RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 NAT6Q93015 286 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 ISOC2Q96AB3 205 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 NTNG2Q96CW9 530 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 ATXN7L3BQ96GX2 97 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 ITCHQ96J02 903 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 CELF6Q96J87 481 aaKnown RBP1.81□□□□□ -2.12
SRP54-204ENST00000553923 JSRP1Q96MG2 331 aaPredicted RBP1.81□□□□□ -2.12
SRP54-204ENST00000553923 ZNF317Q96PQ6 595 aaPredicted RBP1.81□□□□□ -2.12
SRP54-204ENST00000553923 ACBD6Q9BR61 282 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 PELOQ9BRX2 385 aaKnown RBP1.81□□□□□ -2.12
SRP54-204ENST00000553923 TMEM59Q9BXS4 323 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 BEX2Q9BXY8 128 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 HES7Q9BYE0 225 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 ACTR3CQ9C0K3 210 aaPredicted RBP1.81□□□□□ -2.12
SRP54-204ENST00000553923 ACTR6Q9GZN1 396 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 NAA50Q9GZZ1 169 aaKnown RBP1.81□□□□□ -2.12
SRP54-204ENST00000553923 NAT10Q9H0A0 1025 aaKnown RBP1.81□□□□□ -2.12
SRP54-204ENST00000553923 OR51M1Q9H341 326 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 TUBB1Q9H4B7 451 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 RANBP3Q9H6Z4 567 aaPredicted RBP1.81□□□□□ -2.12
SRP54-204ENST00000553923 MOB1AQ9H8S9 216 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 PANK3Q9H999 370 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 EML4Q9HC35 981 aaKnown RBP1.81□□□□□ -2.12
SRP54-204ENST00000553923 ANKHQ9HCJ1 492 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 VCX3AQ9NNX9 186 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 FGF20Q9NP95 211 aaPredicted RBP1.81□□□□□ -2.12
SRP54-204ENST00000553923 IL26Q9NPH9 171 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 ZNF302Q9NR11 478 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 ABCC13Q9NSE7 274 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 GPATCH2LQ9NWQ4 482 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 ADA2Q9NZK5 511 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 ABCD2Q9UBJ2 740 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 UXTQ9UBK9 157 aaPredicted RBP1.81□□□□□ -2.12
SRP54-204ENST00000553923 PRODH2Q9UF12 536 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 WARS2Q9UGM6 360 aaKnown RBP1.81□□□□□ -2.12
SRP54-204ENST00000553923 MUTYHQ9UIF7 546 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 ENPP5Q9UJA9 477 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 CELA1Q9UNI1 258 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 MRPS18CQ9Y3D5 142 aaKnown RBP1.81□□□□□ -2.12
SRP54-204ENST00000553923 RPL36Q9Y3U8 105 aaKnown RBP1.81□□□□□ -2.12
SRP54-204ENST00000553923 CPQQ9Y646 472 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 METP08581 1390 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 KCNE1BA0A087WTH5 132 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 IGKV6D-21A0A0A0MT36 114 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 TRBV5-4A0A0C4DH59 114 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 C1orf232A0A0U1RR37 186 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 A0A1B0GW55 424 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 ZNF99A8MXY4 864 aaPredicted RBP1.8□□□□□ -2.12
SRP54-204ENST00000553923 E9PLD3 99 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 K7EQD1 137 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 SULT2B1O00204 365 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 SLC9A3R1O14745 358 aaPredicted RBP1.8□□□□□ -2.12
SRP54-204ENST00000553923 CDK14O94921 469 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 IGHG3P01860 377 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 HLA-HP01893 362 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 ALDOBP05062 364 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 SERPINA5P05154 406 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 HOXD4P09016 255 aaPredicted RBP1.8□□□□□ -2.12
SRP54-204ENST00000553923 DUX4L2P0CJ85 424 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 DUX4L3P0CJ86 424 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 DUX4L5P0CJ88 424 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 DUX4L6P0CJ89 424 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 DUX4L7P0CJ90 424 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 PVRP15151 417 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 COX5AP20674 150 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 SYT1P21579 422 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 SPRP35270 261 aaPredicted RBP1.8□□□□□ -2.12
SRP54-204ENST00000553923 UGT2B10P36537 528 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 ELK3P41970 407 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 NPBWR2P48146 333 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 RAB7AP51149 207 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 ATP4BP51164 291 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 KPNA2P52292 529 aaKnown RBP1.8□□□□□ -2.12
SRP54-204ENST00000553923 MYL6P60660 151 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 ATP6V0D1P61421 351 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 RND3P61587 244 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 RPS15AP62244 130 aaKnown RBP1.8□□□□□ -2.12
SRP54-204ENST00000553923 ACTA2P62736 377 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 ACTG2P63267 376 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 ACTC1P68032 377 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 ACTA1P68133 377 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 CYCSP99999 105 aaKnown RBP1.8□□□□□ -2.12
SRP54-204ENST00000553923 ZFP36L1Q07352 338 aaKnown RBP1.8□□□□□ -2.12
SRP54-204ENST00000553923 SLC10A7Q0GE19 358 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 ECH1Q13011 328 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 PMS2P3Q13401 168 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 GRB7Q14451 532 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 GNMTQ14749 295 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 SF3A2Q15428 464 aaKnown RBP1.8□□□□□ -2.12
SRP54-204ENST00000553923 MAPRE2Q15555 327 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 PSMD5Q16401 504 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 UPP1Q16831 310 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 ISXQ2M1V0 245 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 HSDL1Q3SXM5 330 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 C14orf28Q4W4Y0 310 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 PAGE2BQ5JRK9 111 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 PVRIGQ6DKI7 326 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 ADNP2Q6IQ32 1131 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 KRTAP5-7Q6L8G8 165 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 DUX4L9Q6RFH8 374 aaPredicted RBP1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms