RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 H3BML4 177 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 DLGAP1O14490 977 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 ADAM10O14672 748 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 TFECO14948 347 aaPredicted RBP4.49□□□□□ -1.69
VTI1B-202ENST00000553619 ARPC3O15145 178 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 RNF13O43567 381 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 AHCYL1O43865 530 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 PIP5K1CO60331 668 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 MRPS14O60783 128 aaKnown RBP4.49□□□□□ -1.69
VTI1B-202ENST00000553619 TNFAIP8O95379 198 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 SYNGR4O95473 234 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 F10P00742 488 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 KNG1P01042 644 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 BGLAPP02818 100 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 CCDC159P0C7I6 412 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 ASAH2BP0C7U1 165 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 ADORA3P0DMS8 318 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 NR2C1P13056 603 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 APEHP13798 732 aaKnown RBP4.49□□□□□ -1.69
VTI1B-202ENST00000553619 PAX7P23759 505 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 GPR4P46093 362 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 CENPAP49450 140 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 CHN2P52757 468 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 CARD18P57730 90 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 CTXN1P60606 82 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 SNRPGP62308 76 aaKnown RBP4.49□□□□□ -1.69
VTI1B-202ENST00000553619 CXADRP78310 365 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 EGR4Q05215 589 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 LGALS3BPQ08380 585 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 FOXO1Q12778 655 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 FOXF1Q12946 379 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 OR7A5Q15622 319 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 INPP5JQ15735 1006 aaPredicted RBP4.49□□□□□ -1.69
VTI1B-202ENST00000553619 SGCBQ16585 318 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 KLHL22Q53GT1 634 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 KRTCAP3Q53RY4 240 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 ALG10Q5BKT4 473 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 SLC25A30Q5SVS4 291 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 FAM205BPQ63HN1 556 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 ARHGAP11AQ6P4F7 1023 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 WDR88Q6ZMY6 472 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 ZNF620Q6ZNG0 422 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 Q6ZS92 163 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 ASB18Q6ZVZ8 466 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 SPATC1Q76KD6 591 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 YRDCQ86U90 279 aaKnown RBP4.49□□□□□ -1.69
VTI1B-202ENST00000553619 PM20D2Q8IYS1 436 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 LNX2Q8N448 690 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 TMEM251Q8N6I4 163 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 ADPRHL1Q8NDY3 354 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 RHOXF1Q8NHV9 184 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 FAM81AQ8TBF8 368 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 FANK1Q8TC84 345 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 FNDC8Q8TC99 324 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 HDAC2Q92769 488 aaKnown RBP4.49□□□□□ -1.69
VTI1B-202ENST00000553619 RFKQ969G6 155 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 ABTB1Q969K4 478 aaPredicted RBP4.49□□□□□ -1.69
VTI1B-202ENST00000553619 CPNE4Q96A23 557 aaPredicted RBP4.49□□□□□ -1.69
VTI1B-202ENST00000553619 MIB2Q96AX9 1013 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 SARAFQ96BY9 339 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 KTI12Q96EK9 354 aaPredicted RBP4.49□□□□□ -1.69
VTI1B-202ENST00000553619 AJUBAQ96IF1 538 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 SAMD8Q96LT4 415 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 KLHL15Q96M94 604 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 WWC2-AS2Q96NR7 200 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 OXGR1Q96P68 337 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 ERMAPQ96PL5 475 aaPredicted RBP4.49□□□□□ -1.69
VTI1B-202ENST00000553619 OR5B2Q96R09 309 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 MBOAT4Q96T53 435 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 PITX2Q99697 317 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 POLDIP3Q9BY77 421 aaKnown RBP4.49□□□□□ -1.69
VTI1B-202ENST00000553619 MEGF9Q9H1U4 602 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 UBQLN3Q9H347 655 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 CHST11Q9NPF2 352 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 FANCFQ9NPI8 374 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 INIPQ9NRY2 104 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 DEPPQ9NTK1 212 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 C20orf141Q9NUB4 165 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 PLCXD1Q9NUJ7 323 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 ALKBH4Q9NXW9 302 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 TVP23BQ9NYZ1 205 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 GRHPRQ9UBQ7 328 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 RASD1Q9Y272 281 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 RPL36Q9Y3U8 105 aaKnown RBP4.49□□□□□ -1.69
VTI1B-202ENST00000553619 PCDHGB1Q9Y5G3 927 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 NOX1Q9Y5S8 564 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 PCSK5Q92824 1860 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 IGKV1D-42A0A075B6H8 117 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 TRAV27A0A087WT01 109 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 A0A087WXM4 84 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 LOC102725191A0A1B0GVB3 256 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 A6NIZ1 184 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 NPIPB13A6NJU9 1138 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 LRRC3CA6NJW4 275 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 LIPT2A6NK58 231 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 ZNF726A6NNF4 738 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 RIIAD1A6NNX1 92 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 FAM166BA8MTA8 275 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 NPIPB4C9JG80 1138 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 MCIDASD6RGH6 385 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms