RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 TNFRSF10DQ9UBN6 386 aa12.81□□□□□ -0.36
SHOX2-206ENST00000554685 RCE1Q9Y256 329 aa12.81□□□□□ -0.36
SHOX2-206ENST00000554685 CHD8Q9HCK8 2581 aa12.81□□□□□ -0.36
SHOX2-206ENST00000554685 MGAQ8IWI9 3026 aa12.8□□□□□ -0.36
SHOX2-206ENST00000554685 IGKV3D-15A0A087WSY6 115 aa12.8□□□□□ -0.36
SHOX2-206ENST00000554685 ZNF716A6NP11 495 aa12.8□□□□□ -0.36
SHOX2-206ENST00000554685 TTLL8A6PVC2 850 aa12.8□□□□□ -0.36
SHOX2-206ENST00000554685 KDM4EB2RXH2 506 aaPredicted RBP12.8□□□□□ -0.36
SHOX2-206ENST00000554685 M0R129 80 aa12.8□□□□□ -0.36
SHOX2-206ENST00000554685 PRODHO43272 600 aa12.8□□□□□ -0.36
SHOX2-206ENST00000554685 ARHGEF9O43307 516 aa12.8□□□□□ -0.36
SHOX2-206ENST00000554685 RAMP1O60894 148 aa12.8□□□□□ -0.36
SHOX2-206ENST00000554685 SLC2A10O95528 541 aa12.8□□□□□ -0.36
SHOX2-206ENST00000554685 CCDC159P0C7I6 412 aa12.8□□□□□ -0.36
SHOX2-206ENST00000554685 EDN3P14138 238 aa12.8□□□□□ -0.36
SHOX2-206ENST00000554685 ABOP16442 354 aa12.8□□□□□ -0.36
SHOX2-206ENST00000554685 SLC25A1P53007 311 aa12.8□□□□□ -0.36
SHOX2-206ENST00000554685 BIDP55957 195 aa12.8□□□□□ -0.36
SHOX2-206ENST00000554685 CLDN17P56750 224 aa12.8□□□□□ -0.36
SHOX2-206ENST00000554685 TMED1Q13445 227 aa12.8□□□□□ -0.36
SHOX2-206ENST00000554685 MELKQ14680 651 aa12.8□□□□□ -0.36
SHOX2-206ENST00000554685 MESTQ5EB52 335 aa12.8□□□□□ -0.36
SHOX2-206ENST00000554685 DNM1P34Q6PK57 102 aa12.8□□□□□ -0.36
SHOX2-206ENST00000554685 UGT2A3Q6UWM9 527 aa12.8□□□□□ -0.36
SHOX2-206ENST00000554685 NHLRC1Q6VVB1 395 aa12.8□□□□□ -0.36
SHOX2-206ENST00000554685 ADGRE4PQ86SQ3 457 aa12.8□□□□□ -0.36
SHOX2-206ENST00000554685 CPOQ8IVL8 374 aa12.8□□□□□ -0.36
SHOX2-206ENST00000554685 NPEPL1Q8NDH3 523 aa12.8□□□□□ -0.36
SHOX2-206ENST00000554685 FNDC9Q8TBE3 224 aa12.8□□□□□ -0.36
SHOX2-206ENST00000554685 FAM57AQ8TBR7 257 aa12.8□□□□□ -0.36
SHOX2-206ENST00000554685 UBE2FQ969M7 185 aa12.8□□□□□ -0.36
SHOX2-206ENST00000554685 TMEM45BQ96B21 275 aa12.8□□□□□ -0.36
SHOX2-206ENST00000554685 OTULINQ96BN8 352 aa12.8□□□□□ -0.36
SHOX2-206ENST00000554685 SLC25A44Q96H78 314 aaPredicted RBP12.8□□□□□ -0.36
SHOX2-206ENST00000554685 CALHM2Q9HA72 323 aa12.8□□□□□ -0.36
SHOX2-206ENST00000554685 HINT3Q9NQE9 182 aaKnown RBP12.8□□□□□ -0.36
SHOX2-206ENST00000554685 PLCXD1Q9NUJ7 323 aa12.8□□□□□ -0.36
SHOX2-206ENST00000554685 MED29Q9NX70 200 aa12.8□□□□□ -0.36
SHOX2-206ENST00000554685 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.8□□□□□ -0.36
SHOX2-206ENST00000554685 MYRFQ9Y2G1 1151 aa12.8□□□□□ -0.36
SHOX2-206ENST00000554685 GPR52Q9Y2T5 361 aa12.8□□□□□ -0.36
SHOX2-206ENST00000554685 TPRKBQ9Y3C4 175 aa12.8□□□□□ -0.36
SHOX2-206ENST00000554685 RPL36Q9Y3U8 105 aaKnown RBP12.8□□□□□ -0.36
SHOX2-206ENST00000554685 FLVCR1Q9Y5Y0 555 aa12.8□□□□□ -0.36
SHOX2-206ENST00000554685 IRGMA1A4Y4 181 aa12.79□□□□□ -0.36
SHOX2-206ENST00000554685 PRSS37A4D1T9 235 aa12.79□□□□□ -0.36
SHOX2-206ENST00000554685 SLC22A31A6NKX4 558 aa12.79□□□□□ -0.36
SHOX2-206ENST00000554685 ZNF724A8MTY0 619 aa12.79□□□□□ -0.36
SHOX2-206ENST00000554685 FAM20BO75063 409 aa12.79□□□□□ -0.36
SHOX2-206ENST00000554685 ENTPD6O75354 484 aa12.79□□□□□ -0.36
SHOX2-206ENST00000554685 WBP4O75554 376 aaKnown RBP12.79□□□□□ -0.36
SHOX2-206ENST00000554685 TPOP07202 933 aa12.79□□□□□ -0.36
SHOX2-206ENST00000554685 KLK2P20151 261 aa12.79□□□□□ -0.36
SHOX2-206ENST00000554685 CRABP1P29762 137 aa12.79□□□□□ -0.36
SHOX2-206ENST00000554685 CDKN2AP42771 156 aaKnown RBP12.79□□□□□ -0.36
SHOX2-206ENST00000554685 CENPAP49450 140 aa12.79□□□□□ -0.36
SHOX2-206ENST00000554685 BLVRAP53004 296 aa12.79□□□□□ -0.36
SHOX2-206ENST00000554685 CDH11P55287 796 aa12.79□□□□□ -0.36
SHOX2-206ENST00000554685 CLRN1P58418 232 aa12.79□□□□□ -0.36
SHOX2-206ENST00000554685 LY6DQ14210 128 aa12.79□□□□□ -0.36
SHOX2-206ENST00000554685 SLC35D3Q5M8T2 416 aa12.79□□□□□ -0.36
SHOX2-206ENST00000554685 ZNF362Q5T0B9 420 aaPredicted RBP12.79□□□□□ -0.36
SHOX2-206ENST00000554685 LCN1P1Q5VSP4 162 aa12.79□□□□□ -0.36
SHOX2-206ENST00000554685 AADACL4Q5VUY2 407 aa12.79□□□□□ -0.36
SHOX2-206ENST00000554685 OR2A2Q6IF42 318 aa12.79□□□□□ -0.36
SHOX2-206ENST00000554685 PLBD1Q6P4A8 553 aa12.79□□□□□ -0.36
SHOX2-206ENST00000554685 GFRALQ6UXV0 394 aa12.79□□□□□ -0.36
SHOX2-206ENST00000554685 OR2T4Q8NH00 348 aa12.79□□□□□ -0.36
SHOX2-206ENST00000554685 APH1BQ8WW43 257 aa12.79□□□□□ -0.36
SHOX2-206ENST00000554685 WNT2BQ93097 391 aa12.79□□□□□ -0.36
SHOX2-206ENST00000554685 INTS12Q96CB8 462 aaKnown RBP12.79□□□□□ -0.36
SHOX2-206ENST00000554685 ZNF582Q96NG8 517 aaPredicted RBP12.79□□□□□ -0.36
SHOX2-206ENST00000554685 RBP7Q96R05 134 aa12.79□□□□□ -0.36
SHOX2-206ENST00000554685 TRIB1Q96RU8 372 aa12.79□□□□□ -0.36
SHOX2-206ENST00000554685 NMNAT3Q96T66 252 aa12.79□□□□□ -0.36
SHOX2-206ENST00000554685 TM9SF2Q99805 663 aa12.79□□□□□ -0.36
SHOX2-206ENST00000554685 BCO1Q9HAY6 547 aa12.79□□□□□ -0.36
SHOX2-206ENST00000554685 CCNB1IP1Q9NPC3 277 aa12.79□□□□□ -0.36
SHOX2-206ENST00000554685 ASF1BQ9NVP2 202 aa12.79□□□□□ -0.36
SHOX2-206ENST00000554685 PARPBPQ9NWS1 579 aa12.79□□□□□ -0.36
SHOX2-206ENST00000554685 DNAJC27Q9NZQ0 273 aa12.79□□□□□ -0.36
SHOX2-206ENST00000554685 VSX1Q9NZR4 365 aaPredicted RBP12.79□□□□□ -0.36
SHOX2-206ENST00000554685 CLCF1Q9UBD9 225 aa12.79□□□□□ -0.36
SHOX2-206ENST00000554685 MOKQ9UQ07 419 aa12.79□□□□□ -0.36
SHOX2-206ENST00000554685 CACNA1GO43497 2377 aa12.79□□□□□ -0.36
SHOX2-206ENST00000554685 SLC35F4A4IF30 521 aa12.78□□□□□ -0.36
SHOX2-206ENST00000554685 EFCAB10A6NFE3 127 aa12.78□□□□□ -0.36
SHOX2-206ENST00000554685 CD8B2A6NJW9 211 aa12.78□□□□□ -0.36
SHOX2-206ENST00000554685 OR6C65A6NJZ3 312 aa12.78□□□□□ -0.36
SHOX2-206ENST00000554685 SLC1A7O00341 560 aa12.78□□□□□ -0.36
SHOX2-206ENST00000554685 PRRG2O14669 202 aa12.78□□□□□ -0.36
SHOX2-206ENST00000554685 SLC43A1O75387 559 aa12.78□□□□□ -0.36
SHOX2-206ENST00000554685 TRMUO75648 421 aaKnown RBP12.78□□□□□ -0.36
SHOX2-206ENST00000554685 FREM3P0C091 2139 aa12.78□□□□□ -0.36
SHOX2-206ENST00000554685 HTR1FP30939 366 aa12.78□□□□□ -0.36
SHOX2-206ENST00000554685 FMO3P31513 532 aa12.78□□□□□ -0.36
SHOX2-206ENST00000554685 GABARAPL2P60520 117 aa12.78□□□□□ -0.36
SHOX2-206ENST00000554685 EIF2S3LQ2VIR3 472 aaKnown RBP12.78□□□□□ -0.36
SHOX2-206ENST00000554685 KCTD21Q4G0X4 260 aa12.78□□□□□ -0.36
SHOX2-206ENST00000554685 ACSF3Q4G176 576 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms