RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 SAMD9LQ8IVG5 1584 aa3.71□□□□□ -1.82
CKS1BP1-201ENST00000555221 ARHGAP31Q2M1Z3 1444 aa3.7□□□□□ -1.82
CKS1BP1-201ENST00000555221 SYCP2Q9BX26 1530 aa3.7□□□□□ -1.82
CKS1BP1-201ENST00000555221 ARHGEF12Q9NZN5 1544 aa3.7□□□□□ -1.82
CKS1BP1-201ENST00000555221 CROCCQ5TZA2 2017 aa3.7□□□□□ -1.82
CKS1BP1-201ENST00000555221 RBMY1BA6NDE4 496 aaKnown RBP3.7□□□□□ -1.82
CKS1BP1-201ENST00000555221 RBMY1EA6NEQ0 496 aaKnown RBP3.7□□□□□ -1.82
CKS1BP1-201ENST00000555221 FAM47DPA6NHR8 397 aa3.7□□□□□ -1.82
CKS1BP1-201ENST00000555221 GJE1A6NN92 205 aa3.7□□□□□ -1.82
CKS1BP1-201ENST00000555221 CIB2O75838 187 aa3.7□□□□□ -1.82
CKS1BP1-201ENST00000555221 RBMY1DP0C7P1 496 aaKnown RBP3.7□□□□□ -1.82
CKS1BP1-201ENST00000555221 CHTF8P0CG12 524 aa3.7□□□□□ -1.82
CKS1BP1-201ENST00000555221 RBMY1A1P0DJD3 496 aaKnown RBP3.7□□□□□ -1.82
CKS1BP1-201ENST00000555221 SLC2A5P22732 501 aa3.7□□□□□ -1.82
CKS1BP1-201ENST00000555221 CASP14P31944 242 aa3.7□□□□□ -1.82
CKS1BP1-201ENST00000555221 SH3BGRP55822 239 aaPredicted RBP3.7□□□□□ -1.82
CKS1BP1-201ENST00000555221 KRTAP10-3P60369 221 aa3.7□□□□□ -1.82
CKS1BP1-201ENST00000555221 DAZ2Q13117 558 aaKnown RBP3.7□□□□□ -1.82
CKS1BP1-201ENST00000555221 ZNF630Q2M218 657 aaPredicted RBP3.7□□□□□ -1.82
CKS1BP1-201ENST00000555221 C2orf83Q53S99 150 aa3.7□□□□□ -1.82
CKS1BP1-201ENST00000555221 CCDC183Q5T5S1 534 aa3.7□□□□□ -1.82
CKS1BP1-201ENST00000555221 C1orf94Q6P1W5 598 aa3.7□□□□□ -1.82
CKS1BP1-201ENST00000555221 ZNF620Q6ZNG0 422 aa3.7□□□□□ -1.82
CKS1BP1-201ENST00000555221 RFLNAQ6ZTI6 216 aa3.7□□□□□ -1.82
CKS1BP1-201ENST00000555221 PSTKQ8IV42 348 aaKnown RBP3.7□□□□□ -1.82
CKS1BP1-201ENST00000555221 CDH26Q8IXH8 852 aa3.7□□□□□ -1.82
CKS1BP1-201ENST00000555221 SUMF2Q8NBJ7 301 aa3.7□□□□□ -1.82
CKS1BP1-201ENST00000555221 FGF14Q92915 247 aa3.7□□□□□ -1.82
CKS1BP1-201ENST00000555221 C12orf42Q96LP6 360 aa3.7□□□□□ -1.82
CKS1BP1-201ENST00000555221 MBOAT4Q96T53 435 aa3.7□□□□□ -1.82
CKS1BP1-201ENST00000555221 RASL11BQ9BPW5 248 aa3.7□□□□□ -1.82
CKS1BP1-201ENST00000555221 FAIM2Q9BWQ8 316 aa3.7□□□□□ -1.82
CKS1BP1-201ENST00000555221 LY9Q9HBG7 655 aa3.7□□□□□ -1.82
CKS1BP1-201ENST00000555221 DAZ3Q9NR90 486 aaKnown RBP3.7□□□□□ -1.82
CKS1BP1-201ENST00000555221 EXD2Q9NVH0 621 aa3.7□□□□□ -1.82
CKS1BP1-201ENST00000555221 RPS6KB2Q9UBS0 482 aa3.7□□□□□ -1.82
CKS1BP1-201ENST00000555221 SLC7A8Q9UHI5 535 aa3.7□□□□□ -1.82
CKS1BP1-201ENST00000555221 PPRC1Q5VV67 1664 aaKnown RBP3.7□□□□□ -1.82
CKS1BP1-201ENST00000555221 CDC42BPBQ9Y5S2 1711 aa3.7□□□□□ -1.82
CKS1BP1-201ENST00000555221 ADGRL2O95490 1459 aa3.69□□□□□ -1.82
CKS1BP1-201ENST00000555221 NLRP1Q9C000 1473 aa3.69□□□□□ -1.82
CKS1BP1-201ENST00000555221 A0A1W2PPV9 198 aa3.69□□□□□ -1.82
CKS1BP1-201ENST00000555221 KRTAP4-16G5E9R7 235 aaPredicted RBP3.69□□□□□ -1.82
CKS1BP1-201ENST00000555221 PSTPIP1O43586 416 aa3.69□□□□□ -1.82
CKS1BP1-201ENST00000555221 FAM189A1O60320 539 aa3.69□□□□□ -1.82
CKS1BP1-201ENST00000555221 ERLIN2O94905 339 aa3.69□□□□□ -1.82
CKS1BP1-201ENST00000555221 TMEM50AO95807 157 aa3.69□□□□□ -1.82
CKS1BP1-201ENST00000555221 GAPDHP04406 335 aaKnown RBP3.69□□□□□ -1.82
CKS1BP1-201ENST00000555221 C2P06681 752 aa3.69□□□□□ -1.82
CKS1BP1-201ENST00000555221 HPGDP15428 266 aa3.69□□□□□ -1.82
CKS1BP1-201ENST00000555221 DRD3P35462 400 aa3.69□□□□□ -1.82
CKS1BP1-201ENST00000555221 SUCLG1P53597 346 aaKnown RBP3.69□□□□□ -1.82
CKS1BP1-201ENST00000555221 GPNMBQ14956 572 aa3.69□□□□□ -1.82
CKS1BP1-201ENST00000555221 C6orf89Q6UWU4 347 aa3.69□□□□□ -1.82
CKS1BP1-201ENST00000555221 FAM228AQ86W67 206 aa3.69□□□□□ -1.82
CKS1BP1-201ENST00000555221 CDR2LQ86X02 465 aaPredicted RBP3.69□□□□□ -1.82
CKS1BP1-201ENST00000555221 PIANPQ8IYJ0 282 aa3.69□□□□□ -1.82
CKS1BP1-201ENST00000555221 OR4F6Q8NGB9 312 aa3.69□□□□□ -1.82
CKS1BP1-201ENST00000555221 SMARCD2Q92925 531 aa3.69□□□□□ -1.82
CKS1BP1-201ENST00000555221 MS4A4EQ96PG1 132 aa3.69□□□□□ -1.82
CKS1BP1-201ENST00000555221 OR8B4Q96RC9 309 aa3.69□□□□□ -1.82
CKS1BP1-201ENST00000555221 SORT1Q99523 831 aa3.69□□□□□ -1.82
CKS1BP1-201ENST00000555221 NRTNQ99748 197 aa3.69□□□□□ -1.82
CKS1BP1-201ENST00000555221 KLHL28Q9NXS3 571 aa3.69□□□□□ -1.82
CKS1BP1-201ENST00000555221 SPATA7Q9P0W8 599 aa3.69□□□□□ -1.82
CKS1BP1-201ENST00000555221 NYAP2Q9P242 653 aa3.69□□□□□ -1.82
CKS1BP1-201ENST00000555221 NUFIP1Q9UHK0 495 aaKnown RBP3.69□□□□□ -1.82
CKS1BP1-201ENST00000555221 SLC25A15Q9Y619 301 aa3.69□□□□□ -1.82
CKS1BP1-201ENST00000555221 ZNF646O15015 1829 aaPredicted RBP3.69□□□□□ -1.82
CKS1BP1-201ENST00000555221 CDC42BPAQ5VT25 1732 aa3.69□□□□□ -1.82
CKS1BP1-201ENST00000555221 PTPN23Q9H3S7 1636 aa3.69□□□□□ -1.82
CKS1BP1-201ENST00000555221 RPRD2Q5VT52 1461 aaKnown RBP3.68□□□□□ -1.82
CKS1BP1-201ENST00000555221 RICTORQ6R327 1708 aa3.68□□□□□ -1.82
CKS1BP1-201ENST00000555221 C12orf77C9JDV5 145 aa3.68□□□□□ -1.82
CKS1BP1-201ENST00000555221 AP3B1O00203 1094 aa3.68□□□□□ -1.82
CKS1BP1-201ENST00000555221 SOX15O60248 233 aa3.68□□□□□ -1.82
CKS1BP1-201ENST00000555221 MGRN1O60291 552 aa3.68□□□□□ -1.82
CKS1BP1-201ENST00000555221 INSP01308 110 aa3.68□□□□□ -1.82
CKS1BP1-201ENST00000555221 IGHV4-34P06331 123 aa3.68□□□□□ -1.82
CKS1BP1-201ENST00000555221 GIPP09681 153 aaPredicted RBP3.68□□□□□ -1.82
CKS1BP1-201ENST00000555221 UQCRFS1P1P0C7P4 283 aa3.68□□□□□ -1.82
CKS1BP1-201ENST00000555221 UBTFL1P0CB47 393 aaPredicted RBP3.68□□□□□ -1.82
CKS1BP1-201ENST00000555221 TCN1P20061 433 aaPredicted RBP3.68□□□□□ -1.82
CKS1BP1-201ENST00000555221 CTRLP40313 264 aa3.68□□□□□ -1.82
CKS1BP1-201ENST00000555221 PLP1P60201 277 aa3.68□□□□□ -1.82
CKS1BP1-201ENST00000555221 KCNJ2P63252 427 aa3.68□□□□□ -1.82
CKS1BP1-201ENST00000555221 IDI1Q13907 227 aa3.68□□□□□ -1.82
CKS1BP1-201ENST00000555221 ARHGAP19Q14CB8 494 aa3.68□□□□□ -1.82
CKS1BP1-201ENST00000555221 PPP1R7Q15435 360 aa3.68□□□□□ -1.82
CKS1BP1-201ENST00000555221 ZYG11AQ6WRX3 759 aa3.68□□□□□ -1.82
CKS1BP1-201ENST00000555221 KDM7AQ6ZMT4 941 aa3.68□□□□□ -1.82
CKS1BP1-201ENST00000555221 RALGPS2Q86X27 583 aaPredicted RBP3.68□□□□□ -1.82
CKS1BP1-201ENST00000555221 MFSD6LQ8IWD5 586 aa3.68□□□□□ -1.82
CKS1BP1-201ENST00000555221 Q8N7P7 452 aa3.68□□□□□ -1.82
CKS1BP1-201ENST00000555221 CEP112Q8N8E3 955 aa3.68□□□□□ -1.82
CKS1BP1-201ENST00000555221 SDR9C7Q8NEX9 313 aa3.68□□□□□ -1.82
CKS1BP1-201ENST00000555221 VN1R2Q8NFZ6 395 aa3.68□□□□□ -1.82
CKS1BP1-201ENST00000555221 OR2L3Q8NG85 312 aa3.68□□□□□ -1.82
CKS1BP1-201ENST00000555221 KCNG3Q8TAE7 436 aa3.68□□□□□ -1.82
CKS1BP1-201ENST00000555221 NDRG1Q92597 394 aaKnown RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms