00000555402 MECOMQ03112 1051 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms