RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 DNAJB12Q9NXW2 375 aaKnown RBP15.7■□□□□ 0.1
SHOX-204ENST00000554971 KLHL21Q9UJP4 597 aa15.7■□□□□ 0.1
SHOX-204ENST00000554971 NPFFR2Q9Y5X5 522 aa15.7■□□□□ 0.1
SHOX-204ENST00000554971 FLNCQ14315 2725 aa15.7■□□□□ 0.1
SHOX-204ENST00000554971 IGF2P01344 180 aa15.69■□□□□ 0.1
SHOX-204ENST00000554971 CD1AP06126 327 aa15.69■□□□□ 0.1
SHOX-204ENST00000554971 FBXO45P0C2W1 286 aa15.69■□□□□ 0.1
SHOX-204ENST00000554971 SLC2A2P11168 524 aaPredicted RBP15.69■□□□□ 0.1
SHOX-204ENST00000554971 AZGP1P25311 298 aaKnown RBP15.69■□□□□ 0.1
SHOX-204ENST00000554971 ATP12AP54707 1039 aa15.69■□□□□ 0.1
SHOX-204ENST00000554971 ARG2P78540 354 aa15.69■□□□□ 0.1
SHOX-204ENST00000554971 BCL2A1Q16548 175 aa15.69■□□□□ 0.1
SHOX-204ENST00000554971 NDUFA5Q16718 116 aa15.69■□□□□ 0.1
SHOX-204ENST00000554971 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.69■□□□□ 0.1
SHOX-204ENST00000554971 TRIQKQ629K1 86 aa15.69■□□□□ 0.1
SHOX-204ENST00000554971 HBMQ6B0K9 141 aa15.69■□□□□ 0.1
SHOX-204ENST00000554971 CNIH2Q6PI25 160 aa15.69■□□□□ 0.1
SHOX-204ENST00000554971 IL20RBQ6UXL0 311 aa15.69■□□□□ 0.1
SHOX-204ENST00000554971 SPATC1Q76KD6 591 aa15.69■□□□□ 0.1
SHOX-204ENST00000554971 TMEM156Q8N614 296 aa15.69■□□□□ 0.1
SHOX-204ENST00000554971 MDS2Q8NDY4 140 aa15.69■□□□□ 0.1
SHOX-204ENST00000554971 OR13C2Q8NGS9 318 aa15.69■□□□□ 0.1
SHOX-204ENST00000554971 SPACA9Q96E40 222 aaPredicted RBP15.69■□□□□ 0.1
SHOX-204ENST00000554971 HES7Q9BYE0 225 aa15.69■□□□□ 0.1
SHOX-204ENST00000554971 OR2B2Q9GZK3 357 aa15.69■□□□□ 0.1
SHOX-204ENST00000554971 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.69■□□□□ 0.1
SHOX-204ENST00000554971 FLRT3Q9NZU0 649 aa15.69■□□□□ 0.1
SHOX-204ENST00000554971 LRFN1Q9P244 771 aa15.69■□□□□ 0.1
SHOX-204ENST00000554971 MEIOCA2RUB1 952 aa15.68■□□□□ 0.1
SHOX-204ENST00000554971 IGKV1D-16P01601 117 aa15.68■□□□□ 0.1
SHOX-204ENST00000554971 CYB561P49447 251 aa15.68■□□□□ 0.1
SHOX-204ENST00000554971 FBXW4P57775 412 aa15.68■□□□□ 0.1
SHOX-204ENST00000554971 PLAURQ03405 335 aa15.68■□□□□ 0.1
SHOX-204ENST00000554971 OR1C1Q15619 314 aa15.68■□□□□ 0.1
SHOX-204ENST00000554971 ALG10BQ5I7T1 473 aa15.68■□□□□ 0.1
SHOX-204ENST00000554971 THSD4Q6ZMP0 1018 aa15.68■□□□□ 0.1
SHOX-204ENST00000554971 Q8N402 240 aa15.68■□□□□ 0.1
SHOX-204ENST00000554971 POMGNT2Q8NAT1 580 aa15.68■□□□□ 0.1
SHOX-204ENST00000554971 DUSP18Q8NEJ0 188 aa15.68■□□□□ 0.1
SHOX-204ENST00000554971 OR10G3Q8NGC4 313 aa15.68■□□□□ 0.1
SHOX-204ENST00000554971 SLC22A8Q8TCC7 542 aa15.68■□□□□ 0.1
SHOX-204ENST00000554971 MRPL48Q96GC5 212 aaKnown RBP15.68■□□□□ 0.1
SHOX-204ENST00000554971 NEDD4LQ96PU5 975 aa15.68■□□□□ 0.1
SHOX-204ENST00000554971 UTP23Q9BRU9 249 aaKnown RBP15.68■□□□□ 0.1
SHOX-204ENST00000554971 TTYH2Q9BSA4 534 aa15.68■□□□□ 0.1
SHOX-204ENST00000554971 SLC19A3Q9BZV2 496 aa15.68■□□□□ 0.1
SHOX-204ENST00000554971 ENKD1Q9H0I2 346 aa15.68■□□□□ 0.1
SHOX-204ENST00000554971 SH2D2AQ9NP31 389 aa15.68■□□□□ 0.1
SHOX-204ENST00000554971 RPS6KB2Q9UBS0 482 aa15.68■□□□□ 0.1
SHOX-204ENST00000554971 NCKAP5O14513 1909 aa15.68■□□□□ 0.1
SHOX-204ENST00000554971 MYO18BQ8IUG5 2567 aa15.68■□□□□ 0.1
SHOX-204ENST00000554971 MED12Q93074 2177 aa15.68■□□□□ 0.1
SHOX-204ENST00000554971 NPIPA5A0A0B4J1W7 369 aa15.68■□□□□ 0.1
SHOX-204ENST00000554971 NPIPA7E9PJI5 369 aa15.68■□□□□ 0.1
SHOX-204ENST00000554971 IDH3BO43837 385 aa15.68■□□□□ 0.1
SHOX-204ENST00000554971 TRIM3O75382 744 aaPredicted RBP15.68■□□□□ 0.1
SHOX-204ENST00000554971 SERPINA3P01011 423 aa15.68■□□□□ 0.1
SHOX-204ENST00000554971 NPIPA8P0DM63 369 aa15.68■□□□□ 0.1
SHOX-204ENST00000554971 HLA-DMAP28067 261 aa15.68■□□□□ 0.1
SHOX-204ENST00000554971 OC90Q02509 493 aaPredicted RBP15.68■□□□□ 0.1
SHOX-204ENST00000554971 NTRK2Q16620 822 aa15.68■□□□□ 0.1
SHOX-204ENST00000554971 KLHL12Q53G59 568 aa15.68■□□□□ 0.1
SHOX-204ENST00000554971 HACD4Q5VWC8 232 aa15.68■□□□□ 0.1
SHOX-204ENST00000554971 Q6ZS92 163 aa15.68■□□□□ 0.1
SHOX-204ENST00000554971 SYS1Q8N2H4 156 aa15.68■□□□□ 0.1
SHOX-204ENST00000554971 TMEM99Q8N816 258 aa15.68■□□□□ 0.1
SHOX-204ENST00000554971 OR10H4Q8NGA5 316 aa15.68■□□□□ 0.1
SHOX-204ENST00000554971 OMA1Q96E52 524 aa15.68■□□□□ 0.1
SHOX-204ENST00000554971 ZNF486Q96H40 463 aaPredicted RBP15.68■□□□□ 0.1
SHOX-204ENST00000554971 FRMD6Q96NE9 622 aa15.68■□□□□ 0.1
SHOX-204ENST00000554971 MFRPQ9BY79 579 aa15.68■□□□□ 0.1
SHOX-204ENST00000554971 C11orf54Q9H0W9 315 aaPredicted RBP15.68■□□□□ 0.1
SHOX-204ENST00000554971 RNF121Q9H920 327 aa15.68■□□□□ 0.1
SHOX-204ENST00000554971 ISG20L2Q9H9L3 353 aaKnown RBP15.68■□□□□ 0.1
SHOX-204ENST00000554971 ADGRL4Q9HBW9 690 aa15.68■□□□□ 0.1
SHOX-204ENST00000554971 NEK6Q9HC98 313 aa15.68■□□□□ 0.1
SHOX-204ENST00000554971 RBFOX1Q9NWB1 397 aaKnown RBP15.68■□□□□ 0.1
SHOX-204ENST00000554971 ICAM5Q9UMF0 924 aa15.68■□□□□ 0.1
SHOX-204ENST00000554971 CHCHD2Q9Y6H1 151 aaPredicted RBP15.68■□□□□ 0.1
SHOX-204ENST00000554971 ATXN7O15265 892 aaPredicted RBP15.67■□□□□ 0.1
SHOX-204ENST00000554971 SSX4O60224 188 aa15.67■□□□□ 0.1
SHOX-204ENST00000554971 TSPAN2O60636 221 aa15.67■□□□□ 0.1
SHOX-204ENST00000554971 NDUFB2O95178 105 aa15.67■□□□□ 0.1
SHOX-204ENST00000554971 NRG3P56975 720 aa15.67■□□□□ 0.1
SHOX-204ENST00000554971 RPS7P62081 194 aaKnown RBP15.67■□□□□ 0.1
SHOX-204ENST00000554971 LGALS3BPQ08380 585 aa15.67■□□□□ 0.1
SHOX-204ENST00000554971 PLCXD2Q0VAA5 305 aa15.67■□□□□ 0.1
SHOX-204ENST00000554971 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.67■□□□□ 0.1
SHOX-204ENST00000554971 OPN5Q6U736 354 aa15.67■□□□□ 0.1
SHOX-204ENST00000554971 VASH1Q7L8A9 365 aaPredicted RBP15.67■□□□□ 0.1
SHOX-204ENST00000554971 ZAR1Q86SH2 424 aa15.67■□□□□ 0.1
SHOX-204ENST00000554971 LRRC28Q86X40 367 aaPredicted RBP15.67■□□□□ 0.1
SHOX-204ENST00000554971 BCORP1Q8N888 145 aa15.67■□□□□ 0.1
SHOX-204ENST00000554971 OR5M3Q8NGP4 307 aa15.67■□□□□ 0.1
SHOX-204ENST00000554971 ENKURQ8TC29 256 aa15.67■□□□□ 0.1
SHOX-204ENST00000554971 HPF1Q9NWY4 346 aa15.67■□□□□ 0.1
SHOX-204ENST00000554971 ABI3Q9P2A4 366 aa15.67■□□□□ 0.1
SHOX-204ENST00000554971 RALYQ9UKM9 306 aaKnown RBP15.67■□□□□ 0.1
SHOX-204ENST00000554971 CD8B2A6NJW9 211 aa15.66■□□□□ 0.1
SHOX-204ENST00000554971 B4DXG7 233 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms